RNA–Protein interactions for RNA: ENST00000628477.2

DDX46-212, Transcript of DEAD-box helicase 46, humanhuman

TSL 5 BASIC

Gene DDX46, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX46-212ENST00000628477 ZBED9Q6R2W3 1325 aa18.53■□□□□ 0.56
DDX46-212ENST00000628477 C19orf44Q9H6X5 657 aa18.53■□□□□ 0.56
DDX46-212ENST00000628477 WDR43Q15061 677 aaKnown RBP eCLIP18.52■□□□□ 0.56
DDX46-212ENST00000628477 TMEM94Q12767 1356 aa18.52■□□□□ 0.56
DDX46-212ENST00000628477 NCOA3Q9Y6Q9 1424 aa18.51■□□□□ 0.55
DDX46-212ENST00000628477 SCAF1Q9H7N4 1312 aaKnown RBP18.51■□□□□ 0.55
DDX46-212ENST00000628477 BLMP54132 1417 aaPredicted RBP18.51■□□□□ 0.55
DDX46-212ENST00000628477 PHF8Q9UPP1 1060 aa18.51■□□□□ 0.55
DDX46-212ENST00000628477 COG3Q96JB2 828 aa18.5■□□□□ 0.55
DDX46-212ENST00000628477 TTC21AQ8NDW8 1320 aa18.49■□□□□ 0.55
DDX46-212ENST00000628477 CFAP53Q96M91 514 aa18.49■□□□□ 0.55
DDX46-212ENST00000628477 SENP3-EIF4A1A0A087X0R7 540 aa18.48■□□□□ 0.55
DDX46-212ENST00000628477 FBLN1P23142 703 aa18.48■□□□□ 0.55
DDX46-212ENST00000628477 ESCO1Q5FWF5 840 aa18.48■□□□□ 0.55
DDX46-212ENST00000628477 POLKQ9UBT6 870 aa18.47■□□□□ 0.55
DDX46-212ENST00000628477 ZNF335Q9H4Z2 1342 aaPredicted RBP18.46■□□□□ 0.55
DDX46-212ENST00000628477 SHPRHQ149N8 1683 aa18.46■□□□□ 0.55
DDX46-212ENST00000628477 AATKQ6ZMQ8 1374 aa18.46■□□□□ 0.55
DDX46-212ENST00000628477 ORAI2Q96SN7 254 aa18.46■□□□□ 0.55
DDX46-212ENST00000628477 OVOS2A0A0J9YW53 1432 aa18.46■□□□□ 0.54
DDX46-212ENST00000628477 OVOS2Q6IE36 1432 aa18.46■□□□□ 0.54
DDX46-212ENST00000628477 PNPLA6Q8IY17 1366 aa18.45■□□□□ 0.54
DDX46-212ENST00000628477 DCCP43146 1447 aa18.45■□□□□ 0.54
DDX46-212ENST00000628477 C1orf167Q5SNV9 1468 aa18.45■□□□□ 0.54
DDX46-212ENST00000628477 ATF3P18847 181 aa18.44■□□□□ 0.54
DDX46-212ENST00000628477 DMRT2Q9Y5R5 561 aa18.44■□□□□ 0.54
DDX46-212ENST00000628477 COL3A1P02461 1466 aaPredicted RBP18.44■□□□□ 0.54
DDX46-212ENST00000628477 MAP2P11137 1827 aaKnown RBP18.43■□□□□ 0.54
DDX46-212ENST00000628477 USP31Q70CQ4 1352 aa18.43■□□□□ 0.54
DDX46-212ENST00000628477 LRRC7Q96NW7 1537 aa18.42■□□□□ 0.54
DDX46-212ENST00000628477 XIRP1Q702N8 1843 aaKnown RBP18.42■□□□□ 0.54
DDX46-212ENST00000628477 MST1RQ04912 1400 aa18.42■□□□□ 0.54
DDX46-212ENST00000628477 EMILIN1Q9Y6C2 1016 aa18.42■□□□□ 0.54
DDX46-212ENST00000628477 PIK3C2AO00443 1686 aa18.41■□□□□ 0.54
DDX46-212ENST00000628477 SMG6Q86US8 1419 aaKnown RBP18.41■□□□□ 0.54
DDX46-212ENST00000628477 PSME1Q06323 249 aa18.41■□□□□ 0.54
DDX46-212ENST00000628477 CADPS2Q86UW7 1296 aa18.41■□□□□ 0.54
DDX46-212ENST00000628477 MSH6P52701 1360 aa18.41■□□□□ 0.54
DDX46-212ENST00000628477 PPM1GO15355 546 aaPredicted RBP18.4■□□□□ 0.54
DDX46-212ENST00000628477 RRS1Q15050 365 aaKnown RBP18.4■□□□□ 0.54
DDX46-212ENST00000628477 CCDC146Q8IYE0 955 aa18.4■□□□□ 0.54
DDX46-212ENST00000628477 FOXO3O43524 673 aa18.39■□□□□ 0.53
DDX46-212ENST00000628477 PAK3O75914 559 aaPredicted RBP18.39■□□□□ 0.53
DDX46-212ENST00000628477 SALL2Q9Y467 1007 aaPredicted RBP18.39■□□□□ 0.53
DDX46-212ENST00000628477 DIAPH1O60610 1272 aaKnown RBP18.38■□□□□ 0.53
DDX46-212ENST00000628477 NLRP6P59044 892 aa18.38■□□□□ 0.53
DDX46-212ENST00000628477 NUDCQ9Y266 331 aa18.38■□□□□ 0.53
DDX46-212ENST00000628477 ABTB2Q8N961 1025 aa18.38■□□□□ 0.53
DDX46-212ENST00000628477 CDK12Q9NYV4 1490 aaPredicted RBP18.37■□□□□ 0.53
DDX46-212ENST00000628477 U2AF1L5P0DN76 240 aaPredicted RBP18.37■□□□□ 0.53
DDX46-212ENST00000628477 U2AF1Q01081 240 aaKnown RBP eCLIP18.37■□□□□ 0.536e-7■■■■■ 28.7
DDX46-212ENST00000628477 KIF1AQ12756 1690 aa18.36■□□□□ 0.53
DDX46-212ENST00000628477 NUTM2GQ5VZR2 741 aa18.36■□□□□ 0.53
DDX46-212ENST00000628477 GTF3C3Q9Y5Q9 886 aa18.36■□□□□ 0.53
DDX46-212ENST00000628477 USP54Q70EL1 1684 aa18.36■□□□□ 0.53
DDX46-212ENST00000628477 APAF1O14727 1248 aa18.35■□□□□ 0.53
DDX46-212ENST00000628477 RUNDC1Q96C34 613 aa18.35■□□□□ 0.53
DDX46-212ENST00000628477 MARF1Q9Y4F3 1742 aaKnown RBP18.35■□□□□ 0.53
DDX46-212ENST00000628477 U2SURPO15042 1029 aaKnown RBP18.34■□□□□ 0.53
DDX46-212ENST00000628477 XPCQ01831 940 aaPredicted RBP18.34■□□□□ 0.53
DDX46-212ENST00000628477 SOX12O15370 315 aa18.34■□□□□ 0.53
DDX46-212ENST00000628477 IL13P35225 146 aa18.34■□□□□ 0.53
DDX46-212ENST00000628477 KRT28Q7Z3Y7 464 aa18.34■□□□□ 0.53
DDX46-212ENST00000628477 PDE3BQ13370 1112 aa18.32■□□□□ 0.52
DDX46-212ENST00000628477 MAP3K19Q56UN5 1328 aa18.31■□□□□ 0.52
DDX46-212ENST00000628477 PEAK1Q9H792 1746 aa18.31■□□□□ 0.52
DDX46-212ENST00000628477 TRPM3Q9HCF6 1732 aaPredicted RBP18.31■□□□□ 0.52
DDX46-212ENST00000628477 ZNF521Q96K83 1311 aa18.31■□□□□ 0.52
DDX46-212ENST00000628477 NGEFQ8N5V2 710 aa18.3■□□□□ 0.52
DDX46-212ENST00000628477 PLEKHF1Q96S99 279 aa18.3■□□□□ 0.52
DDX46-212ENST00000628477 IQSEC2Q5JU85 1478 aa18.29■□□□□ 0.52
DDX46-212ENST00000628477 TCP11L2Q8N4U5 519 aa18.29■□□□□ 0.52
DDX46-212ENST00000628477 DDX17Q92841 729 aaKnown RBP18.29■□□□□ 0.52
DDX46-212ENST00000628477 CDCA7LQ96GN5 454 aa18.29■□□□□ 0.52
DDX46-212ENST00000628477 SLAIN2Q9P270 581 aa18.29■□□□□ 0.52
DDX46-212ENST00000628477 FCHSD2O94868 740 aa18.28■□□□□ 0.52
DDX46-212ENST00000628477 HSP90AB2PQ58FF8 381 aa18.28■□□□□ 0.52
DDX46-212ENST00000628477 SBNO1A3KN83 1393 aa18.28■□□□□ 0.52
DDX46-212ENST00000628477 EIF4A2Q14240 407 aaKnown RBP18.27■□□□□ 0.52
DDX46-212ENST00000628477 BRINP3Q76B58 766 aa18.27■□□□□ 0.52
DDX46-212ENST00000628477 NPHP3Q7Z494 1330 aa18.27■□□□□ 0.51
DDX46-212ENST00000628477 FLT4P35916 1363 aa18.26■□□□□ 0.51
DDX46-212ENST00000628477 AMPHP49418 695 aa18.25■□□□□ 0.51
DDX46-212ENST00000628477 RSPH6AQ9H0K4 717 aa18.25■□□□□ 0.51
DDX46-212ENST00000628477 PNNQ9H307 717 aaKnown RBP18.25■□□□□ 0.51
DDX46-212ENST00000628477 NFAT5O94916 1531 aa18.25■□□□□ 0.51
DDX46-212ENST00000628477 LMOD2Q6P5Q4 547 aa18.25■□□□□ 0.51
DDX46-212ENST00000628477 RRP7AQ9Y3A4 280 aaKnown RBP18.25■□□□□ 0.51
DDX46-212ENST00000628477 SUPT16HQ9Y5B9 1047 aaKnown RBP18.25■□□□□ 0.51
DDX46-212ENST00000628477 KIF24Q5T7B8 1368 aa18.24■□□□□ 0.51
DDX46-212ENST00000628477 NCBP3Q53F19 620 aaKnown RBP18.24■□□□□ 0.51
DDX46-212ENST00000628477 KCNH5Q8NCM2 988 aa18.24■□□□□ 0.51
DDX46-212ENST00000628477 PXDNQ92626 1479 aa18.24■□□□□ 0.51
DDX46-212ENST00000628477 ALS2Q96Q42 1657 aa18.23■□□□□ 0.51
DDX46-212ENST00000628477 HMOX1P09601 288 aa18.23■□□□□ 0.51
DDX46-212ENST00000628477 GOLGA2Q08379 1002 aa18.23■□□□□ 0.51
DDX46-212ENST00000628477 NEUROD2Q15784 382 aa18.23■□□□□ 0.51
DDX46-212ENST00000628477 WWC1Q8IX03 1113 aa18.23■□□□□ 0.51
DDX46-212ENST00000628477 PHF23Q9BUL5 403 aaPredicted RBP18.23■□□□□ 0.51
DDX46-212ENST00000628477 USP19O94966 1318 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms