RNA–Protein interactions for RNA: ENST00000623650.3

SNHG5-217, Transcript of small nucleolar RNA host gene 5, human

TSL 5

Gene SNHG5, Length 886 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG5-217	ENST00000623650	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.75	□□□□□ -0.53
SNHG5-217	ENST00000623650	CLSPN	Q9HAW4	1339 aa		11.75	□□□□□ -0.53
SNHG5-217	ENST00000623650	CNTLN	Q9NXG0	1405 aa		11.75	□□□□□ -0.53
SNHG5-217	ENST00000623650	FBXW7	Q969H0	707 aa		11.74	□□□□□ -0.53
SNHG5-217	ENST00000623650	PRDM15	P57071	1507 aa	Predicted RBP	11.74	□□□□□ -0.53
SNHG5-217	ENST00000623650	RNF17	Q9BXT8	1623 aa	Known RBP	11.74	□□□□□ -0.53
SNHG5-217	ENST00000623650	DOK7	Q18PE1	504 aa		11.73	□□□□□ -0.53
SNHG5-217	ENST00000623650	CDAN1	Q8IWY9	1227 aa		11.73	□□□□□ -0.53
SNHG5-217	ENST00000623650	ZC3H13	Q5T200	1668 aa	Known RBP	11.72	□□□□□ -0.53
SNHG5-217	ENST00000623650	ZEB1	P37275	1124 aa	Predicted RBP	11.72	□□□□□ -0.53
SNHG5-217	ENST00000623650	BCORL1	Q5H9F3	1711 aa		11.72	□□□□□ -0.53
SNHG5-217	ENST00000623650	DEPDC5	O75140	1603 aa		11.71	□□□□□ -0.53
SNHG5-217	ENST00000623650	IQGAP3	Q86VI3	1631 aa		11.71	□□□□□ -0.53
SNHG5-217	ENST00000623650	DHX57	Q6P158	1386 aa	Known RBP	11.71	□□□□□ -0.53
SNHG5-217	ENST00000623650	TSR1	Q2NL82	804 aa	Known RBP	11.71	□□□□□ -0.53
SNHG5-217	ENST00000623650	C14orf37	Q86TY3	774 aa		11.71	□□□□□ -0.53
SNHG5-217	ENST00000623650	PARP9	Q8IXQ6	854 aa		11.71	□□□□□ -0.53
SNHG5-217	ENST00000623650	FOSB	P53539	338 aa		11.7	□□□□□ -0.54
SNHG5-217	ENST00000623650	FAM117A	Q9C073	453 aa		11.69	□□□□□ -0.54
SNHG5-217	ENST00000623650	TET3	O43151	1660 aa		11.68	□□□□□ -0.54
SNHG5-217	ENST00000623650	RIMBP2	O15034	1052 aa		11.68	□□□□□ -0.54
SNHG5-217	ENST00000623650	HOXB3	P14651	431 aa	Predicted RBP	11.68	□□□□□ -0.54
SNHG5-217	ENST00000623650	ABCC3	O15438	1527 aa		11.68	□□□□□ -0.54
SNHG5-217	ENST00000623650	LMTK2	Q8IWU2	1503 aa		11.68	□□□□□ -0.54
SNHG5-217	ENST00000623650	PZP	P20742	1482 aa		11.68	□□□□□ -0.54
SNHG5-217	ENST00000623650	RPRD2	Q5VT52	1461 aa	Known RBP	11.68	□□□□□ -0.54
SNHG5-217	ENST00000623650	CCDC144A	A2RUR9	1427 aa		11.68	□□□□□ -0.54
SNHG5-217	ENST00000623650	EFCAB6	Q5THR3	1501 aa		11.67	□□□□□ -0.54
SNHG5-217	ENST00000623650	NUDT7	P0C024	238 aa		11.67	□□□□□ -0.54
SNHG5-217	ENST00000623650	TTLL12	Q14166	644 aa	Predicted RBP	11.67	□□□□□ -0.54
SNHG5-217	ENST00000623650	ARSI	Q5FYB1	569 aa		11.67	□□□□□ -0.54
SNHG5-217	ENST00000623650	DDRGK1	Q96HY6	314 aa		11.67	□□□□□ -0.54
SNHG5-217	ENST00000623650	ZSWIM6	Q9HCJ5	1215 aa		11.67	□□□□□ -0.54
SNHG5-217	ENST00000623650	TONSL	Q96HA7	1378 aa		11.67	□□□□□ -0.54
SNHG5-217	ENST00000623650	ZNF454	Q8N9F8	522 aa		11.66	□□□□□ -0.54
SNHG5-217	ENST00000623650	ZDHHC16	Q969W1	377 aa		11.66	□□□□□ -0.54
SNHG5-217	ENST00000623650	NEUROD1	Q13562	356 aa		11.65	□□□□□ -0.54
SNHG5-217	ENST00000623650	CERK	Q8TCT0	537 aa		11.65	□□□□□ -0.54
SNHG5-217	ENST00000623650	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.65	□□□□□ -0.54	2e-8	■■■■□ 26.4
SNHG5-217	ENST00000623650	CAMSAP1	Q5T5Y3	1602 aa		11.64	□□□□□ -0.55
SNHG5-217	ENST00000623650	CEP152	O94986	1710 aa		11.64	□□□□□ -0.55
SNHG5-217	ENST00000623650	VWDE	Q8N2E2	1590 aa		11.64	□□□□□ -0.55
SNHG5-217	ENST00000623650	C6orf132	Q5T0Z8	1188 aa		11.64	□□□□□ -0.55
SNHG5-217	ENST00000623650	GPR153	Q6NV75	609 aa		11.64	□□□□□ -0.55
SNHG5-217	ENST00000623650	MARVELD3	Q96A59	401 aa		11.64	□□□□□ -0.55
SNHG5-217	ENST00000623650	MROH1	Q8NDA8	1641 aa		11.64	□□□□□ -0.55
SNHG5-217	ENST00000623650	ARHGAP31	Q2M1Z3	1444 aa		11.63	□□□□□ -0.55
SNHG5-217	ENST00000623650	CLTC	Q00610	1675 aa	Known RBP	11.63	□□□□□ -0.55
SNHG5-217	ENST00000623650	PLEKHG3	A1L390	1219 aa		11.63	□□□□□ -0.55
SNHG5-217	ENST00000623650	FER1L4	A9Z1Z3	1794 aa		11.63	□□□□□ -0.55
SNHG5-217	ENST00000623650	ADAMTSL3	P82987	1691 aa		11.62	□□□□□ -0.55
SNHG5-217	ENST00000623650	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.62	□□□□□ -0.55
SNHG5-217	ENST00000623650	ZNF710	Q8N1W2	664 aa		11.62	□□□□□ -0.55
SNHG5-217	ENST00000623650	ZMYM3	Q14202	1370 aa		11.62	□□□□□ -0.55
SNHG5-217	ENST00000623650	SLC52A1	Q9NWF4	448 aa		11.61	□□□□□ -0.55
SNHG5-217	ENST00000623650	MROH2A	A6NES4	1674 aa		11.61	□□□□□ -0.55
SNHG5-217	ENST00000623650	NPAT	Q14207	1427 aa		11.6	□□□□□ -0.55
SNHG5-217	ENST00000623650	TNR	Q92752	1358 aa		11.6	□□□□□ -0.55
SNHG5-217	ENST00000623650	EMP3	P54852	163 aa		11.6	□□□□□ -0.55
SNHG5-217	ENST00000623650	ZNF326	Q5BKZ1	582 aa	Known RBP	11.6	□□□□□ -0.55
SNHG5-217	ENST00000623650	ADAM33	Q9BZ11	813 aa		11.6	□□□□□ -0.55
SNHG5-217	ENST00000623650	TRPM2	O94759	1503 aa		11.6	□□□□□ -0.55
SNHG5-217	ENST00000623650	ANKRD30B	Q9BXX2	1392 aa		11.59	□□□□□ -0.55
SNHG5-217	ENST00000623650	CLCN1	P35523	988 aa		11.59	□□□□□ -0.55
SNHG5-217	ENST00000623650	REPIN1	Q9BWE0	567 aa	Known RBP	11.59	□□□□□ -0.55
SNHG5-217	ENST00000623650	ERVK-7	P63135	1459 aa		11.58	□□□□□ -0.56
SNHG5-217	ENST00000623650	MADD	Q8WXG6	1647 aa		11.58	□□□□□ -0.56
SNHG5-217	ENST00000623650	OAT	P04181	439 aa		11.58	□□□□□ -0.56
SNHG5-217	ENST00000623650	HDGF	P51858	240 aa	Known RBP	11.58	□□□□□ -0.56
SNHG5-217	ENST00000623650	PADI6	Q6TGC4	694 aa		11.58	□□□□□ -0.56
SNHG5-217	ENST00000623650	PHOX2B	Q99453	314 aa		11.58	□□□□□ -0.56
SNHG5-217	ENST00000623650	TMUB1	Q9BVT8	246 aa		11.58	□□□□□ -0.56
SNHG5-217	ENST00000623650	RBM27	Q9P2N5	1060 aa	Known RBP	11.58	□□□□□ -0.56
SNHG5-217	ENST00000623650		E9PCH4	1651 aa		11.58	□□□□□ -0.56
SNHG5-217	ENST00000623650	SPHKAP	Q2M3C7	1700 aa		11.57	□□□□□ -0.56
SNHG5-217	ENST00000623650	PTPRM	P28827	1452 aa		11.57	□□□□□ -0.56
SNHG5-217	ENST00000623650	RIMS1	Q86UR5	1692 aa	Known RBP	11.57	□□□□□ -0.56
SNHG5-217	ENST00000623650	PTPRT	O14522	1441 aa		11.56	□□□□□ -0.56
SNHG5-217	ENST00000623650	MS4A1	P11836	297 aa		11.56	□□□□□ -0.56
SNHG5-217	ENST00000623650	HOXB1	P14653	301 aa	Predicted RBP	11.56	□□□□□ -0.56
SNHG5-217	ENST00000623650	MDM2	Q00987	491 aa	Predicted RBP	11.56	□□□□□ -0.56
SNHG5-217	ENST00000623650	GPCPD1	Q9NPB8	672 aa		11.56	□□□□□ -0.56
SNHG5-217	ENST00000623650	LHX6	Q9UPM6	363 aa		11.56	□□□□□ -0.56
SNHG5-217	ENST00000623650	SIGLEC1	Q9BZZ2	1709 aa		11.55	□□□□□ -0.56
SNHG5-217	ENST00000623650	PPP1R15A	O75807	674 aa	Predicted RBP	11.55	□□□□□ -0.56
SNHG5-217	ENST00000623650	FAM161A	Q3B820	660 aa		11.55	□□□□□ -0.56
SNHG5-217	ENST00000623650	METTL3	Q86U44	580 aa	Known RBP	11.55	□□□□□ -0.56
SNHG5-217	ENST00000623650	TTC13	Q8NBP0	860 aa		11.55	□□□□□ -0.56
SNHG5-217	ENST00000623650	NLRP1	Q9C000	1473 aa		11.55	□□□□□ -0.56
SNHG5-217	ENST00000623650	NOS1	P29475	1434 aa		11.54	□□□□□ -0.56
SNHG5-217	ENST00000623650	PSD	A5PKW4	1024 aa	Predicted RBP	11.54	□□□□□ -0.56
SNHG5-217	ENST00000623650	RGL3	Q3MIN7	710 aa		11.54	□□□□□ -0.56
SNHG5-217	ENST00000623650	PPP4R3B	Q5MIZ7	849 aa		11.54	□□□□□ -0.56
SNHG5-217	ENST00000623650	SIN3A	Q96ST3	1273 aa		11.54	□□□□□ -0.56
SNHG5-217	ENST00000623650	GOPC	Q9HD26	462 aa		11.54	□□□□□ -0.56
SNHG5-217	ENST00000623650	ADGRG1	Q9Y653	693 aa		11.54	□□□□□ -0.56
SNHG5-217	ENST00000623650	PREX1	Q8TCU6	1659 aa		11.54	□□□□□ -0.56
SNHG5-217	ENST00000623650	PRSS12	P56730	875 aa		11.53	□□□□□ -0.56
SNHG5-217	ENST00000623650	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.53	□□□□□ -0.56
SNHG5-217	ENST00000623650	PXYLP1	Q8TE99	480 aa		11.53	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms