RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 FKBPLQ9UIM3 349 aa5.32□□□□□ -1.56
SCARNA4-202ENST00000625402 SERPINA10Q9UK55 444 aa5.32□□□□□ -1.56
SCARNA4-202ENST00000625402 WASHC4Q2M389 1173 aa5.31□□□□□ -1.56
SCARNA4-202ENST00000625402 HDGFL1Q5TGJ6 251 aa5.31□□□□□ -1.56
SCARNA4-202ENST00000625402 WWC1Q8IX03 1113 aa5.31□□□□□ -1.56
SCARNA4-202ENST00000625402 RNF166Q96A37 237 aaPredicted RBP5.31□□□□□ -1.56
SCARNA4-202ENST00000625402 ALG2Q9H553 416 aa5.31□□□□□ -1.56
SCARNA4-202ENST00000625402 S1PR4O95977 384 aa5.3□□□□□ -1.56
SCARNA4-202ENST00000625402 CTHP32929 405 aa5.3□□□□□ -1.56
SCARNA4-202ENST00000625402 MMRN1Q13201 1228 aa5.3□□□□□ -1.56
SCARNA4-202ENST00000625402 CFAP70Q5T0N1 1121 aa5.3□□□□□ -1.56
SCARNA4-202ENST00000625402 PTCRAQ6ISU1 281 aaPredicted RBP5.3□□□□□ -1.56
SCARNA4-202ENST00000625402 IL21Q9HBE4 155 aa5.3□□□□□ -1.56
SCARNA4-202ENST00000625402 EVA1BQ9NVM1 165 aa5.3□□□□□ -1.56
SCARNA4-202ENST00000625402 KCNH2Q12809 1159 aa5.29□□□□□ -1.56
SCARNA4-202ENST00000625402 NR1H3Q13133 447 aa5.29□□□□□ -1.56
SCARNA4-202ENST00000625402 SLC6A16Q9GZN6 736 aa5.29□□□□□ -1.56
SCARNA4-202ENST00000625402 ZBBXA8MT70 800 aa5.28□□□□□ -1.56
SCARNA4-202ENST00000625402 UNC93B1Q9H1C4 597 aa5.28□□□□□ -1.56
SCARNA4-202ENST00000625402 ZC3H4Q9UPT8 1303 aaKnown RBP5.27□□□□□ -1.57
SCARNA4-202ENST00000625402 PIK3CDO00329 1044 aa5.27□□□□□ -1.57
SCARNA4-202ENST00000625402 FCF1Q9Y324 198 aaKnown RBP5.27□□□□□ -1.57
SCARNA4-202ENST00000625402 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.26□□□□□ -1.57
SCARNA4-202ENST00000625402 PALM3A6NDB9 673 aaPredicted RBP5.26□□□□□ -1.57
SCARNA4-202ENST00000625402 ITGBL1O95965 494 aaPredicted RBP5.26□□□□□ -1.57
SCARNA4-202ENST00000625402 SH3BP5LQ7L8J4 393 aa5.26□□□□□ -1.57
SCARNA4-202ENST00000625402 CCDC24Q8N4L8 307 aa5.26□□□□□ -1.57
SCARNA4-202ENST00000625402 PPP1R12CQ9BZL4 782 aa5.26□□□□□ -1.57
SCARNA4-202ENST00000625402 SOX11P35716 441 aa5.25□□□□□ -1.57
SCARNA4-202ENST00000625402 SRPK2P78362 688 aaKnown RBP5.25□□□□□ -1.57
SCARNA4-202ENST00000625402 LINC01559Q495D7 138 aa5.25□□□□□ -1.57
SCARNA4-202ENST00000625402 C4orf48Q5BLP8 95 aa5.25□□□□□ -1.57
SCARNA4-202ENST00000625402 PLA2G2CQ5R387 149 aa5.25□□□□□ -1.57
SCARNA4-202ENST00000625402 NBPF14Q5TI25 921 aa5.25□□□□□ -1.57
SCARNA4-202ENST00000625402 TBC1D9Q6ZT07 1266 aa5.25□□□□□ -1.57
SCARNA4-202ENST00000625402 RETREG2Q8NC44 543 aa5.25□□□□□ -1.57
SCARNA4-202ENST00000625402 PNMA1Q8ND90 353 aa5.25□□□□□ -1.57
SCARNA4-202ENST00000625402 FAM174AQ8TBP5 190 aa5.25□□□□□ -1.57
SCARNA4-202ENST00000625402 PPEF1O14829 653 aaPredicted RBP5.24□□□□□ -1.57
SCARNA4-202ENST00000625402 RFX1P22670 979 aa5.24□□□□□ -1.57
SCARNA4-202ENST00000625402 EIF4G2P78344 907 aaKnown RBP eCLIP5.24□□□□□ -1.57
SCARNA4-202ENST00000625402 SEMA3FQ13275 785 aa5.24□□□□□ -1.57
SCARNA4-202ENST00000625402 PDXDC2PQ6P474 469 aa5.24□□□□□ -1.57
SCARNA4-202ENST00000625402 SH3RF1Q7Z6J0 888 aa5.24□□□□□ -1.57
SCARNA4-202ENST00000625402 FOXJ1Q92949 421 aa5.24□□□□□ -1.57
SCARNA4-202ENST00000625402 HCSTQ9UBK5 93 aa5.24□□□□□ -1.57
SCARNA4-202ENST00000625402 MAFBQ9Y5Q3 323 aaPredicted RBP5.24□□□□□ -1.57
SCARNA4-202ENST00000625402 RNF223E7ERA6 249 aa5.23□□□□□ -1.57
SCARNA4-202ENST00000625402 ADAM32Q8TC27 787 aa5.23□□□□□ -1.57
SCARNA4-202ENST00000625402 BAP1Q92560 729 aa5.23□□□□□ -1.57
SCARNA4-202ENST00000625402 GPKOWQ92917 476 aaPredicted RBP eCLIP5.23□□□□□ -1.57
SCARNA4-202ENST00000625402 PBXIP1Q96AQ6 731 aa5.23□□□□□ -1.57
SCARNA4-202ENST00000625402 CARD14Q9BXL6 1004 aa5.23□□□□□ -1.57
SCARNA4-202ENST00000625402 TFIP11Q9UBB9 837 aaKnown RBP5.23□□□□□ -1.57
SCARNA4-202ENST00000625402 GPSM3Q9Y4H4 160 aa5.23□□□□□ -1.57
SCARNA4-202ENST00000625402 ATP9BO43861 1147 aa5.22□□□□□ -1.57
SCARNA4-202ENST00000625402 LMOD1P29536 600 aaPredicted RBP5.22□□□□□ -1.57
SCARNA4-202ENST00000625402 PTK2Q05397 1052 aa5.22□□□□□ -1.57
SCARNA4-202ENST00000625402 ZNF511Q8NB15 262 aa5.22□□□□□ -1.57
SCARNA4-202ENST00000625402 ARMC2Q8NEN0 867 aa5.22□□□□□ -1.57
SCARNA4-202ENST00000625402 ARHGAP9Q9BRR9 750 aa5.22□□□□□ -1.57
SCARNA4-202ENST00000625402 PCDHB9Q9Y5E1 797 aa5.22□□□□□ -1.57
SCARNA4-202ENST00000625402 MAGEB6P1A0A0J9YX57 407 aa5.21□□□□□ -1.58
SCARNA4-202ENST00000625402 KCNC4Q03721 635 aa5.21□□□□□ -1.58
SCARNA4-202ENST00000625402 ERFEQ4G0M1 354 aa5.21□□□□□ -1.58
SCARNA4-202ENST00000625402 EMID1Q96A84 441 aaPredicted RBP5.21□□□□□ -1.58
SCARNA4-202ENST00000625402 C1QTNF2Q9BXJ5 285 aa5.21□□□□□ -1.58
SCARNA4-202ENST00000625402 CARNS1A5YM72 827 aa5.2□□□□□ -1.58
SCARNA4-202ENST00000625402 USP17L3A6NCW0 530 aa5.2□□□□□ -1.58
SCARNA4-202ENST00000625402 USP17L4A6NCW7 530 aa5.2□□□□□ -1.58
SCARNA4-202ENST00000625402 SH3BP2P78314 561 aa5.2□□□□□ -1.58
SCARNA4-202ENST00000625402 SKOR1P84550 965 aa5.2□□□□□ -1.58
SCARNA4-202ENST00000625402 TRIM26Q12899 539 aaPredicted RBP5.2□□□□□ -1.58
SCARNA4-202ENST00000625402 CDCA8Q53HL2 280 aa5.2□□□□□ -1.58
SCARNA4-202ENST00000625402 USP17L2Q6R6M4 530 aa5.2□□□□□ -1.58
SCARNA4-202ENST00000625402 USP17L1Q7RTZ2 530 aa5.2□□□□□ -1.58
SCARNA4-202ENST00000625402 DEPDC4Q8N2C3 294 aa5.2□□□□□ -1.58
SCARNA4-202ENST00000625402 PHTF2Q8N3S3 785 aa5.2□□□□□ -1.58
SCARNA4-202ENST00000625402 CEP126Q9P2H0 1117 aa5.2□□□□□ -1.58
SCARNA4-202ENST00000625402 USP17L5A8MUK1 530 aa5.19□□□□□ -1.58
SCARNA4-202ENST00000625402 PPP1R15AO75807 674 aaPredicted RBP5.19□□□□□ -1.58
SCARNA4-202ENST00000625402 TRIM32Q13049 653 aa5.19□□□□□ -1.58
SCARNA4-202ENST00000625402 TSGA10IPQ3SY00 556 aa5.19□□□□□ -1.58
SCARNA4-202ENST00000625402 PPP1R18Q6NYC8 613 aa5.19□□□□□ -1.58
SCARNA4-202ENST00000625402 ANKLE1Q8NAG6 615 aa5.19□□□□□ -1.58
SCARNA4-202ENST00000625402 CHIC2Q9UKJ5 165 aa5.19□□□□□ -1.58
SCARNA4-202ENST00000625402 SKIP12755 728 aa5.18□□□□□ -1.58
SCARNA4-202ENST00000625402 KANK4Q5T7N3 995 aaPredicted RBP5.18□□□□□ -1.58
SCARNA4-202ENST00000625402 ZBTB33Q86T24 672 aa5.18□□□□□ -1.58
SCARNA4-202ENST00000625402 RNF135Q8IUD6 432 aa5.18□□□□□ -1.58
SCARNA4-202ENST00000625402 NFATC2IPQ8NCF5 419 aa5.18□□□□□ -1.58
SCARNA4-202ENST00000625402 ZMIZ1Q9ULJ6 1067 aa5.18□□□□□ -1.58
SCARNA4-202ENST00000625402 NCOA4Q13772 614 aa5.17□□□□□ -1.58
SCARNA4-202ENST00000625402 TRAF7Q6Q0C0 670 aa5.17□□□□□ -1.58
SCARNA4-202ENST00000625402 BPHLQ86WA6 291 aaPredicted RBP5.17□□□□□ -1.58
SCARNA4-202ENST00000625402 PLEKHM2Q8IWE5 1019 aa5.17□□□□□ -1.58
SCARNA4-202ENST00000625402 PLPP7Q8NBV4 271 aa5.17□□□□□ -1.58
SCARNA4-202ENST00000625402 CCDC85AQ96PX6 553 aaPredicted RBP5.17□□□□□ -1.58
SCARNA4-202ENST00000625402 TRAIPQ9BWF2 469 aa5.17□□□□□ -1.58
SCARNA4-202ENST00000625402 TMEM88BA6NKF7 163 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms