RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 ACIN1Q9UKV3 1341 aaKnown RBP21.73■■□□□ 1.07
PNKP-218ENST00000625299 PAK3O75914 559 aaPredicted RBP21.72■■□□□ 1.07
PNKP-218ENST00000625299 PRR36Q9H6K5 1346 aa21.72■■□□□ 1.07
PNKP-218ENST00000625299 EIF3AQ14152 1382 aaKnown RBP21.72■■□□□ 1.07
PNKP-218ENST00000625299 ADGRB1O14514 1584 aa21.71■■□□□ 1.07
PNKP-218ENST00000625299 SPATA31A5Q5VU36 1347 aa21.71■■□□□ 1.07
PNKP-218ENST00000625299 SPATA31A7Q8IWB4 1347 aa21.71■■□□□ 1.07
PNKP-218ENST00000625299 TULP4Q9NRJ4 1543 aa21.7■■□□□ 1.07
PNKP-218ENST00000625299 R3HDM1Q15032 1099 aaKnown RBP21.7■■□□□ 1.06
PNKP-218ENST00000625299 NGDNQ8NEJ9 315 aaKnown RBP21.7■■□□□ 1.06
PNKP-218ENST00000625299 PRDM11Q9NQV5 511 aa21.7■■□□□ 1.06
PNKP-218ENST00000625299 THSD7AQ9UPZ6 1657 aa21.69■■□□□ 1.06
PNKP-218ENST00000625299 TNS1Q9HBL0 1735 aaKnown RBP21.69■■□□□ 1.06
PNKP-218ENST00000625299 CRYBG1Q9Y4K1 1723 aa21.69■■□□□ 1.06
PNKP-218ENST00000625299 KDM2AQ9Y2K7 1162 aa21.67■■□□□ 1.06
PNKP-218ENST00000625299 WASLO00401 505 aaPredicted RBP21.66■■□□□ 1.06
PNKP-218ENST00000625299 EZH2Q15910 746 aaKnown RBP21.65■■□□□ 1.06
PNKP-218ENST00000625299 STRN4Q9NRL3 753 aa21.65■■□□□ 1.06
PNKP-218ENST00000625299 CHRNA2Q15822 529 aa21.64■■□□□ 1.05
PNKP-218ENST00000625299 DISP2A7MBM2 1401 aa21.63■■□□□ 1.05
PNKP-218ENST00000625299 ITSN1Q15811 1721 aa21.63■■□□□ 1.05
PNKP-218ENST00000625299 KIAA0232Q92628 1395 aa21.63■■□□□ 1.05
PNKP-218ENST00000625299 PHRF1Q9P1Y6 1649 aaKnown RBP21.62■■□□□ 1.05
PNKP-218ENST00000625299 TRIM37O94972 964 aa21.62■■□□□ 1.05
PNKP-218ENST00000625299 SPATA31A1Q5TZJ5 1347 aa21.61■■□□□ 1.05
PNKP-218ENST00000625299 DCAF11Q8TEB1 546 aa21.61■■□□□ 1.05
PNKP-218ENST00000625299 USP35Q9P2H5 1018 aa21.61■■□□□ 1.05
PNKP-218ENST00000625299 ZC3H6P61129 1189 aaKnown RBP21.6■■□□□ 1.05
PNKP-218ENST00000625299 NUTM2GQ5VZR2 741 aa21.6■■□□□ 1.05
PNKP-218ENST00000625299 ATP7BP35670 1465 aa21.59■■□□□ 1.05
PNKP-218ENST00000625299 ARHGEF28Q8N1W1 1705 aaKnown RBP21.59■■□□□ 1.05
PNKP-218ENST00000625299 RAB3GAP2Q9H2M9 1393 aa21.59■■□□□ 1.05
PNKP-218ENST00000625299 APBA3O96018 575 aa21.58■■□□□ 1.05
PNKP-218ENST00000625299 FAM196AQ6ZSG2 479 aa21.58■■□□□ 1.05
PNKP-218ENST00000625299 NUDT16Q96DE0 195 aaKnown RBP21.57■■□□□ 1.04
PNKP-218ENST00000625299 CAMKK2Q96RR4 588 aa21.57■■□□□ 1.04
PNKP-218ENST00000625299 EVA1CP58658 441 aa21.56■■□□□ 1.04
PNKP-218ENST00000625299 PDE3BQ13370 1112 aa21.53■■□□□ 1.04
PNKP-218ENST00000625299 SSH2Q76I76 1423 aa21.53■■□□□ 1.04
PNKP-218ENST00000625299 PARD3Q8TEW0 1356 aa21.52■■□□□ 1.04
PNKP-218ENST00000625299 RREB1Q92766 1687 aa21.52■■□□□ 1.04
PNKP-218ENST00000625299 NUP188Q5SRE5 1749 aa21.52■■□□□ 1.03
PNKP-218ENST00000625299 CDK19Q9BWU1 502 aa21.51■■□□□ 1.03
PNKP-218ENST00000625299 NRKQ7Z2Y5 1582 aa21.51■■□□□ 1.03
PNKP-218ENST00000625299 TOPAZ1Q8N9V7 1692 aa21.5■■□□□ 1.03
PNKP-218ENST00000625299 ACEP12821 1306 aa21.5■■□□□ 1.03
PNKP-218ENST00000625299 LARP1Q6PKG0 1096 aaKnown RBP21.49■■□□□ 1.03
PNKP-218ENST00000625299 BARGINQ6ZT62 677 aa21.49■■□□□ 1.03
PNKP-218ENST00000625299 CAMTA1Q9Y6Y1 1673 aa21.48■■□□□ 1.03
PNKP-218ENST00000625299 NBPF8Q3BBV2 869 aa21.48■■□□□ 1.03
PNKP-218ENST00000625299 NBPF14Q5TI25 921 aa21.48■■□□□ 1.03
PNKP-218ENST00000625299 ABTB2Q8N961 1025 aa21.48■■□□□ 1.03
PNKP-218ENST00000625299 TCP11L2Q8N4U5 519 aa21.47■■□□□ 1.03
PNKP-218ENST00000625299 POLR3AO14802 1390 aaPredicted RBP21.47■■□□□ 1.03
PNKP-218ENST00000625299 STAC3Q96MF2 364 aa21.46■■□□□ 1.03
PNKP-218ENST00000625299 LMO7Q8WWI1 1683 aa21.45■■□□□ 1.02
PNKP-218ENST00000625299 CCDC61Q9Y6R9 512 aa21.45■■□□□ 1.02
PNKP-218ENST00000625299 ZBTB7CA1YPR0 619 aa21.44■■□□□ 1.02
PNKP-218ENST00000625299 PPP1R1BQ9UD71 204 aaPredicted RBP21.44■■□□□ 1.02
PNKP-218ENST00000625299 YY1P25490 414 aa21.43■■□□□ 1.02
PNKP-218ENST00000625299 CPDO75976 1380 aa21.43■■□□□ 1.02
PNKP-218ENST00000625299 PARP4Q9UKK3 1724 aaKnown RBP21.41■■□□□ 1.02
PNKP-218ENST00000625299 USP19O94966 1318 aa21.41■■□□□ 1.02
PNKP-218ENST00000625299 PLEKHG3A1L390 1219 aa21.41■■□□□ 1.02
PNKP-218ENST00000625299 NLRP13Q86W25 1043 aa21.4■■□□□ 1.02
PNKP-218ENST00000625299 COL5A2P05997 1499 aaPredicted RBP21.39■■□□□ 1.02
PNKP-218ENST00000625299 SRPK2P78362 688 aaKnown RBP21.39■■□□□ 1.01
PNKP-218ENST00000625299 SPON1Q9HCB6 807 aa21.39■■□□□ 1.01
PNKP-218ENST00000625299 THRAP3Q9Y2W1 955 aaKnown RBP21.39■■□□□ 1.01
PNKP-218ENST00000625299 PPIP5K1Q6PFW1 1433 aa21.38■■□□□ 1.01
PNKP-218ENST00000625299 GCP02774 474 aa21.38■■□□□ 1.01
PNKP-218ENST00000625299 KIAA1210Q9ULL0 1709 aa21.37■■□□□ 1.01
PNKP-218ENST00000625299 KCNQ2O43526 872 aa21.36■■□□□ 1.01
PNKP-218ENST00000625299 OVOS2A0A0G2JMS6 1433 aa21.36■■□□□ 1.01
PNKP-218ENST00000625299 OVOS2A0A0J9YW53 1432 aa21.36■■□□□ 1.01
PNKP-218ENST00000625299 CRB1P82279 1406 aa21.36■■□□□ 1.01
PNKP-218ENST00000625299 OVOS2Q6IE36 1432 aa21.36■■□□□ 1.01
PNKP-218ENST00000625299 DCAF8L1A6NGE4 600 aa21.35■■□□□ 1.01
PNKP-218ENST00000625299 CABP2Q9NPB3 220 aa21.35■■□□□ 1.01
PNKP-218ENST00000625299 LRRC37A3O60309 1634 aa21.35■■□□□ 1.01
PNKP-218ENST00000625299 PEAK1Q9H792 1746 aa21.34■■□□□ 1.01
PNKP-218ENST00000625299 NBPF1Q3BBV0 1214 aa21.33■■□□□ 1.01
PNKP-218ENST00000625299 SBF2Q86WG5 1849 aa21.33■■□□□ 1.01
PNKP-218ENST00000625299 C11orf95C9JLR9 678 aaPredicted RBP21.32■■□□□ 1
PNKP-218ENST00000625299 CENPJQ9HC77 1338 aaPredicted RBP21.31■■□□□ 1
PNKP-218ENST00000625299 RGPD3A6NKT7 1758 aaPredicted RBP21.31■■□□□ 1
PNKP-218ENST00000625299 RGPD4Q7Z3J3 1758 aa21.31■■□□□ 1
PNKP-218ENST00000625299 NLRP6P59044 892 aa21.31■■□□□ 1
PNKP-218ENST00000625299 DDB1Q16531 1140 aa21.31■■□□□ 1
PNKP-218ENST00000625299 TOM1L2Q6ZVM7 507 aa21.31■■□□□ 1
PNKP-218ENST00000625299 NINLQ9Y2I6 1382 aa21.31■■□□□ 1
PNKP-218ENST00000625299 QRICH2Q9H0J4 1663 aa21.31■■□□□ 1
PNKP-218ENST00000625299 ANO8Q9HCE9 1232 aaPredicted RBP21.29■■□□□ 1
PNKP-218ENST00000625299 WNK3Q9BYP7 1800 aa21.29■■□□□ 1
PNKP-218ENST00000625299 SLIT3O75094 1523 aa21.29■■□□□ 1
PNKP-218ENST00000625299 USP6P35125 1406 aa21.29■■□□□ 1
PNKP-218ENST00000625299 AATKQ6ZMQ8 1374 aa21.28■■□□□ 1
PNKP-218ENST00000625299 PTF1AQ7RTS3 328 aa21.28■■□□□ 1
PNKP-218ENST00000625299 CABP1Q9NZU7 370 aa21.28■■□□□ 1
PNKP-218ENST00000625299 BRD4O60885 1362 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms