RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 TULP4Q9NRJ4 1543 aa23.72■■□□□ 1.39
CD99-211ENST00000623253 TRPM3Q9HCF6 1732 aaPredicted RBP23.72■■□□□ 1.39
CD99-211ENST00000623253 FAM182BQ5T319 152 aa23.7■■□□□ 1.38
CD99-211ENST00000623253 PRDM11Q9NQV5 511 aa23.7■■□□□ 1.38
CD99-211ENST00000623253 PSDA5PKW4 1024 aaPredicted RBP23.69■■□□□ 1.38
CD99-211ENST00000623253 COL14A1Q05707 1796 aaKnown RBP23.68■■□□□ 1.38
CD99-211ENST00000623253 NRAPQ86VF7 1730 aa23.68■■□□□ 1.38
CD99-211ENST00000623253 ALS2Q96Q42 1657 aa23.68■■□□□ 1.38
CD99-211ENST00000623253 SPATA31A5Q5VU36 1347 aa23.67■■□□□ 1.38
CD99-211ENST00000623253 SPATA31A7Q8IWB4 1347 aa23.67■■□□□ 1.38
CD99-211ENST00000623253 NUDT16Q96DE0 195 aaKnown RBP23.67■■□□□ 1.38
CD99-211ENST00000623253 STAC3Q96MF2 364 aa23.67■■□□□ 1.38
CD99-211ENST00000623253 EN1Q05925 392 aaPredicted RBP23.65■■□□□ 1.38
CD99-211ENST00000623253 CHRNA2Q15822 529 aa23.64■■□□□ 1.37
CD99-211ENST00000623253 NUTM2GQ5VZR2 741 aa23.64■■□□□ 1.37
CD99-211ENST00000623253 STRN4Q9NRL3 753 aa23.64■■□□□ 1.37
CD99-211ENST00000623253 KIAA0232Q92628 1395 aa23.63■■□□□ 1.37
CD99-211ENST00000623253 ZC3H6P61129 1189 aaKnown RBP23.62■■□□□ 1.37
CD99-211ENST00000623253 CDK19Q9BWU1 502 aa23.62■■□□□ 1.37
CD99-211ENST00000623253 ATP7BP35670 1465 aa23.6■■□□□ 1.37
CD99-211ENST00000623253 HRCP23327 699 aa23.59■■□□□ 1.37
CD99-211ENST00000623253 USP35Q9P2H5 1018 aa23.59■■□□□ 1.37
CD99-211ENST00000623253 SPATA31A1Q5TZJ5 1347 aa23.59■■□□□ 1.37
CD99-211ENST00000623253 EVA1CP58658 441 aa23.58■■□□□ 1.37
CD99-211ENST00000623253 ARHGEF28Q8N1W1 1705 aaKnown RBP23.57■■□□□ 1.36
CD99-211ENST00000623253 CRYBG1Q9Y4K1 1723 aa23.57■■□□□ 1.36
CD99-211ENST00000623253 ACEP12821 1306 aa23.57■■□□□ 1.36
CD99-211ENST00000623253 ITSN1Q15811 1721 aa23.56■■□□□ 1.36
CD99-211ENST00000623253 R3HDM1Q15032 1099 aaKnown RBP23.56■■□□□ 1.36
CD99-211ENST00000623253 NBPF8Q3BBV2 869 aa23.56■■□□□ 1.36
CD99-211ENST00000623253 CCDC61Q9Y6R9 512 aa23.56■■□□□ 1.36
CD99-211ENST00000623253 TRIM37O94972 964 aa23.55■■□□□ 1.36
CD99-211ENST00000623253 RGPD1P0DJD0 1748 aa23.55■■□□□ 1.36
CD99-211ENST00000623253 EZH2Q15910 746 aaKnown RBP23.54■■□□□ 1.36
CD99-211ENST00000623253 FAM196AQ6ZSG2 479 aa23.54■■□□□ 1.36
CD99-211ENST00000623253 ABTB2Q8N961 1025 aa23.54■■□□□ 1.36
CD99-211ENST00000623253 LRP5O75197 1615 aa23.54■■□□□ 1.36
CD99-211ENST00000623253 THSD7AQ9UPZ6 1657 aa23.54■■□□□ 1.36
CD99-211ENST00000623253 POLR3AO14802 1390 aaPredicted RBP23.52■■□□□ 1.36
CD99-211ENST00000623253 PDE3BQ13370 1112 aa23.51■■□□□ 1.35
CD99-211ENST00000623253 PHRF1Q9P1Y6 1649 aaKnown RBP23.51■■□□□ 1.35
CD99-211ENST00000623253 PLEKHG3A1L390 1219 aa23.5■■□□□ 1.35
CD99-211ENST00000623253 APBA3O96018 575 aa23.5■■□□□ 1.35
CD99-211ENST00000623253 SRPK2P78362 688 aaKnown RBP23.5■■□□□ 1.35
CD99-211ENST00000623253 NBPF1Q3BBV0 1214 aa23.49■■□□□ 1.35
CD99-211ENST00000623253 LARP1Q6PKG0 1096 aaKnown RBP23.48■■□□□ 1.35
CD99-211ENST00000623253 DISP2A7MBM2 1401 aa23.48■■□□□ 1.35
CD99-211ENST00000623253 CAMKK2Q96RR4 588 aa23.47■■□□□ 1.35
CD99-211ENST00000623253 SSH2Q76I76 1423 aa23.47■■□□□ 1.35
CD99-211ENST00000623253 BARGINQ6ZT62 677 aa23.46■■□□□ 1.35
CD99-211ENST00000623253 TNS1Q9HBL0 1735 aaKnown RBP23.45■■□□□ 1.34
CD99-211ENST00000623253 ZBTB7CA1YPR0 619 aa23.45■■□□□ 1.34
CD99-211ENST00000623253 NLRP13Q86W25 1043 aa23.45■■□□□ 1.34
CD99-211ENST00000623253 TCP11L2Q8N4U5 519 aa23.45■■□□□ 1.34
CD99-211ENST00000623253 CABP2Q9NPB3 220 aa23.45■■□□□ 1.34
CD99-211ENST00000623253 TOPAZ1Q8N9V7 1692 aa23.44■■□□□ 1.34
CD99-211ENST00000623253 PPIP5K1Q6PFW1 1433 aa23.43■■□□□ 1.34
CD99-211ENST00000623253 GCP02774 474 aa23.43■■□□□ 1.34
CD99-211ENST00000623253 CAMTA1Q9Y6Y1 1673 aa23.43■■□□□ 1.34
CD99-211ENST00000623253 CENPJQ9HC77 1338 aaPredicted RBP23.42■■□□□ 1.34
CD99-211ENST00000623253 NRKQ7Z2Y5 1582 aa23.42■■□□□ 1.34
CD99-211ENST00000623253 CPDO75976 1380 aa23.41■■□□□ 1.34
CD99-211ENST00000623253 USP19O94966 1318 aa23.41■■□□□ 1.34
CD99-211ENST00000623253 KIAA1210Q9ULL0 1709 aa23.4■■□□□ 1.34
CD99-211ENST00000623253 PARD3Q8TEW0 1356 aa23.4■■□□□ 1.34
CD99-211ENST00000623253 NBPF14Q5TI25 921 aa23.38■■□□□ 1.33
CD99-211ENST00000623253 CABP1Q9NZU7 370 aa23.38■■□□□ 1.33
CD99-211ENST00000623253 THRAP3Q9Y2W1 955 aaKnown RBP23.38■■□□□ 1.33
CD99-211ENST00000623253 NLRP6P59044 892 aa23.37■■□□□ 1.33
CD99-211ENST00000623253 LMO7Q8WWI1 1683 aa23.35■■□□□ 1.33
CD99-211ENST00000623253 COL5A2P05997 1499 aaPredicted RBP23.34■■□□□ 1.33
CD99-211ENST00000623253 BRD4O60885 1362 aaPredicted RBP23.32■■□□□ 1.32
CD99-211ENST00000623253 CRB1P82279 1406 aa23.32■■□□□ 1.32
CD99-211ENST00000623253 TOM1L2Q6ZVM7 507 aa23.31■■□□□ 1.32
CD99-211ENST00000623253 USP6P35125 1406 aa23.31■■□□□ 1.32
CD99-211ENST00000623253 DDB1Q16531 1140 aa23.29■■□□□ 1.32
CD99-211ENST00000623253 QRICH2Q9H0J4 1663 aa23.28■■□□□ 1.32
CD99-211ENST00000623253 AATKQ6ZMQ8 1374 aa23.28■■□□□ 1.32
CD99-211ENST00000623253 C11orf95C9JLR9 678 aaPredicted RBP23.28■■□□□ 1.32
CD99-211ENST00000623253 L3MBTL2Q969R5 705 aa23.28■■□□□ 1.32
CD99-211ENST00000623253 EVC2Q86UK5 1308 aa23.28■■□□□ 1.32
CD99-211ENST00000623253 SOX12O15370 315 aa23.27■■□□□ 1.32
CD99-211ENST00000623253 RREB1Q92766 1687 aa23.27■■□□□ 1.32
CD99-211ENST00000623253 NUP188Q5SRE5 1749 aa23.26■■□□□ 1.31
CD99-211ENST00000623253 PPP1R1BQ9UD71 204 aaPredicted RBP23.26■■□□□ 1.31
CD99-211ENST00000623253 OVOS2A0A0G2JMS6 1433 aa23.25■■□□□ 1.31
CD99-211ENST00000623253 OVOS2A0A0J9YW53 1432 aa23.25■■□□□ 1.31
CD99-211ENST00000623253 OVOS2Q6IE36 1432 aa23.25■■□□□ 1.31
CD99-211ENST00000623253 PARP4Q9UKK3 1724 aaKnown RBP23.25■■□□□ 1.31
CD99-211ENST00000623253 SPON1Q9HCB6 807 aa23.24■■□□□ 1.31
CD99-211ENST00000623253 AXIN2Q9Y2T1 843 aa23.24■■□□□ 1.31
CD99-211ENST00000623253 SLIT3O75094 1523 aa23.23■■□□□ 1.31
CD99-211ENST00000623253 CSB-PGBD3P0DP91 1061 aa23.23■■□□□ 1.31
CD99-211ENST00000623253 WDR17Q8IZU2 1322 aa23.22■■□□□ 1.31
CD99-211ENST00000623253 KCNQ2O43526 872 aa23.21■■□□□ 1.31
CD99-211ENST00000623253 NEUROD1Q13562 356 aa23.21■■□□□ 1.31
CD99-211ENST00000623253 KCNH5Q8NCM2 988 aa23.21■■□□□ 1.31
CD99-211ENST00000623253 SIN3AQ96ST3 1273 aa23.21■■□□□ 1.31
CD99-211ENST00000623253 ZNF692Q9BU19 519 aaPredicted RBP23.21■■□□□ 1.31
CD99-211ENST00000623253 TTC21BQ7Z4L5 1316 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms