RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 ANKLE2Q86XL3 938 aa24.3■■□□□ 1.48
FGFR1-241ENST00000619564 C9orf84Q5VXU9 1444 aa24.3■■□□□ 1.48
FGFR1-241ENST00000619564 CT47A1Q5JQC4 288 aaPredicted RBP24.3■■□□□ 1.48
FGFR1-241ENST00000619564 CCDC158Q5M9N0 1113 aa24.29■■□□□ 1.48
FGFR1-241ENST00000619564 HDGFL1Q5TGJ6 251 aa24.29■■□□□ 1.48
FGFR1-241ENST00000619564 NUTM2BA6NNL0 878 aaPredicted RBP24.29■■□□□ 1.48
FGFR1-241ENST00000619564 NUTM2EB1AL46 878 aaPredicted RBP24.29■■□□□ 1.48
FGFR1-241ENST00000619564 GNAI2P04899 355 aa24.29■■□□□ 1.48
FGFR1-241ENST00000619564 NUTM2AQ8IVF1 878 aaPredicted RBP24.29■■□□□ 1.48
FGFR1-241ENST00000619564 TTC39AQ5SRH9 613 aa24.29■■□□□ 1.48
FGFR1-241ENST00000619564 OLFM4Q6UX06 510 aa24.29■■□□□ 1.48
FGFR1-241ENST00000619564 CABP1Q9NZU7 370 aa24.29■■□□□ 1.48
FGFR1-241ENST00000619564 SULT6B1Q6IMI4 303 aa24.28■■□□□ 1.48
FGFR1-241ENST00000619564 IFT140Q96RY7 1462 aa24.28■■□□□ 1.48
FGFR1-241ENST00000619564 ZNF530Q6P9A1 599 aaPredicted RBP24.28■■□□□ 1.48
FGFR1-241ENST00000619564 DDX54Q8TDD1 881 aaKnown RBP24.28■■□□□ 1.48
FGFR1-241ENST00000619564 EPS15P42566 896 aa24.27■■□□□ 1.48
FGFR1-241ENST00000619564 NAP1L1P55209 391 aaKnown RBP24.27■■□□□ 1.48
FGFR1-241ENST00000619564 NAT10Q9H0A0 1025 aaKnown RBP24.26■■□□□ 1.47
FGFR1-241ENST00000619564 POGZQ7Z3K3 1410 aa24.26■■□□□ 1.47
FGFR1-241ENST00000619564 CFTRP13569 1480 aa24.26■■□□□ 1.47
FGFR1-241ENST00000619564 RTEL1-TNFRSF6BF6WH68 1400 aa24.26■■□□□ 1.47
FGFR1-241ENST00000619564 SLC12A5Q9H2X9 1139 aa24.25■■□□□ 1.47
FGFR1-241ENST00000619564 ODF2Q5BJF6 829 aa24.25■■□□□ 1.47
FGFR1-241ENST00000619564 SLC4A2P04920 1241 aa24.25■■□□□ 1.47
FGFR1-241ENST00000619564 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.25■■□□□ 1.47
FGFR1-241ENST00000619564 NBPF1Q3BBV0 1214 aa24.25■■□□□ 1.47
FGFR1-241ENST00000619564 SDF4Q9BRK5 362 aa24.24■■□□□ 1.47
FGFR1-241ENST00000619564 CCAR1Q8IX12 1150 aaKnown RBP24.24■■□□□ 1.47
FGFR1-241ENST00000619564 OFD1O75665 1012 aa24.23■■□□□ 1.47
FGFR1-241ENST00000619564 PPP1R1BQ9UD71 204 aaPredicted RBP24.23■■□□□ 1.47
FGFR1-241ENST00000619564 RRP12Q5JTH9 1297 aaKnown RBP24.23■■□□□ 1.47
FGFR1-241ENST00000619564 KDM4AO75164 1064 aa24.23■■□□□ 1.47
FGFR1-241ENST00000619564 CCT4P50991 539 aaKnown RBP24.23■■□□□ 1.47
FGFR1-241ENST00000619564 GCC1Q96CN9 775 aa24.23■■□□□ 1.47
FGFR1-241ENST00000619564 KIAA1107Q9UPP5 1409 aa24.22■■□□□ 1.47
FGFR1-241ENST00000619564 PRDM11Q9NQV5 511 aa24.22■■□□□ 1.47
FGFR1-241ENST00000619564 ERICH3Q5RHP9 1530 aa24.21■■□□□ 1.47
FGFR1-241ENST00000619564 EHBP1L1Q8N3D4 1523 aa24.21■■□□□ 1.47
FGFR1-241ENST00000619564 SETQ01105 290 aaPredicted RBP24.21■■□□□ 1.47
FGFR1-241ENST00000619564 RPGRIP1LQ68CZ1 1315 aa24.21■■□□□ 1.47
FGFR1-241ENST00000619564 SLC26A8Q96RN1 970 aa24.2■■□□□ 1.46
FGFR1-241ENST00000619564 SRCIN1Q9C0H9 1055 aa24.2■■□□□ 1.46
FGFR1-241ENST00000619564 CDK5RAP3Q96JB5 506 aa24.2■■□□□ 1.46
FGFR1-241ENST00000619564 NOB1Q9ULX3 412 aaKnown RBP24.2■■□□□ 1.46
FGFR1-241ENST00000619564 EFCAB5A4FU69 1503 aa24.2■■□□□ 1.46
FGFR1-241ENST00000619564 PDCP20941 246 aa24.19■■□□□ 1.46
FGFR1-241ENST00000619564 MCM2P49736 904 aa24.18■■□□□ 1.46
FGFR1-241ENST00000619564 TROQ12816 1431 aaPredicted RBP24.18■■□□□ 1.46
FGFR1-241ENST00000619564 CDCA7LQ96GN5 454 aa24.18■■□□□ 1.46
FGFR1-241ENST00000619564 NACAP1Q9BZK3 213 aa24.18■■□□□ 1.46
FGFR1-241ENST00000619564 C1orf115Q9H7X2 142 aa24.18■■□□□ 1.46
FGFR1-241ENST00000619564 ATP2B1P20020 1258 aa24.18■■□□□ 1.46
FGFR1-241ENST00000619564 RAPGEF3O95398 923 aa24.18■■□□□ 1.46
FGFR1-241ENST00000619564 TXLNAP40222 546 aa24.18■■□□□ 1.46
FGFR1-241ENST00000619564 TSR2Q969E8 191 aaKnown RBP24.17■■□□□ 1.46
FGFR1-241ENST00000619564 TMEM132AQ24JP5 1023 aa24.17■■□□□ 1.46
FGFR1-241ENST00000619564 NEK4P51957 841 aa24.17■■□□□ 1.46
FGFR1-241ENST00000619564 MPHOSPH8Q99549 860 aa24.17■■□□□ 1.46
FGFR1-241ENST00000619564 FANCIQ9NVI1 1328 aa24.17■■□□□ 1.46
FGFR1-241ENST00000619564 PDE3AQ14432 1141 aa24.16■■□□□ 1.46
FGFR1-241ENST00000619564 ERBINQ96RT1 1412 aa24.16■■□□□ 1.46
FGFR1-241ENST00000619564 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.16■■□□□ 1.46
FGFR1-241ENST00000619564 CCDC57Q2TAC2 916 aa24.15■■□□□ 1.46
FGFR1-241ENST00000619564 MYL6BP14649 208 aa24.15■■□□□ 1.46
FGFR1-241ENST00000619564 WWC2Q6AWC2 1192 aa24.15■■□□□ 1.46
FGFR1-241ENST00000619564 IFT57Q9NWB7 429 aa24.15■■□□□ 1.46
FGFR1-241ENST00000619564 ATAD2Q6PL18 1390 aa24.15■■□□□ 1.46
FGFR1-241ENST00000619564 PDZRN3Q9UPQ7 1066 aa24.15■■□□□ 1.46
FGFR1-241ENST00000619564 ZFYVE27Q5T4F4 411 aa24.14■■□□□ 1.46
FGFR1-241ENST00000619564 SIL1Q9H173 461 aa24.14■■□□□ 1.46
FGFR1-241ENST00000619564 ATP2B2Q01814 1243 aa24.14■■□□□ 1.45
FGFR1-241ENST00000619564 LRRCC1Q9C099 1032 aa24.14■■□□□ 1.45
FGFR1-241ENST00000619564 PDILTQ8N807 584 aa24.14■■□□□ 1.45
FGFR1-241ENST00000619564 KINO60870 393 aaKnown RBP24.14■■□□□ 1.45
FGFR1-241ENST00000619564 CT47B1P0C2W7 299 aaPredicted RBP24.14■■□□□ 1.45
FGFR1-241ENST00000619564 ZNF396Q96N95 335 aaPredicted RBP24.13■■□□□ 1.45
FGFR1-241ENST00000619564 RUFY1Q96T51 708 aa24.13■■□□□ 1.45
FGFR1-241ENST00000619564 CDR1P51861 262 aa24.13■■□□□ 1.45
FGFR1-241ENST00000619564 ZSCAN25Q6NSZ9 544 aa24.13■■□□□ 1.45
FGFR1-241ENST00000619564 MNS1Q8NEH6 495 aa24.13■■□□□ 1.45
FGFR1-241ENST00000619564 RABEP1Q15276 862 aa24.13■■□□□ 1.45
FGFR1-241ENST00000619564 ANKRD30BQ9BXX2 1392 aa24.12■■□□□ 1.45
FGFR1-241ENST00000619564 SNAPC4Q5SXM2 1469 aa24.12■■□□□ 1.45
FGFR1-241ENST00000619564 ARAP1Q96P48 1450 aa24.12■■□□□ 1.45
FGFR1-241ENST00000619564 HSP90AA2PQ14568 343 aaPredicted RBP24.12■■□□□ 1.45
FGFR1-241ENST00000619564 WDR63Q8IWG1 891 aa24.12■■□□□ 1.45
FGFR1-241ENST00000619564 LETM1O95202 739 aaPredicted RBP24.12■■□□□ 1.45
FGFR1-241ENST00000619564 KRT18P05783 430 aaKnown RBP24.12■■□□□ 1.45
FGFR1-241ENST00000619564 CCDC173Q0VFZ6 552 aa24.12■■□□□ 1.45
FGFR1-241ENST00000619564 NESP48681 1621 aa24.12■■□□□ 1.45
FGFR1-241ENST00000619564 HECW1Q76N89 1606 aa24.11■■□□□ 1.45
FGFR1-241ENST00000619564 PIP4K2BP78356 416 aa24.11■■□□□ 1.45
FGFR1-241ENST00000619564 RSPH6AQ9H0K4 717 aa24.11■■□□□ 1.45
FGFR1-241ENST00000619564 BTBD11A6QL63 1104 aa24.1■■□□□ 1.45
FGFR1-241ENST00000619564 HMGB2P26583 209 aaKnown RBP24.09■■□□□ 1.45
FGFR1-241ENST00000619564 TRIM22Q8IYM9 498 aa24.09■■□□□ 1.45
FGFR1-241ENST00000619564 STK38Q15208 465 aa24.09■■□□□ 1.45
FGFR1-241ENST00000619564 CYP46A1Q9Y6A2 500 aa24.09■■□□□ 1.45
FGFR1-241ENST00000619564 MAGEC2Q9UBF1 373 aaPredicted RBP24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms