RNA–Protein interactions for RNA: ENST00000626595.2

TCF4-255, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-255	ENST00000626595	CCDC125	Q86Z20	511 aa		11.29	□□□□□ -0.6
TCF4-255	ENST00000626595	BCAN	Q96GW7	911 aa		11.29	□□□□□ -0.6
TCF4-255	ENST00000626595	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.29	□□□□□ -0.6
TCF4-255	ENST00000626595	ABCC3	O15438	1527 aa		11.29	□□□□□ -0.6
TCF4-255	ENST00000626595	UBR1	Q8IWV7	1749 aa		11.29	□□□□□ -0.6
TCF4-255	ENST00000626595	NKTR	P30414	1462 aa	Known RBP	11.28	□□□□□ -0.6
TCF4-255	ENST00000626595	GPR153	Q6NV75	609 aa		11.28	□□□□□ -0.6
TCF4-255	ENST00000626595	DPYSL4	O14531	572 aa		11.27	□□□□□ -0.61
TCF4-255	ENST00000626595	TSPY4	P0CV99	314 aa		11.27	□□□□□ -0.61
TCF4-255	ENST00000626595	TSPY10	P0CW01	314 aa		11.27	□□□□□ -0.61
TCF4-255	ENST00000626595	C14orf37	Q86TY3	774 aa		11.27	□□□□□ -0.61
TCF4-255	ENST00000626595	TIAM1	Q13009	1591 aa		11.26	□□□□□ -0.61
TCF4-255	ENST00000626595	ST18	O60284	1047 aa		11.26	□□□□□ -0.61
TCF4-255	ENST00000626595	ATF3	P18847	181 aa		11.26	□□□□□ -0.61
TCF4-255	ENST00000626595	MTUS2	Q5JR59	1369 aa		11.26	□□□□□ -0.61
TCF4-255	ENST00000626595	TBC1D12	O60347	775 aa		11.25	□□□□□ -0.61
TCF4-255	ENST00000626595	HOXB1	P14653	301 aa	Predicted RBP	11.25	□□□□□ -0.61
TCF4-255	ENST00000626595	NEUROD1	Q13562	356 aa		11.25	□□□□□ -0.61
TCF4-255	ENST00000626595	ARSI	Q5FYB1	569 aa		11.25	□□□□□ -0.61
TCF4-255	ENST00000626595	LCE2D	Q5TA82	110 aa	Predicted RBP	11.25	□□□□□ -0.61
TCF4-255	ENST00000626595	ARHGEF1	Q92888	912 aa	Known RBP	11.25	□□□□□ -0.61
TCF4-255	ENST00000626595	FAM163A	Q96GL9	167 aa	Predicted RBP	11.25	□□□□□ -0.61
TCF4-255	ENST00000626595	C19orf44	Q9H6X5	657 aa		11.25	□□□□□ -0.61
TCF4-255	ENST00000626595	CCDC141	Q6ZP82	1450 aa		11.25	□□□□□ -0.61
TCF4-255	ENST00000626595	FYCO1	Q9BQS8	1478 aa		11.25	□□□□□ -0.61
TCF4-255	ENST00000626595	TET3	O43151	1660 aa		11.24	□□□□□ -0.61
TCF4-255	ENST00000626595	MAP3K9	P80192	1104 aa		11.24	□□□□□ -0.61
TCF4-255	ENST00000626595	DIEXF	Q68CQ4	756 aa	Known RBP	11.24	□□□□□ -0.61
TCF4-255	ENST00000626595	BRINP3	Q76B58	766 aa		11.24	□□□□□ -0.61
TCF4-255	ENST00000626595	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.24	□□□□□ -0.61	2e-6	■■■□□ 17.4
TCF4-255	ENST00000626595	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.24	□□□□□ -0.61
TCF4-255	ENST00000626595	SHPRH	Q149N8	1683 aa		11.24	□□□□□ -0.61
TCF4-255	ENST00000626595	IDI1	Q13907	227 aa		11.23	□□□□□ -0.61
TCF4-255	ENST00000626595	NCOA3	Q9Y6Q9	1424 aa		11.23	□□□□□ -0.61
TCF4-255	ENST00000626595	CCER1	Q8TC90	406 aa	Predicted RBP	11.22	□□□□□ -0.61
TCF4-255	ENST00000626595	LRRC59	Q96AG4	307 aa	Known RBP	11.22	□□□□□ -0.61
TCF4-255	ENST00000626595	NUDT7	P0C024	238 aa		11.21	□□□□□ -0.61
TCF4-255	ENST00000626595	PDIA6	Q15084	440 aa		11.21	□□□□□ -0.61
TCF4-255	ENST00000626595	TRPC5	Q9UL62	973 aa	Predicted RBP	11.21	□□□□□ -0.61
TCF4-255	ENST00000626595	NWD1	Q149M9	1564 aa		11.2	□□□□□ -0.62
TCF4-255	ENST00000626595	CAMSAP2	Q08AD1	1489 aa		11.2	□□□□□ -0.62
TCF4-255	ENST00000626595	ARHGAP31	Q2M1Z3	1444 aa		11.2	□□□□□ -0.62
TCF4-255	ENST00000626595	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.2	□□□□□ -0.62
TCF4-255	ENST00000626595	EVI5	O60447	810 aa		11.2	□□□□□ -0.62
TCF4-255	ENST00000626595	ADAMTS2	O95450	1211 aa		11.2	□□□□□ -0.62
TCF4-255	ENST00000626595	USP21	Q9UK80	565 aa		11.2	□□□□□ -0.62
TCF4-255	ENST00000626595	GTF3C3	Q9Y5Q9	886 aa		11.2	□□□□□ -0.62
TCF4-255	ENST00000626595	SETD5	Q9C0A6	1442 aa		11.19	□□□□□ -0.62
TCF4-255	ENST00000626595	DIP2A	Q14689	1571 aa		11.19	□□□□□ -0.62
TCF4-255	ENST00000626595	EFCAB6	Q5THR3	1501 aa		11.19	□□□□□ -0.62
TCF4-255	ENST00000626595	KDM5A	P29375	1690 aa	Known RBP	11.18	□□□□□ -0.62
TCF4-255	ENST00000626595	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.18	□□□□□ -0.62
TCF4-255	ENST00000626595	TBX22	Q9Y458	520 aa		11.17	□□□□□ -0.62
TCF4-255	ENST00000626595	YY1	P25490	414 aa		11.16	□□□□□ -0.62
TCF4-255	ENST00000626595	IFFO2	Q5TF58	517 aa		11.16	□□□□□ -0.62
TCF4-255	ENST00000626595	MARVELD3	Q96A59	401 aa		11.16	□□□□□ -0.62
TCF4-255	ENST00000626595	PIK3C2B	O00750	1634 aa		11.16	□□□□□ -0.62
TCF4-255	ENST00000626595	PNPLA6	Q8IY17	1366 aa		11.16	□□□□□ -0.62
TCF4-255	ENST00000626595	CLSPN	Q9HAW4	1339 aa		11.15	□□□□□ -0.62
TCF4-255	ENST00000626595	PPP1R15A	O75807	674 aa	Predicted RBP	11.15	□□□□□ -0.62
TCF4-255	ENST00000626595	HDGF	P51858	240 aa	Known RBP	11.15	□□□□□ -0.62
TCF4-255	ENST00000626595	EMP3	P54852	163 aa		11.15	□□□□□ -0.62
TCF4-255	ENST00000626595	DEFB132	Q7Z7B7	95 aa		11.15	□□□□□ -0.62
TCF4-255	ENST00000626595	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.15	□□□□□ -0.62
TCF4-255	ENST00000626595	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.15	□□□□□ -0.62
TCF4-255	ENST00000626595	EP400	Q96L91	3159 aa		11.14	□□□□□ -0.63
TCF4-255	ENST00000626595	CEP162	Q5TB80	1403 aa		11.14	□□□□□ -0.63
TCF4-255	ENST00000626595	MAST1	Q9Y2H9	1570 aa		11.14	□□□□□ -0.63
TCF4-255	ENST00000626595	PLEKHG1	Q9ULL1	1385 aa		11.14	□□□□□ -0.63
TCF4-255	ENST00000626595	MROH1	Q8NDA8	1641 aa		11.13	□□□□□ -0.63
TCF4-255	ENST00000626595	BLM	P54132	1417 aa	Predicted RBP	11.13	□□□□□ -0.63
TCF4-255	ENST00000626595	SF3B2	Q13435	895 aa	Known RBP	11.13	□□□□□ -0.63
TCF4-255	ENST00000626595	DDX17	Q92841	729 aa	Known RBP	11.13	□□□□□ -0.63
TCF4-255	ENST00000626595	SLC52A1	Q9NWF4	448 aa		11.13	□□□□□ -0.63
TCF4-255	ENST00000626595	LHX6	Q9UPM6	363 aa		11.13	□□□□□ -0.63
TCF4-255	ENST00000626595	PSD	A5PKW4	1024 aa	Predicted RBP	11.12	□□□□□ -0.63
TCF4-255	ENST00000626595	LRP5	O75197	1615 aa		11.12	□□□□□ -0.63
TCF4-255	ENST00000626595	ATRN	O75882	1429 aa		11.11	□□□□□ -0.63
TCF4-255	ENST00000626595	ASXL1	Q8IXJ9	1541 aa		11.11	□□□□□ -0.63
TCF4-255	ENST00000626595	CFAP65	Q6ZU64	1925 aa	Known RBP	11.11	□□□□□ -0.63
TCF4-255	ENST00000626595	EIF2AK4	Q9P2K8	1649 aa	Known RBP	11.1	□□□□□ -0.63
TCF4-255	ENST00000626595	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	11.1	□□□□□ -0.63
TCF4-255	ENST00000626595	ARHGEF5	Q12774	1597 aa		11.1	□□□□□ -0.63
TCF4-255	ENST00000626595	CEP152	O94986	1710 aa		11.09	□□□□□ -0.63
TCF4-255	ENST00000626595	SEMA3E	O15041	775 aa		11.09	□□□□□ -0.63
TCF4-255	ENST00000626595	PTGER2	P43116	358 aa		11.09	□□□□□ -0.63
TCF4-255	ENST00000626595	GJD4	Q96KN9	370 aa	Predicted RBP	11.09	□□□□□ -0.63
TCF4-255	ENST00000626595	AMOTL2	Q9Y2J4	779 aa		11.09	□□□□□ -0.63
TCF4-255	ENST00000626595	ERBB3	P21860	1342 aa		11.09	□□□□□ -0.63
TCF4-255	ENST00000626595	KANK1	Q14678	1352 aa		11.08	□□□□□ -0.64
TCF4-255	ENST00000626595	PIK3R4	Q99570	1358 aa		11.08	□□□□□ -0.64
TCF4-255	ENST00000626595	NBR1	Q14596	966 aa		11.08	□□□□□ -0.64
TCF4-255	ENST00000626595	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
TCF4-255	ENST00000626595	EHBP1L1	Q8N3D4	1523 aa		11.08	□□□□□ -0.64
TCF4-255	ENST00000626595	ZFYVE9	O95405	1425 aa		11.08	□□□□□ -0.64
TCF4-255	ENST00000626595	DCC	P43146	1447 aa		11.08	□□□□□ -0.64
TCF4-255	ENST00000626595	CHD2	O14647	1828 aa	Known RBP	11.07	□□□□□ -0.64
TCF4-255	ENST00000626595	DDX12P	Q92771	950 aa		11.07	□□□□□ -0.64
TCF4-255	ENST00000626595	MST1R	Q04912	1400 aa		11.07	□□□□□ -0.64
TCF4-255	ENST00000626595	RIMS2	Q9UQ26	1411 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms