RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 GJD4Q96KN9 370 aaPredicted RBP6.84□□□□□ -1.31
CDKL5-208ENST00000624953 DGAT1O75907 488 aa6.83□□□□□ -1.32
CDKL5-208ENST00000624953 SKOR1P84550 965 aa6.83□□□□□ -1.32
CDKL5-208ENST00000624953 HELBQ8NG08 1087 aaPredicted RBP6.83□□□□□ -1.32
CDKL5-208ENST00000624953 TRIM34Q9BYJ4 488 aa6.83□□□□□ -1.32
CDKL5-208ENST00000624953 PKD2L1Q9P0L9 805 aa6.83□□□□□ -1.32
CDKL5-208ENST00000624953 NUTM2BA6NNL0 878 aaPredicted RBP6.82□□□□□ -1.32
CDKL5-208ENST00000624953 NUTM2EB1AL46 878 aaPredicted RBP6.82□□□□□ -1.32
CDKL5-208ENST00000624953 USP17L8P0C7I0 530 aa6.82□□□□□ -1.32
CDKL5-208ENST00000624953 TRIM32Q13049 653 aa6.82□□□□□ -1.32
CDKL5-208ENST00000624953 NUTM2DQ5VT03 806 aaPredicted RBP6.82□□□□□ -1.32
CDKL5-208ENST00000624953 NUTM2AQ8IVF1 878 aaPredicted RBP6.82□□□□□ -1.32
CDKL5-208ENST00000624953 UNC93B1Q9H1C4 597 aa6.82□□□□□ -1.32
CDKL5-208ENST00000624953 HMX1Q9NP08 348 aaPredicted RBP6.82□□□□□ -1.32
CDKL5-208ENST00000624953 MAP10Q9P2G4 905 aa6.82□□□□□ -1.32
CDKL5-208ENST00000624953 DACH1Q9UI36 760 aa6.82□□□□□ -1.32
CDKL5-208ENST00000624953 WNT7BP56706 349 aa6.81□□□□□ -1.32
CDKL5-208ENST00000624953 FOXC1Q12948 553 aa6.81□□□□□ -1.32
CDKL5-208ENST00000624953 LRRN4Q8WUT4 740 aa6.81□□□□□ -1.32
CDKL5-208ENST00000624953 MTMR14Q8NCE2 650 aa6.8□□□□□ -1.32
CDKL5-208ENST00000624953 RB1CC1Q8TDY2 1594 aa6.8□□□□□ -1.32
CDKL5-208ENST00000624953 WNT7AO00755 349 aa6.79□□□□□ -1.32
CDKL5-208ENST00000624953 SH3BP2P78314 561 aa6.79□□□□□ -1.32
CDKL5-208ENST00000624953 SH3BP5LQ7L8J4 393 aa6.79□□□□□ -1.32
CDKL5-208ENST00000624953 SH3RF1Q7Z6J0 888 aa6.79□□□□□ -1.32
CDKL5-208ENST00000624953 AAASQ9NRG9 546 aa6.79□□□□□ -1.32
CDKL5-208ENST00000624953 ZC3H4Q9UPT8 1303 aaKnown RBP6.78□□□□□ -1.32
CDKL5-208ENST00000624953 SIAH2O43255 324 aa6.78□□□□□ -1.32
CDKL5-208ENST00000624953 MPNDQ8N594 471 aa6.78□□□□□ -1.32
CDKL5-208ENST00000624953 ZNF511Q8NB15 262 aa6.78□□□□□ -1.32
CDKL5-208ENST00000624953 GPKOWQ92917 476 aaPredicted RBP eCLIP6.78□□□□□ -1.32
CDKL5-208ENST00000624953 C1QTNF2Q9BXJ5 285 aa6.78□□□□□ -1.32
CDKL5-208ENST00000624953 AP1G2O75843 785 aa6.77□□□□□ -1.33
CDKL5-208ENST00000624953 CD2BP2O95400 341 aaKnown RBP6.77□□□□□ -1.33
CDKL5-208ENST00000624953 EPS8L1Q8TE68 723 aa6.77□□□□□ -1.33
CDKL5-208ENST00000624953 OCSTAMPQ9BR26 566 aa6.77□□□□□ -1.33
CDKL5-208ENST00000624953 TOR4AQ9NXH8 423 aa6.77□□□□□ -1.33
CDKL5-208ENST00000624953 C4orf48Q5BLP8 95 aa6.76□□□□□ -1.33
CDKL5-208ENST00000624953 SNRKQ9NRH2 765 aa6.76□□□□□ -1.33
CDKL5-208ENST00000624953 MCM6Q14566 821 aa6.75□□□□□ -1.33
CDKL5-208ENST00000624953 CCDC24Q8N4L8 307 aa6.75□□□□□ -1.33
CDKL5-208ENST00000624953 BAP1Q92560 729 aa6.75□□□□□ -1.33
CDKL5-208ENST00000624953 FKBPLQ9UIM3 349 aa6.75□□□□□ -1.33
CDKL5-208ENST00000624953 ZBTB24O43167 697 aaPredicted RBP6.74□□□□□ -1.33
CDKL5-208ENST00000624953 NR6A1Q15406 480 aa6.74□□□□□ -1.33
CDKL5-208ENST00000624953 LCE2AQ5TA79 106 aaPredicted RBP6.74□□□□□ -1.33
CDKL5-208ENST00000624953 RC3H1Q5TC82 1133 aaKnown RBP6.74□□□□□ -1.33
CDKL5-208ENST00000624953 PDXDC2PQ6P474 469 aa6.74□□□□□ -1.33
CDKL5-208ENST00000624953 TRMT44Q8IYL2 757 aaKnown RBP6.74□□□□□ -1.33
CDKL5-208ENST00000624953 ARMC2Q8NEN0 867 aa6.74□□□□□ -1.33
CDKL5-208ENST00000624953 GPSM3Q9Y4H4 160 aa6.74□□□□□ -1.33
CDKL5-208ENST00000624953 GMPR2Q9P2T1 348 aaKnown RBP6.73□□□□□ -1.33
CDKL5-208ENST00000624953 CTHP32929 405 aa6.72□□□□□ -1.33
CDKL5-208ENST00000624953 TSC1Q92574 1164 aa6.72□□□□□ -1.33
CDKL5-208ENST00000624953 MRGPRX2Q96LB1 330 aa6.72□□□□□ -1.33
CDKL5-208ENST00000624953 CDK15Q96Q40 435 aa6.72□□□□□ -1.33
CDKL5-208ENST00000624953 BICRAQ9NZM4 1560 aa6.72□□□□□ -1.33
CDKL5-208ENST00000624953 AVPP01185 164 aa6.71□□□□□ -1.34
CDKL5-208ENST00000624953 VARSP26640 1264 aaKnown RBP6.71□□□□□ -1.34
CDKL5-208ENST00000624953 NBPF14Q5TI25 921 aa6.71□□□□□ -1.34
CDKL5-208ENST00000624953 TREML4Q6UXN2 200 aa6.71□□□□□ -1.34
CDKL5-208ENST00000624953 FOXJ1Q92949 421 aa6.71□□□□□ -1.34
CDKL5-208ENST00000624953 IRF5Q13568 498 aa6.7□□□□□ -1.34
CDKL5-208ENST00000624953 LINC01559Q495D7 138 aa6.7□□□□□ -1.34
CDKL5-208ENST00000624953 MAP4K5Q9Y4K4 846 aa6.7□□□□□ -1.34
CDKL5-208ENST00000624953 NACADO15069 1562 aa6.69□□□□□ -1.34
CDKL5-208ENST00000624953 SMPD1P17405 629 aa6.69□□□□□ -1.34
CDKL5-208ENST00000624953 BPHLQ86WA6 291 aaPredicted RBP6.69□□□□□ -1.34
CDKL5-208ENST00000624953 CYP4X1Q8N118 509 aa6.69□□□□□ -1.34
CDKL5-208ENST00000624953 CRIPAKQ8N1N5 446 aa6.68□□□□□ -1.34
CDKL5-208ENST00000624953 SNIP1Q8TAD8 396 aaKnown RBP6.68□□□□□ -1.34
CDKL5-208ENST00000624953 AXIN1O15169 862 aa6.67□□□□□ -1.34
CDKL5-208ENST00000624953 FLIIQ13045 1269 aa6.67□□□□□ -1.34
CDKL5-208ENST00000624953 ERFEQ4G0M1 354 aa6.67□□□□□ -1.34
CDKL5-208ENST00000624953 NDUFB9Q9Y6M9 179 aa6.67□□□□□ -1.34
CDKL5-208ENST00000624953 C11orf95C9JLR9 678 aaPredicted RBP6.66□□□□□ -1.34
CDKL5-208ENST00000624953 GRM5P41594 1212 aa6.66□□□□□ -1.34
CDKL5-208ENST00000624953 SMCPP49901 116 aaPredicted RBP6.66□□□□□ -1.34
CDKL5-208ENST00000624953 LCE2CQ5TA81 110 aa6.66□□□□□ -1.34
CDKL5-208ENST00000624953 EHBP1Q8NDI1 1231 aa6.66□□□□□ -1.34
CDKL5-208ENST00000624953 KLF16Q9BXK1 252 aaPredicted RBP6.66□□□□□ -1.34
CDKL5-208ENST00000624953 TBC1D2BQ9UPU7 963 aa6.66□□□□□ -1.34
CDKL5-208ENST00000624953 J3QL48 77 aa6.65□□□□□ -1.34
CDKL5-208ENST00000624953 APBB1O00213 710 aa6.65□□□□□ -1.34
CDKL5-208ENST00000624953 COG6Q9Y2V7 657 aa6.65□□□□□ -1.34
CDKL5-208ENST00000624953 TTC24A2A3L6 582 aaPredicted RBP6.64□□□□□ -1.35
CDKL5-208ENST00000624953 ESPNB1AK53 854 aa6.64□□□□□ -1.35
CDKL5-208ENST00000624953 FBXO45P0C2W1 286 aa6.64□□□□□ -1.35
CDKL5-208ENST00000624953 NFX1Q12986 1120 aaKnown RBP6.64□□□□□ -1.35
CDKL5-208ENST00000624953 FAM174AQ8TBP5 190 aa6.64□□□□□ -1.35
CDKL5-208ENST00000624953 TLL2Q9Y6L7 1015 aa6.64□□□□□ -1.35
CDKL5-208ENST00000624953 ZBBXA8MT70 800 aa6.63□□□□□ -1.35
CDKL5-208ENST00000624953 WFS1O76024 890 aa6.63□□□□□ -1.35
CDKL5-208ENST00000624953 ADH1CP00326 375 aa6.63□□□□□ -1.35
CDKL5-208ENST00000624953 PTK2Q05397 1052 aa6.63□□□□□ -1.35
CDKL5-208ENST00000624953 NR1H3Q13133 447 aa6.63□□□□□ -1.35
CDKL5-208ENST00000624953 FNBP4Q8N3X1 1017 aaPredicted RBP6.63□□□□□ -1.35
CDKL5-208ENST00000624953 PNMA1Q8ND90 353 aa6.63□□□□□ -1.35
CDKL5-208ENST00000624953 ADAM32Q8TC27 787 aa6.63□□□□□ -1.35
CDKL5-208ENST00000624953 ARHGAP9Q9BRR9 750 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms