RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-218ENST00000624138 RGPD4Q7Z3J3 1758 aa11.03□□□□□ -0.64
LINC00963-218ENST00000624138 DCAF8L1A6NGE4 600 aa11.02□□□□□ -0.65
LINC00963-218ENST00000624138 APBA3O96018 575 aa11.02□□□□□ -0.65
LINC00963-218ENST00000624138 CASZ1Q86V15 1759 aa11.02□□□□□ -0.65
LINC00963-218ENST00000624138 KCNQ2O43526 872 aa11.01□□□□□ -0.65
LINC00963-218ENST00000624138 NBPF8Q3BBV2 869 aa11.01□□□□□ -0.65
LINC00963-218ENST00000624138 NBPF14Q5TI25 921 aa11.01□□□□□ -0.65
LINC00963-218ENST00000624138 SPON1Q9HCB6 807 aa11.01□□□□□ -0.65
LINC00963-218ENST00000624138 ANKRD30BQ9BXX2 1392 aa11.01□□□□□ -0.65
LINC00963-218ENST00000624138 PIK3C2GO75747 1445 aa11.01□□□□□ -0.65
LINC00963-218ENST00000624138 SPATA31A1Q5TZJ5 1347 aa11□□□□□ -0.65
LINC00963-218ENST00000624138 SPATA31E1Q6ZUB1 1445 aa11□□□□□ -0.65
LINC00963-218ENST00000624138 ANKARQ7Z5J8 1434 aa11□□□□□ -0.65
LINC00963-218ENST00000624138 PHRF1Q9P1Y6 1649 aaKnown RBP10.99□□□□□ -0.65
LINC00963-218ENST00000624138 IFFO2Q5TF58 517 aa10.99□□□□□ -0.65
LINC00963-218ENST00000624138 PPP1R1BQ9UD71 204 aaPredicted RBP10.99□□□□□ -0.65
LINC00963-218ENST00000624138 PARP4Q9UKK3 1724 aaKnown RBP10.98□□□□□ -0.65
LINC00963-218ENST00000624138 PMFBP1Q8TBY8 1022 aa10.98□□□□□ -0.65
LINC00963-218ENST00000624138 ZNF784Q8NCA9 323 aaPredicted RBP10.97□□□□□ -0.65
LINC00963-218ENST00000624138 SLC4A1APQ9BWU0 796 aaKnown RBP10.97□□□□□ -0.65
LINC00963-218ENST00000624138 ITSN1Q15811 1721 aa10.97□□□□□ -0.65
LINC00963-218ENST00000624138 PEAK1Q9H792 1746 aa10.96□□□□□ -0.65
LINC00963-218ENST00000624138 MYOM1P52179 1685 aa10.96□□□□□ -0.65
LINC00963-218ENST00000624138 NRKQ7Z2Y5 1582 aa10.96□□□□□ -0.65
LINC00963-218ENST00000624138 DLC1Q96QB1 1528 aa10.96□□□□□ -0.65
LINC00963-218ENST00000624138 RGL3Q3MIN7 710 aa10.96□□□□□ -0.65
LINC00963-218ENST00000624138 C14orf93Q9H972 538 aaKnown RBP10.96□□□□□ -0.65
LINC00963-218ENST00000624138 UTRNP46939 3433 aa10.96□□□□□ -0.66
LINC00963-218ENST00000624138 GPRASP1Q5JY77 1395 aa10.95□□□□□ -0.66
LINC00963-218ENST00000624138 DHX57Q6P158 1386 aaKnown RBP10.95□□□□□ -0.66
LINC00963-218ENST00000624138 ACIN1Q9UKV3 1341 aaKnown RBP10.95□□□□□ -0.66
LINC00963-218ENST00000624138 BARGINQ6ZT62 677 aa10.95□□□□□ -0.66
LINC00963-218ENST00000624138 PRDM11Q9NQV5 511 aa10.95□□□□□ -0.66
LINC00963-218ENST00000624138 KIAA0232Q92628 1395 aa10.93□□□□□ -0.66
LINC00963-218ENST00000624138 LMO7Q8WWI1 1683 aa10.93□□□□□ -0.66
LINC00963-218ENST00000624138 SENP3-EIF4A1A0A087X0R7 540 aa10.93□□□□□ -0.66
LINC00963-218ENST00000624138 C1QTNF8P60827 252 aa10.93□□□□□ -0.66
LINC00963-218ENST00000624138 PDE3BQ13370 1112 aa10.93□□□□□ -0.66
LINC00963-218ENST00000624138 PRAM1Q96QH2 718 aa10.93□□□□□ -0.66
LINC00963-218ENST00000624138 PLSCR1O15162 318 aa10.92□□□□□ -0.66
LINC00963-218ENST00000624138 SAFB2Q14151 953 aaKnown RBP eCLIP10.92□□□□□ -0.66
LINC00963-218ENST00000624138 TULP4Q9NRJ4 1543 aa10.92□□□□□ -0.66
LINC00963-218ENST00000624138 AKAP12Q02952 1782 aa10.92□□□□□ -0.66
LINC00963-218ENST00000624138 SSH2Q76I76 1423 aa10.92□□□□□ -0.66
LINC00963-218ENST00000624138 WNK3Q9BYP7 1800 aa10.91□□□□□ -0.66
LINC00963-218ENST00000624138 PRR36Q9H6K5 1346 aa10.91□□□□□ -0.66
LINC00963-218ENST00000624138 CHRNA2Q15822 529 aa10.91□□□□□ -0.66
LINC00963-218ENST00000624138 CFAP70Q5T0N1 1121 aa10.91□□□□□ -0.66
LINC00963-218ENST00000624138 STRN4Q9NRL3 753 aa10.91□□□□□ -0.66
LINC00963-218ENST00000624138 C11orf95C9JLR9 678 aaPredicted RBP10.9□□□□□ -0.66
LINC00963-218ENST00000624138 EIF3AQ14152 1382 aaKnown RBP10.9□□□□□ -0.67
LINC00963-218ENST00000624138 PAK3O75914 559 aaPredicted RBP10.89□□□□□ -0.67
LINC00963-218ENST00000624138 PTGER2P43116 358 aa10.89□□□□□ -0.67
LINC00963-218ENST00000624138 POGKQ9P215 609 aa10.89□□□□□ -0.67
LINC00963-218ENST00000624138 USP35Q9P2H5 1018 aa10.89□□□□□ -0.67
LINC00963-218ENST00000624138 THRAP3Q9Y2W1 955 aaKnown RBP10.89□□□□□ -0.67
LINC00963-218ENST00000624138 ATP7BP35670 1465 aa10.88□□□□□ -0.67
LINC00963-218ENST00000624138 ADGRB1O14514 1584 aa10.88□□□□□ -0.67
LINC00963-218ENST00000624138 EVA1CP58658 441 aa10.88□□□□□ -0.67
LINC00963-218ENST00000624138 ZC3H6P61129 1189 aaKnown RBP10.88□□□□□ -0.67
LINC00963-218ENST00000624138 TCP11L2Q8N4U5 519 aa10.88□□□□□ -0.67
LINC00963-218ENST00000624138 NGDNQ8NEJ9 315 aaKnown RBP10.88□□□□□ -0.67
LINC00963-218ENST00000624138 PDGFDQ9GZP0 370 aaPredicted RBP10.88□□□□□ -0.67
LINC00963-218ENST00000624138 ANO8Q9HCE9 1232 aaPredicted RBP10.88□□□□□ -0.67
LINC00963-218ENST00000624138 LRRC37A3O60309 1634 aa10.87□□□□□ -0.67
LINC00963-218ENST00000624138 WASLO00401 505 aaPredicted RBP10.87□□□□□ -0.67
LINC00963-218ENST00000624138 LARP1Q6PKG0 1096 aaKnown RBP10.87□□□□□ -0.67
LINC00963-218ENST00000624138 SYT17Q9BSW7 474 aa10.87□□□□□ -0.67
LINC00963-218ENST00000624138 TOPAZ1Q8N9V7 1692 aa10.87□□□□□ -0.67
LINC00963-218ENST00000624138 KAT6BQ8WYB5 2073 aa10.86□□□□□ -0.67
LINC00963-218ENST00000624138 OVOS2A0A0G2JMS6 1433 aa10.86□□□□□ -0.67
LINC00963-218ENST00000624138 OVOS2A0A0J9YW53 1432 aa10.86□□□□□ -0.67
LINC00963-218ENST00000624138 OVOS2Q6IE36 1432 aa10.86□□□□□ -0.67
LINC00963-218ENST00000624138 RGPD5Q99666 1765 aa10.86□□□□□ -0.67
LINC00963-218ENST00000624138 PROM2Q8N271 834 aa10.86□□□□□ -0.67
LINC00963-218ENST00000624138 HIRIP3Q9BW71 556 aaPredicted RBP10.86□□□□□ -0.67
LINC00963-218ENST00000624138 ARHGEF28Q8N1W1 1705 aaKnown RBP10.86□□□□□ -0.67
LINC00963-218ENST00000624138 COL24A1Q17RW2 1714 aa10.85□□□□□ -0.67
LINC00963-218ENST00000624138 ZBTB7AO95365 584 aa10.85□□□□□ -0.67
LINC00963-218ENST00000624138 FHDC1Q9C0D6 1143 aaPredicted RBP10.85□□□□□ -0.67
LINC00963-218ENST00000624138 CPDO75976 1380 aa10.85□□□□□ -0.67
LINC00963-218ENST00000624138 COL18A1P39060 1754 aa10.85□□□□□ -0.67
LINC00963-218ENST00000624138 MINK1Q8N4C8 1332 aaPredicted RBP10.84□□□□□ -0.67
LINC00963-218ENST00000624138 PPARGC1BQ86YN6 1023 aaKnown RBP10.84□□□□□ -0.67
LINC00963-218ENST00000624138 MPHOSPH9Q99550 1183 aa10.84□□□□□ -0.67
LINC00963-218ENST00000624138 SGIP1Q9BQI5 828 aa10.84□□□□□ -0.67
LINC00963-218ENST00000624138 BCL11BQ9C0K0 894 aaPredicted RBP10.84□□□□□ -0.67
LINC00963-218ENST00000624138 ATF5Q9Y2D1 282 aaPredicted RBP10.84□□□□□ -0.67
LINC00963-218ENST00000624138 COL5A2P05997 1499 aaPredicted RBP10.83□□□□□ -0.68
LINC00963-218ENST00000624138 TRAK1Q9UPV9 953 aa10.83□□□□□ -0.68
LINC00963-218ENST00000624138 QSER1Q2KHR3 1735 aa10.83□□□□□ -0.68
LINC00963-218ENST00000624138 BCL9O00512 1426 aa10.83□□□□□ -0.68
LINC00963-218ENST00000624138 CEP350Q5VT06 3117 aa10.82□□□□□ -0.68
LINC00963-218ENST00000624138 POLR3AO14802 1390 aaPredicted RBP10.82□□□□□ -0.68
LINC00963-218ENST00000624138 NUTM2GQ5VZR2 741 aa10.82□□□□□ -0.68
LINC00963-218ENST00000624138 PTF1AQ7RTS3 328 aa10.82□□□□□ -0.68
LINC00963-218ENST00000624138 NUDT16Q96DE0 195 aaKnown RBP10.82□□□□□ -0.68
LINC00963-218ENST00000624138 CRB1P82279 1406 aa10.82□□□□□ -0.68
LINC00963-218ENST00000624138 USP19O94966 1318 aa10.82□□□□□ -0.68
LINC00963-218ENST00000624138 SHANK3Q9BYB0 1731 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms