RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 TMEM132AQ24JP5 1023 aa11.85□□□□□ -0.51
CLTCL1-211ENST00000621271 CLASRPQ8N2M8 674 aaKnown RBP11.85□□□□□ -0.51
CLTCL1-211ENST00000621271 CABP1Q9NZU7 370 aa11.85□□□□□ -0.51
CLTCL1-211ENST00000621271 ZC3H6P61129 1189 aaKnown RBP11.85□□□□□ -0.51
CLTCL1-211ENST00000621271 RTEL1-TNFRSF6BF6WH68 1400 aa11.84□□□□□ -0.51
CLTCL1-211ENST00000621271 IPO7O95373 1038 aaKnown RBP11.84□□□□□ -0.51
CLTCL1-211ENST00000621271 ADAMTS2O95450 1211 aa11.84□□□□□ -0.51
CLTCL1-211ENST00000621271 PRKAR2BP31323 418 aa11.84□□□□□ -0.51
CLTCL1-211ENST00000621271 MPHOSPH8Q99549 860 aa11.84□□□□□ -0.51
CLTCL1-211ENST00000621271 DDX11L8A8MPP1 907 aa11.84□□□□□ -0.51
CLTCL1-211ENST00000621271 WDHD1O75717 1129 aaPredicted RBP11.84□□□□□ -0.51
CLTCL1-211ENST00000621271 FOXD4L6Q3SYB3 417 aaPredicted RBP11.84□□□□□ -0.51
CLTCL1-211ENST00000621271 FOXD4L3Q6VB84 417 aaPredicted RBP11.84□□□□□ -0.51
CLTCL1-211ENST00000621271 FSD1Q9BTV5 496 aa11.83□□□□□ -0.52
CLTCL1-211ENST00000621271 ATP2B2Q01814 1243 aa11.83□□□□□ -0.52
CLTCL1-211ENST00000621271 CCDC158Q5M9N0 1113 aa11.83□□□□□ -0.52
CLTCL1-211ENST00000621271 BIVM-ERCC5R4GMW8 1640 aa11.83□□□□□ -0.52
CLTCL1-211ENST00000621271 NCOA2Q15596 1464 aa11.83□□□□□ -0.52
CLTCL1-211ENST00000621271 HDGFL1Q5TGJ6 251 aa11.83□□□□□ -0.52
CLTCL1-211ENST00000621271 SULT6B1Q6IMI4 303 aa11.83□□□□□ -0.52
CLTCL1-211ENST00000621271 CASKIN1Q8WXD9 1431 aa11.82□□□□□ -0.52
CLTCL1-211ENST00000621271 GOLGA6L1Q8N7Z2 621 aa11.82□□□□□ -0.52
CLTCL1-211ENST00000621271 BICDL1Q6ZP65 573 aa11.82□□□□□ -0.52
CLTCL1-211ENST00000621271 SURF6O75683 361 aaKnown RBP11.82□□□□□ -0.52
CLTCL1-211ENST00000621271 KCNH5Q8NCM2 988 aa11.82□□□□□ -0.52
CLTCL1-211ENST00000621271 PRXQ9BXM0 1461 aa11.82□□□□□ -0.52
CLTCL1-211ENST00000621271 RPGRIP1LQ68CZ1 1315 aa11.82□□□□□ -0.52
CLTCL1-211ENST00000621271 CRBNQ96SW2 442 aa11.82□□□□□ -0.52
CLTCL1-211ENST00000621271 DNAJC2Q99543 621 aaKnown RBP11.82□□□□□ -0.52
CLTCL1-211ENST00000621271 TTC39AQ5SRH9 613 aa11.81□□□□□ -0.52
CLTCL1-211ENST00000621271 INTS3Q68E01 1043 aaKnown RBP11.81□□□□□ -0.52
CLTCL1-211ENST00000621271 HFM1A2PYH4 1435 aa11.81□□□□□ -0.52
CLTCL1-211ENST00000621271 NINLQ9Y2I6 1382 aa11.81□□□□□ -0.52
CLTCL1-211ENST00000621271 EFCAB5A4FU69 1503 aa11.8□□□□□ -0.52
CLTCL1-211ENST00000621271 ZSCAN29Q8IWY8 852 aaPredicted RBP11.8□□□□□ -0.52
CLTCL1-211ENST00000621271 TMOD2Q9NZR1 351 aa11.8□□□□□ -0.52
CLTCL1-211ENST00000621271 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.8□□□□□ -0.52
CLTCL1-211ENST00000621271 STARD3NLO95772 234 aa11.8□□□□□ -0.52
CLTCL1-211ENST00000621271 CD109Q6YHK3 1445 aa11.8□□□□□ -0.52
CLTCL1-211ENST00000621271 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.8□□□□□ -0.526e-6■■■□□ 19.2
CLTCL1-211ENST00000621271 NUP160Q12769 1436 aa11.8□□□□□ -0.52
CLTCL1-211ENST00000621271 TEX14Q8IWB6 1497 aa11.8□□□□□ -0.52
CLTCL1-211ENST00000621271 CT47A1Q5JQC4 288 aaPredicted RBP11.8□□□□□ -0.52
CLTCL1-211ENST00000621271 ERC1Q8IUD2 1116 aa11.8□□□□□ -0.52
CLTCL1-211ENST00000621271 CCDC57Q2TAC2 916 aa11.79□□□□□ -0.52
CLTCL1-211ENST00000621271 BICD2Q8TD16 824 aa11.79□□□□□ -0.52
CLTCL1-211ENST00000621271 C9orf84Q5VXU9 1444 aa11.79□□□□□ -0.52
CLTCL1-211ENST00000621271 ZPR1O75312 459 aa11.79□□□□□ -0.52
CLTCL1-211ENST00000621271 CNTROBQ8N137 903 aa11.79□□□□□ -0.52
CLTCL1-211ENST00000621271 MYL6BP14649 208 aa11.79□□□□□ -0.52
CLTCL1-211ENST00000621271 PAXIP1Q6ZW49 1069 aaPredicted RBP11.79□□□□□ -0.52
CLTCL1-211ENST00000621271 ARID3AQ99856 593 aa11.79□□□□□ -0.52
CLTCL1-211ENST00000621271 ZNF652Q9Y2D9 606 aa11.79□□□□□ -0.52
CLTCL1-211ENST00000621271 VPS37CA5D8V6 355 aaPredicted RBP11.79□□□□□ -0.52
CLTCL1-211ENST00000621271 RRP12Q5JTH9 1297 aaKnown RBP11.79□□□□□ -0.52
CLTCL1-211ENST00000621271 PPP6R1Q9UPN7 881 aa11.79□□□□□ -0.52
CLTCL1-211ENST00000621271 SMC3Q9UQE7 1217 aa11.79□□□□□ -0.52
CLTCL1-211ENST00000621271 ODF2Q5BJF6 829 aa11.78□□□□□ -0.52
CLTCL1-211ENST00000621271 PAF1Q8N7H5 531 aa11.78□□□□□ -0.52
CLTCL1-211ENST00000621271 NACAP1Q9BZK3 213 aa11.78□□□□□ -0.52
CLTCL1-211ENST00000621271 CNTLNQ9NXG0 1405 aa11.78□□□□□ -0.52
CLTCL1-211ENST00000621271 TCP11L2Q8N4U5 519 aa11.78□□□□□ -0.52
CLTCL1-211ENST00000621271 SLC12A5Q9H2X9 1139 aa11.78□□□□□ -0.52
CLTCL1-211ENST00000621271 PSMA5P28066 241 aa11.77□□□□□ -0.52
CLTCL1-211ENST00000621271 FOSBP53539 338 aa11.77□□□□□ -0.52
CLTCL1-211ENST00000621271 SKOR2Q2VWA4 1001 aaPredicted RBP11.77□□□□□ -0.52
CLTCL1-211ENST00000621271 TWISTNBQ3B726 338 aaPredicted RBP11.77□□□□□ -0.52
CLTCL1-211ENST00000621271 VSIG10Q8N0Z9 540 aa11.77□□□□□ -0.52
CLTCL1-211ENST00000621271 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.77□□□□□ -0.529e-9■■■■■ 111.8
CLTCL1-211ENST00000621271 CCDC7Q96M83 1385 aa11.77□□□□□ -0.52
CLTCL1-211ENST00000621271 CCDC70Q6NSX1 233 aa11.77□□□□□ -0.53
CLTCL1-211ENST00000621271 TMOD3Q9NYL9 352 aa11.77□□□□□ -0.53
CLTCL1-211ENST00000621271 LNPKQ9C0E8 428 aa11.77□□□□□ -0.53
CLTCL1-211ENST00000621271 ADAMTS12P58397 1594 aa11.77□□□□□ -0.53
CLTCL1-211ENST00000621271 TROQ12816 1431 aaPredicted RBP11.77□□□□□ -0.53
CLTCL1-211ENST00000621271 DDX49Q9Y6V7 483 aaKnown RBP11.76□□□□□ -0.53
CLTCL1-211ENST00000621271 LRRC9Q6ZRR7 1453 aa11.76□□□□□ -0.53
CLTCL1-211ENST00000621271 IGHMBP2P38935 993 aaKnown RBP11.76□□□□□ -0.53
CLTCL1-211ENST00000621271 EPS15P42566 896 aa11.76□□□□□ -0.53
CLTCL1-211ENST00000621271 CCDC61Q9Y6R9 512 aa11.76□□□□□ -0.53
CLTCL1-211ENST00000621271 HIP1O00291 1037 aa11.76□□□□□ -0.53
CLTCL1-211ENST00000621271 BTBD11A6QL63 1104 aa11.76□□□□□ -0.53
CLTCL1-211ENST00000621271 TOM1O60784 492 aa11.76□□□□□ -0.53
CLTCL1-211ENST00000621271 NFKBIBQ15653 356 aa11.76□□□□□ -0.53
CLTCL1-211ENST00000621271 SLC4A2P04920 1241 aa11.75□□□□□ -0.53
CLTCL1-211ENST00000621271 ATAD2Q6PL18 1390 aa11.75□□□□□ -0.53
CLTCL1-211ENST00000621271 ANKRD30BQ9BXX2 1392 aa11.75□□□□□ -0.53
CLTCL1-211ENST00000621271 UBAP1LF5GYI3 381 aa11.75□□□□□ -0.53
CLTCL1-211ENST00000621271 CDK5RAP3Q96JB5 506 aa11.75□□□□□ -0.53
CLTCL1-211ENST00000621271 KIF7Q2M1P5 1343 aa11.75□□□□□ -0.53
CLTCL1-211ENST00000621271 CCDC73Q6ZRK6 1079 aa11.75□□□□□ -0.53
CLTCL1-211ENST00000621271 NUDT16Q96DE0 195 aaKnown RBP11.75□□□□□ -0.53
CLTCL1-211ENST00000621271 SRCIN1Q9C0H9 1055 aa11.75□□□□□ -0.53
CLTCL1-211ENST00000621271 ERBINQ96RT1 1412 aa11.75□□□□□ -0.53
CLTCL1-211ENST00000621271 GNAI2P04899 355 aa11.74□□□□□ -0.53
CLTCL1-211ENST00000621271 AAMPQ13685 434 aa11.74□□□□□ -0.53
CLTCL1-211ENST00000621271 ARHGEF11O15085 1522 aa11.74□□□□□ -0.53
CLTCL1-211ENST00000621271 OFD1O75665 1012 aa11.74□□□□□ -0.53
CLTCL1-211ENST00000621271 ZSCAN25Q6NSZ9 544 aa11.74□□□□□ -0.53
CLTCL1-211ENST00000621271 CCAR2Q8N163 923 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms