RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 UBAP1LF5GYI3 381 aa11.49□□□□□ -0.57
TCF4-260ENST00000627685 KCNA6P17658 529 aa11.49□□□□□ -0.57
TCF4-260ENST00000627685 NUTM2DQ5VT03 806 aaPredicted RBP11.49□□□□□ -0.57
TCF4-260ENST00000627685 TBX22Q9Y458 520 aa11.49□□□□□ -0.57
TCF4-260ENST00000627685 ANKRD30BQ9BXX2 1392 aa11.48□□□□□ -0.57
TCF4-260ENST00000627685 NALCNQ8IZF0 1738 aa11.47□□□□□ -0.57
TCF4-260ENST00000627685 PIK3C2GO75747 1445 aa11.47□□□□□ -0.57
TCF4-260ENST00000627685 TOM1O60784 492 aa11.46□□□□□ -0.57
TCF4-260ENST00000627685 HDGFP51858 240 aaKnown RBP11.46□□□□□ -0.57
TCF4-260ENST00000627685 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.46□□□□□ -0.57
TCF4-260ENST00000627685 TRIM52Q96A61 297 aa11.46□□□□□ -0.57
TCF4-260ENST00000627685 RBM33Q96EV2 1170 aaKnown RBP11.46□□□□□ -0.57
TCF4-260ENST00000627685 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.46□□□□□ -0.57
TCF4-260ENST00000627685 MYOM2P54296 1465 aa11.45□□□□□ -0.58
TCF4-260ENST00000627685 CCDC144AA2RUR9 1427 aa11.45□□□□□ -0.58
TCF4-260ENST00000627685 ST18O60284 1047 aa11.45□□□□□ -0.58
TCF4-260ENST00000627685 LCE2DQ5TA82 110 aaPredicted RBP11.45□□□□□ -0.58
TCF4-260ENST00000627685 TMC2Q8TDI7 906 aa11.45□□□□□ -0.58
TCF4-260ENST00000627685 PTCH1Q13635 1447 aa11.44□□□□□ -0.58
TCF4-260ENST00000627685 NCOA3Q9Y6Q9 1424 aa11.44□□□□□ -0.58
TCF4-260ENST00000627685 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.44□□□□□ -0.58
TCF4-260ENST00000627685 ROBO1Q9Y6N7 1651 aa11.44□□□□□ -0.58
TCF4-260ENST00000627685 C2orf72A6NCS6 295 aa11.44□□□□□ -0.58
TCF4-260ENST00000627685 ADGRF5Q8IZF2 1346 aa11.43□□□□□ -0.58
TCF4-260ENST00000627685 TECPR2O15040 1411 aa11.43□□□□□ -0.58
TCF4-260ENST00000627685 FAM135BQ49AJ0 1406 aa11.43□□□□□ -0.58
TCF4-260ENST00000627685 ROBO2Q9HCK4 1378 aa11.42□□□□□ -0.58
TCF4-260ENST00000627685 ADGRB1O14514 1584 aa11.42□□□□□ -0.58
TCF4-260ENST00000627685 HRCP23327 699 aa11.42□□□□□ -0.58
TCF4-260ENST00000627685 HSPA1LP34931 641 aa11.42□□□□□ -0.58
TCF4-260ENST00000627685 KNDC1Q76NI1 1749 aa11.42□□□□□ -0.58
TCF4-260ENST00000627685 COL16A1Q07092 1604 aaPredicted RBP11.42□□□□□ -0.58
TCF4-260ENST00000627685 MED1Q15648 1581 aaPredicted RBP11.41□□□□□ -0.58
TCF4-260ENST00000627685 PPP1R15AO75807 674 aaPredicted RBP11.41□□□□□ -0.58
TCF4-260ENST00000627685 HOXB3P14651 431 aaPredicted RBP11.41□□□□□ -0.58
TCF4-260ENST00000627685 DCCP43146 1447 aa11.41□□□□□ -0.58
TCF4-260ENST00000627685 ADGRL3Q9HAR2 1447 aa11.41□□□□□ -0.58
TCF4-260ENST00000627685 DHX57Q6P158 1386 aaKnown RBP11.41□□□□□ -0.58
TCF4-260ENST00000627685 RPGRIP1LQ68CZ1 1315 aa11.4□□□□□ -0.58
TCF4-260ENST00000627685 KIF3CO14782 793 aa11.4□□□□□ -0.58
TCF4-260ENST00000627685 DOK7Q18PE1 504 aa11.4□□□□□ -0.58
TCF4-260ENST00000627685 ZNF710Q8N1W2 664 aa11.4□□□□□ -0.58
TCF4-260ENST00000627685 SPRYD3Q8NCJ5 442 aa11.4□□□□□ -0.58
TCF4-260ENST00000627685 MST1RQ04912 1400 aa11.4□□□□□ -0.58
TCF4-260ENST00000627685 LAMC1P11047 1609 aa11.39□□□□□ -0.59
TCF4-260ENST00000627685 AHDC1Q5TGY3 1603 aaPredicted RBP11.39□□□□□ -0.59
TCF4-260ENST00000627685 POTEMA6NI47 508 aa11.39□□□□□ -0.59
TCF4-260ENST00000627685 POTEGQ6S5H5 508 aa11.39□□□□□ -0.59
TCF4-260ENST00000627685 PAXIP1Q6ZW49 1069 aaPredicted RBP11.38□□□□□ -0.59
TCF4-260ENST00000627685 CFAP44Q96MT7 982 aa11.38□□□□□ -0.59
TCF4-260ENST00000627685 AMOTL2Q9Y2J4 779 aa11.38□□□□□ -0.59
TCF4-260ENST00000627685 CDC42BPGQ6DT37 1551 aa11.37□□□□□ -0.59
TCF4-260ENST00000627685 PIP4K2BP78356 416 aa11.37□□□□□ -0.59
TCF4-260ENST00000627685 ZNF326Q5BKZ1 582 aaKnown RBP11.37□□□□□ -0.59
TCF4-260ENST00000627685 PROSER2Q86WR7 435 aaPredicted RBP11.37□□□□□ -0.59
TCF4-260ENST00000627685 NHSL1Q5SYE7 1610 aa11.37□□□□□ -0.59
TCF4-260ENST00000627685 ACIN1Q9UKV3 1341 aaKnown RBP11.35□□□□□ -0.59
TCF4-260ENST00000627685 RIMBP2O15034 1052 aa11.35□□□□□ -0.59
TCF4-260ENST00000627685 GPHNQ9NQX3 736 aaPredicted RBP11.35□□□□□ -0.59
TCF4-260ENST00000627685 LRPPRCP42704 1394 aaKnown RBP11.35□□□□□ -0.59
TCF4-260ENST00000627685 MSH6P52701 1360 aa11.35□□□□□ -0.59
TCF4-260ENST00000627685 PLEKHH1Q9ULM0 1364 aa11.35□□□□□ -0.59
TCF4-260ENST00000627685 MARVELD3Q96A59 401 aa11.34□□□□□ -0.59
TCF4-260ENST00000627685 BCANQ96GW7 911 aa11.34□□□□□ -0.59
TCF4-260ENST00000627685 DLC1Q96QB1 1528 aa11.33□□□□□ -0.6
TCF4-260ENST00000627685 YTHDC2Q9H6S0 1430 aaKnown RBP11.33□□□□□ -0.6
TCF4-260ENST00000627685 LRP6O75581 1613 aa11.32□□□□□ -0.6
TCF4-260ENST00000627685 ABCC11Q96J66 1382 aa11.32□□□□□ -0.6
TCF4-260ENST00000627685 DISP3Q9P2K9 1392 aa11.32□□□□□ -0.6
TCF4-260ENST00000627685 RGL3Q3MIN7 710 aa11.32□□□□□ -0.6
TCF4-260ENST00000627685 ADGRB2O60241 1585 aa11.32□□□□□ -0.6
TCF4-260ENST00000627685 C1orf167Q5SNV9 1468 aa11.32□□□□□ -0.6
TCF4-260ENST00000627685 C19orf44Q9H6X5 657 aa11.31□□□□□ -0.6
TCF4-260ENST00000627685 C14orf93Q9H972 538 aaKnown RBP11.31□□□□□ -0.6
TCF4-260ENST00000627685 PHLPP1O60346 1717 aa11.31□□□□□ -0.6
TCF4-260ENST00000627685 USP32Q8NFA0 1604 aa11.31□□□□□ -0.6
TCF4-260ENST00000627685 FMN2Q9NZ56 1722 aa11.3□□□□□ -0.6
TCF4-260ENST00000627685 PDE4AP27815 886 aa11.3□□□□□ -0.6
TCF4-260ENST00000627685 DSG2Q14126 1118 aa11.3□□□□□ -0.6
TCF4-260ENST00000627685 ILDR2Q71H61 639 aa11.3□□□□□ -0.6
TCF4-260ENST00000627685 BRINP3Q76B58 766 aa11.3□□□□□ -0.6
TCF4-260ENST00000627685 PLPP6Q8IY26 295 aa11.3□□□□□ -0.6
TCF4-260ENST00000627685 CRISPLD2Q9H0B8 497 aa11.3□□□□□ -0.6
TCF4-260ENST00000627685 SLAIN2Q9P270 581 aa11.3□□□□□ -0.6
TCF4-260ENST00000627685 SHPRHQ149N8 1683 aa11.3□□□□□ -0.6
TCF4-260ENST00000627685 FOXK1P85037 733 aa11.29□□□□□ -0.6
TCF4-260ENST00000627685 CADPS2Q86UW7 1296 aa11.29□□□□□ -0.6
TCF4-260ENST00000627685 HOXB1P14653 301 aaPredicted RBP11.28□□□□□ -0.6
TCF4-260ENST00000627685 EMP3P54852 163 aa11.28□□□□□ -0.6
TCF4-260ENST00000627685 CFAP70Q5T0N1 1121 aa11.28□□□□□ -0.6
TCF4-260ENST00000627685 TMEM132EQ6IEE7 984 aa11.28□□□□□ -0.6
TCF4-260ENST00000627685 LARP6Q9BRS8 491 aaKnown RBP11.28□□□□□ -0.6
TCF4-260ENST00000627685 ZSWIM6Q9HCJ5 1215 aa11.28□□□□□ -0.6
TCF4-260ENST00000627685 ARHGEF28Q8N1W1 1705 aaKnown RBP11.28□□□□□ -0.6
TCF4-260ENST00000627685 PXDNQ92626 1479 aa11.27□□□□□ -0.6
TCF4-260ENST00000627685 ARSIQ5FYB1 569 aa11.27□□□□□ -0.61
TCF4-260ENST00000627685 KIAA1210Q9ULL0 1709 aa11.26□□□□□ -0.61
TCF4-260ENST00000627685 RGS17Q9UGC6 210 aaPredicted RBP11.26□□□□□ -0.61
TCF4-260ENST00000627685 GPR153Q6NV75 609 aa11.25□□□□□ -0.61
TCF4-260ENST00000627685 PPP1R15BQ5SWA1 713 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms