RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 MARF1Q9Y4F3 1742 aaKnown RBP19.62■□□□□ 0.73
SNRPA1-216ENST00000626000 PAK3O75914 559 aaPredicted RBP19.61■□□□□ 0.73
SNRPA1-216ENST00000626000 USP6P35125 1406 aa19.6■□□□□ 0.73
SNRPA1-216ENST00000626000 EIF4G2P78344 907 aaKnown RBP eCLIP19.6■□□□□ 0.73
SNRPA1-216ENST00000626000 AKAP12Q02952 1782 aa19.59■□□□□ 0.73
SNRPA1-216ENST00000626000 TERF2IPQ9NYB0 399 aa19.58■□□□□ 0.72
SNRPA1-216ENST00000626000 ABCA3Q99758 1704 aa19.58■□□□□ 0.72
SNRPA1-216ENST00000626000 ADAMTS2O95450 1211 aa19.57■□□□□ 0.72
SNRPA1-216ENST00000626000 HDGFL2Q7Z4V5 671 aaPredicted RBP19.57■□□□□ 0.72
SNRPA1-216ENST00000626000 NGLY1Q96IV0 654 aa19.57■□□□□ 0.72
SNRPA1-216ENST00000626000 CPSF1Q10570 1443 aaKnown RBP19.57■□□□□ 0.72
SNRPA1-216ENST00000626000 TTC21AQ8NDW8 1320 aa19.56■□□□□ 0.72
SNRPA1-216ENST00000626000 C8orf37Q96NL8 207 aa19.56■□□□□ 0.72
SNRPA1-216ENST00000626000 MON2Q7Z3U7 1717 aa19.55■□□□□ 0.72
SNRPA1-216ENST00000626000 NLRP13Q86W25 1043 aa19.55■□□□□ 0.72
SNRPA1-216ENST00000626000 ABTB2Q8N961 1025 aa19.55■□□□□ 0.72
SNRPA1-216ENST00000626000 AFF2P51816 1311 aa19.54■□□□□ 0.72
SNRPA1-216ENST00000626000 TMC1Q8TDI8 760 aa19.54■□□□□ 0.72
SNRPA1-216ENST00000626000 KTN1Q86UP2 1357 aaKnown RBP19.54■□□□□ 0.72
SNRPA1-216ENST00000626000 SSH2Q76I76 1423 aa19.53■□□□□ 0.72
SNRPA1-216ENST00000626000 FNBP4Q8N3X1 1017 aaPredicted RBP19.53■□□□□ 0.72
SNRPA1-216ENST00000626000 CRYBG1Q9Y4K1 1723 aa19.52■□□□□ 0.72
SNRPA1-216ENST00000626000 NRKQ7Z2Y5 1582 aa19.52■□□□□ 0.71
SNRPA1-216ENST00000626000 RGS17Q9UGC6 210 aaPredicted RBP19.51■□□□□ 0.71
SNRPA1-216ENST00000626000 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.51■□□□□ 0.71
SNRPA1-216ENST00000626000 NWD2Q9ULI1 1742 aa19.51■□□□□ 0.71
SNRPA1-216ENST00000626000 PHRF1Q9P1Y6 1649 aaKnown RBP19.51■□□□□ 0.71
SNRPA1-216ENST00000626000 EDC4Q6P2E9 1401 aaKnown RBP19.51■□□□□ 0.71
SNRPA1-216ENST00000626000 USP19O94966 1318 aa19.5■□□□□ 0.71
SNRPA1-216ENST00000626000 USP21Q9UK80 565 aa19.49■□□□□ 0.71
SNRPA1-216ENST00000626000 COL14A1Q05707 1796 aaKnown RBP19.49■□□□□ 0.71
SNRPA1-216ENST00000626000 TTC21BQ7Z4L5 1316 aa19.49■□□□□ 0.71
SNRPA1-216ENST00000626000 ANKRD36BQ8N2N9 1353 aa19.48■□□□□ 0.71
SNRPA1-216ENST00000626000 CABLES1Q8TDN4 633 aa19.48■□□□□ 0.71
SNRPA1-216ENST00000626000 TRPC5Q9UL62 973 aaPredicted RBP19.48■□□□□ 0.71
SNRPA1-216ENST00000626000 CD163L1Q9NR16 1453 aa19.48■□□□□ 0.71
SNRPA1-216ENST00000626000 SLIT2O94813 1529 aa19.47■□□□□ 0.71
SNRPA1-216ENST00000626000 SLC12A5Q9H2X9 1139 aa19.47■□□□□ 0.71
SNRPA1-216ENST00000626000 CDK12Q9NYV4 1490 aaPredicted RBP19.47■□□□□ 0.71
SNRPA1-216ENST00000626000 PIK3C2AO00443 1686 aa19.46■□□□□ 0.71
SNRPA1-216ENST00000626000 A0A1W2PP64 1363 aa19.46■□□□□ 0.71
SNRPA1-216ENST00000626000 HSPA5P11021 654 aaKnown RBP19.46■□□□□ 0.71
SNRPA1-216ENST00000626000 NLRP6P59044 892 aa19.46■□□□□ 0.71
SNRPA1-216ENST00000626000 KCNH5Q8NCM2 988 aa19.46■□□□□ 0.71
SNRPA1-216ENST00000626000 CPDO75976 1380 aa19.45■□□□□ 0.7
SNRPA1-216ENST00000626000 RXRBP28702 533 aa19.45■□□□□ 0.7
SNRPA1-216ENST00000626000 POTEAQ6S8J7 498 aa19.45■□□□□ 0.7
SNRPA1-216ENST00000626000 PLCH1Q4KWH8 1693 aa19.45■□□□□ 0.7
SNRPA1-216ENST00000626000 USP54Q70EL1 1684 aa19.45■□□□□ 0.7
SNRPA1-216ENST00000626000 SLIT3O75094 1523 aa19.45■□□□□ 0.7
SNRPA1-216ENST00000626000 RBM6P78332 1123 aaKnown RBP19.44■□□□□ 0.7
SNRPA1-216ENST00000626000 UNC5CLQ8IV45 518 aa19.44■□□□□ 0.7
SNRPA1-216ENST00000626000 PRDM11Q9NQV5 511 aa19.44■□□□□ 0.7
SNRPA1-216ENST00000626000 USP31Q70CQ4 1352 aa19.44■□□□□ 0.7
SNRPA1-216ENST00000626000 BCL9LQ86UU0 1499 aa19.43■□□□□ 0.7
SNRPA1-216ENST00000626000 QTRT2Q9H974 415 aaKnown RBP19.43■□□□□ 0.7
SNRPA1-216ENST00000626000 ATRNO75882 1429 aa19.42■□□□□ 0.7
SNRPA1-216ENST00000626000 GCP02774 474 aa19.42■□□□□ 0.7
SNRPA1-216ENST00000626000 NUTM2GQ5VZR2 741 aa19.42■□□□□ 0.7
SNRPA1-216ENST00000626000 PLEKHG5O94827 1062 aa19.41■□□□□ 0.7
SNRPA1-216ENST00000626000 KIAA0232Q92628 1395 aa19.41■□□□□ 0.7
SNRPA1-216ENST00000626000 MYOM1P52179 1685 aa19.4■□□□□ 0.7
SNRPA1-216ENST00000626000 FAM83GA6ND36 823 aa19.39■□□□□ 0.69
SNRPA1-216ENST00000626000 ABCC6O95255 1503 aa19.39■□□□□ 0.69
SNRPA1-216ENST00000626000 VPS72Q15906 364 aa19.38■□□□□ 0.69
SNRPA1-216ENST00000626000 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.38■□□□□ 0.69
SNRPA1-216ENST00000626000 NRAPQ86VF7 1730 aa19.37■□□□□ 0.69
SNRPA1-216ENST00000626000 BTG4Q9NY30 223 aa19.37■□□□□ 0.69
SNRPA1-216ENST00000626000 AATKQ6ZMQ8 1374 aa19.36■□□□□ 0.69
SNRPA1-216ENST00000626000 ZC3H6P61129 1189 aaKnown RBP19.36■□□□□ 0.69
SNRPA1-216ENST00000626000 GJD4Q96KN9 370 aaPredicted RBP19.36■□□□□ 0.69
SNRPA1-216ENST00000626000 OVOS2A0A0J9YW53 1432 aa19.35■□□□□ 0.69
SNRPA1-216ENST00000626000 OVOS2Q6IE36 1432 aa19.35■□□□□ 0.69
SNRPA1-216ENST00000626000 NME9Q86XW9 330 aa19.34■□□□□ 0.69
SNRPA1-216ENST00000626000 COG3Q96JB2 828 aa19.34■□□□□ 0.69
SNRPA1-216ENST00000626000 LMO7Q8WWI1 1683 aa19.33■□□□□ 0.69
SNRPA1-216ENST00000626000 NFAT5O94916 1531 aa19.33■□□□□ 0.68
SNRPA1-216ENST00000626000 KIF20BQ96Q89 1820 aa19.32■□□□□ 0.68
SNRPA1-216ENST00000626000 POLR3GLQ9BT43 218 aa19.32■□□□□ 0.68
SNRPA1-216ENST00000626000 CCDC9Q9Y3X0 531 aaKnown RBP19.32■□□□□ 0.68
SNRPA1-216ENST00000626000 CGNL1Q0VF96 1302 aa19.31■□□□□ 0.68
SNRPA1-216ENST00000626000 ZEB1P37275 1124 aaPredicted RBP19.31■□□□□ 0.68
SNRPA1-216ENST00000626000 EVA1CP58658 441 aa19.31■□□□□ 0.68
SNRPA1-216ENST00000626000 ARHGEF25Q86VW2 580 aa19.31■□□□□ 0.68
SNRPA1-216ENST00000626000 CHRNA2Q15822 529 aa19.3■□□□□ 0.68
SNRPA1-216ENST00000626000 NSD3Q9BZ95 1437 aa19.3■□□□□ 0.68
SNRPA1-216ENST00000626000 GLI3P10071 1580 aa19.29■□□□□ 0.68
SNRPA1-216ENST00000626000 RGS12O14924 1447 aa19.29■□□□□ 0.68
SNRPA1-216ENST00000626000 CAMTA1Q9Y6Y1 1673 aa19.28■□□□□ 0.68
SNRPA1-216ENST00000626000 COL5A2P05997 1499 aaPredicted RBP19.28■□□□□ 0.68
SNRPA1-216ENST00000626000 SPATA31A5Q5VU36 1347 aa19.27■□□□□ 0.68
SNRPA1-216ENST00000626000 SPATA31A7Q8IWB4 1347 aa19.27■□□□□ 0.68
SNRPA1-216ENST00000626000 FYB1O15117 783 aa19.27■□□□□ 0.68
SNRPA1-216ENST00000626000 NSD2O96028 1365 aa19.27■□□□□ 0.68
SNRPA1-216ENST00000626000 LTN1O94822 1766 aa19.27■□□□□ 0.67
SNRPA1-216ENST00000626000 THRAP3Q9Y2W1 955 aaKnown RBP19.26■□□□□ 0.67
SNRPA1-216ENST00000626000 COL18A1P39060 1754 aa19.26■□□□□ 0.67
SNRPA1-216ENST00000626000 KIF7Q2M1P5 1343 aa19.25■□□□□ 0.67
SNRPA1-216ENST00000626000 BLMP54132 1417 aaPredicted RBP19.25■□□□□ 0.67
SNRPA1-216ENST00000626000 KIF24Q5T7B8 1368 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms