RNA–Protein interactions for RNA: ENST00000625521.2

UBAP1-204, Transcript of ubiquitin associated protein 1, humanhuman

TSL 2 BASIC

Gene UBAP1, Length 2,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-204ENST00000625521 ITSN1Q15811 1721 aa26.53■■□□□ 1.84
UBAP1-204ENST00000625521 RRP1P56182 461 aaKnown RBP26.52■■□□□ 1.84
UBAP1-204ENST00000625521 CHD2O14647 1828 aaKnown RBP26.52■■□□□ 1.84
UBAP1-204ENST00000625521 CCDC136Q96JN2 1154 aa26.5■■□□□ 1.83
UBAP1-204ENST00000625521 RCAN3Q9UKA8 241 aa26.5■■□□□ 1.83
UBAP1-204ENST00000625521 NGEFQ8N5V2 710 aa26.49■■□□□ 1.83
UBAP1-204ENST00000625521 CDCA7LQ96GN5 454 aa26.49■■□□□ 1.83
UBAP1-204ENST00000625521 ACEP12821 1306 aa26.48■■□□□ 1.83
UBAP1-204ENST00000625521 CCDC146Q8IYE0 955 aa26.48■■□□□ 1.83
UBAP1-204ENST00000625521 ANKARQ7Z5J8 1434 aa26.48■■□□□ 1.83
UBAP1-204ENST00000625521 NKTRP30414 1462 aaKnown RBP26.47■■□□□ 1.83
UBAP1-204ENST00000625521 NUTM2FA1L443 756 aa26.47■■□□□ 1.83
UBAP1-204ENST00000625521 NME9Q86XW9 330 aa26.46■■□□□ 1.83
UBAP1-204ENST00000625521 ZNF521Q96K83 1311 aa26.45■■□□□ 1.82
UBAP1-204ENST00000625521 COL3A1P02461 1466 aaPredicted RBP26.45■■□□□ 1.82
UBAP1-204ENST00000625521 USP6P35125 1406 aa26.44■■□□□ 1.82
UBAP1-204ENST00000625521 PNPLA6Q8IY17 1366 aa26.44■■□□□ 1.82
UBAP1-204ENST00000625521 APAF1O14727 1248 aa26.44■■□□□ 1.82
UBAP1-204ENST00000625521 COG3Q96JB2 828 aa26.44■■□□□ 1.82
UBAP1-204ENST00000625521 NRKQ7Z2Y5 1582 aa26.44■■□□□ 1.82
UBAP1-204ENST00000625521 RUNDC1Q96C34 613 aa26.43■■□□□ 1.82
UBAP1-204ENST00000625521 AATKQ6ZMQ8 1374 aa26.42■■□□□ 1.82
UBAP1-204ENST00000625521 TTC21BQ7Z4L5 1316 aa26.42■■□□□ 1.82
UBAP1-204ENST00000625521 FMN2Q9NZ56 1722 aa26.4■■□□□ 1.82
UBAP1-204ENST00000625521 POLKQ9UBT6 870 aa26.39■■□□□ 1.82
UBAP1-204ENST00000625521 EXOC6Q8TAG9 804 aa26.39■■□□□ 1.81
UBAP1-204ENST00000625521 SSH2Q76I76 1423 aa26.39■■□□□ 1.81
UBAP1-204ENST00000625521 NWD1Q149M9 1564 aa26.39■■□□□ 1.81
UBAP1-204ENST00000625521 U2AF1L5P0DN76 240 aaPredicted RBP26.38■■□□□ 1.81
UBAP1-204ENST00000625521 U2AF1Q01081 240 aaKnown RBP eCLIP26.38■■□□□ 1.81
UBAP1-204ENST00000625521 GOLGA2Q08379 1002 aa26.38■■□□□ 1.81
UBAP1-204ENST00000625521 NALCNQ8IZF0 1738 aa26.37■■□□□ 1.81
UBAP1-204ENST00000625521 ADGRL3Q9HAR2 1447 aa26.37■■□□□ 1.81
UBAP1-204ENST00000625521 DIAPH1O60610 1272 aaKnown RBP26.37■■□□□ 1.81
UBAP1-204ENST00000625521 ZRANB1Q9UGI0 708 aa26.37■■□□□ 1.81
UBAP1-204ENST00000625521 TTC21AQ8NDW8 1320 aa26.37■■□□□ 1.81
UBAP1-204ENST00000625521 NGDNQ8NEJ9 315 aaKnown RBP26.36■■□□□ 1.81
UBAP1-204ENST00000625521 PMFBP1Q8TBY8 1022 aa26.36■■□□□ 1.81
UBAP1-204ENST00000625521 IQSEC2Q5JU85 1478 aa26.35■■□□□ 1.81
UBAP1-204ENST00000625521 NCBP3Q53F19 620 aaKnown RBP26.34■■□□□ 1.81
UBAP1-204ENST00000625521 OVOS2A0A0J9YW53 1432 aa26.34■■□□□ 1.81
UBAP1-204ENST00000625521 OVOS2Q6IE36 1432 aa26.34■■□□□ 1.81
UBAP1-204ENST00000625521 CDK12Q9NYV4 1490 aaPredicted RBP26.33■■□□□ 1.81
UBAP1-204ENST00000625521 U2SURPO15042 1029 aaKnown RBP26.32■■□□□ 1.8
UBAP1-204ENST00000625521 TCP11L2Q8N4U5 519 aa26.32■■□□□ 1.8
UBAP1-204ENST00000625521 RGPD8O14715 1765 aaPredicted RBP26.31■■□□□ 1.8
UBAP1-204ENST00000625521 FBLN1P23142 703 aa26.31■■□□□ 1.8
UBAP1-204ENST00000625521 PPM1GO15355 546 aaPredicted RBP26.3■■□□□ 1.8
UBAP1-204ENST00000625521 SLFN5Q08AF3 891 aa26.3■■□□□ 1.8
UBAP1-204ENST00000625521 PNNQ9H307 717 aaKnown RBP26.3■■□□□ 1.8
UBAP1-204ENST00000625521 EMILIN1Q9Y6C2 1016 aa26.3■■□□□ 1.8
UBAP1-204ENST00000625521 DUSP27Q5VZP5 1158 aa26.29■■□□□ 1.8
UBAP1-204ENST00000625521 USP31Q70CQ4 1352 aa26.28■■□□□ 1.8
UBAP1-204ENST00000625521 MAP2P11137 1827 aaKnown RBP26.28■■□□□ 1.8
UBAP1-204ENST00000625521 E9PSI1 815 aa26.27■■□□□ 1.8
UBAP1-204ENST00000625521 CCDC27Q2M243 656 aa26.27■■□□□ 1.8
UBAP1-204ENST00000625521 WWC1Q8IX03 1113 aa26.27■■□□□ 1.8
UBAP1-204ENST00000625521 TRMT2AQ8IZ69 625 aaKnown RBP26.27■■□□□ 1.8
UBAP1-204ENST00000625521 RBM33Q96EV2 1170 aaKnown RBP26.27■■□□□ 1.8
UBAP1-204ENST00000625521 PHF23Q9BUL5 403 aaPredicted RBP26.27■■□□□ 1.8
UBAP1-204ENST00000625521 KDM4FA0A1W2PPD8 638 aa26.26■■□□□ 1.79
UBAP1-204ENST00000625521 PLEKHF1Q96S99 279 aa26.26■■□□□ 1.79
UBAP1-204ENST00000625521 C14orf37Q86TY3 774 aa26.26■■□□□ 1.79
UBAP1-204ENST00000625521 PHF8Q9UPP1 1060 aa26.25■■□□□ 1.79
UBAP1-204ENST00000625521 PLIN1O60240 522 aa26.24■■□□□ 1.79
UBAP1-204ENST00000625521 RRS1Q15050 365 aaKnown RBP26.24■■□□□ 1.79
UBAP1-204ENST00000625521 FCHSD2O94868 740 aa26.24■■□□□ 1.79
UBAP1-204ENST00000625521 PROSER2Q86WR7 435 aaPredicted RBP26.24■■□□□ 1.79
UBAP1-204ENST00000625521 MAPK8IP3Q9UPT6 1336 aa26.23■■□□□ 1.79
UBAP1-204ENST00000625521 RRP7AQ9Y3A4 280 aaKnown RBP26.22■■□□□ 1.79
UBAP1-204ENST00000625521 IL13P35225 146 aa26.22■■□□□ 1.79
UBAP1-204ENST00000625521 NEUROD2Q15784 382 aa26.22■■□□□ 1.79
UBAP1-204ENST00000625521 WDR63Q8IWG1 891 aa26.22■■□□□ 1.79
UBAP1-204ENST00000625521 SPINK5Q9NQ38 1064 aaPredicted RBP26.2■■□□□ 1.78
UBAP1-204ENST00000625521 PIK3C2AO00443 1686 aa26.19■■□□□ 1.78
UBAP1-204ENST00000625521 HSPA2P54652 639 aa26.19■■□□□ 1.78
UBAP1-204ENST00000625521 ESCO1Q5FWF5 840 aa26.17■■□□□ 1.78
UBAP1-204ENST00000625521 CRBNQ96SW2 442 aa26.17■■□□□ 1.78
UBAP1-204ENST00000625521 RSPH6AQ9H0K4 717 aa26.17■■□□□ 1.78
UBAP1-204ENST00000625521 LMTK3Q96Q04 1460 aa26.17■■□□□ 1.78
UBAP1-204ENST00000625521 DMRT2Q9Y5R5 561 aa26.17■■□□□ 1.78
UBAP1-204ENST00000625521 LRRC7Q96NW7 1537 aa26.16■■□□□ 1.78
UBAP1-204ENST00000625521 NCOA3Q9Y6Q9 1424 aa26.16■■□□□ 1.78
UBAP1-204ENST00000625521 TMPOP42166 694 aaKnown RBP26.16■■□□□ 1.78
UBAP1-204ENST00000625521 C19orf44Q9H6X5 657 aa26.16■■□□□ 1.78
UBAP1-204ENST00000625521 NEFMP07197 916 aa26.15■■□□□ 1.78
UBAP1-204ENST00000625521 USP54Q70EL1 1684 aa26.15■■□□□ 1.78
UBAP1-204ENST00000625521 NLRP6P59044 892 aa26.14■■□□□ 1.78
UBAP1-204ENST00000625521 PRKAR2BP31323 418 aa26.13■■□□□ 1.77
UBAP1-204ENST00000625521 C20orf194Q5TEA3 1177 aa26.13■■□□□ 1.77
UBAP1-204ENST00000625521 ABTB2Q8N961 1025 aa26.12■■□□□ 1.77
UBAP1-204ENST00000625521 TCERG1O14776 1098 aaKnown RBP26.11■■□□□ 1.77
UBAP1-204ENST00000625521 PAK3O75914 559 aaPredicted RBP26.11■■□□□ 1.77
UBAP1-204ENST00000625521 PSME1Q06323 249 aa26.1■■□□□ 1.77
UBAP1-204ENST00000625521 SBNO1A3KN83 1393 aa26.1■■□□□ 1.77
UBAP1-204ENST00000625521 MAP3K19Q56UN5 1328 aa26.1■■□□□ 1.77
UBAP1-204ENST00000625521 HMOX1P09601 288 aa26.1■■□□□ 1.77
UBAP1-204ENST00000625521 EIF4A2Q14240 407 aaKnown RBP26.1■■□□□ 1.77
UBAP1-204ENST00000625521 ERICH6Q7L0X2 663 aa26.1■■□□□ 1.77
UBAP1-204ENST00000625521 TMEM94Q12767 1356 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms