RNA–Protein interactions for RNA: ENST00000619121.4

CSMD2-210, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD2, Length 13,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-210ENST00000619121 CCDC150Q8NCX0 1101 aa8.6□□□□□ -1.03
CSMD2-210ENST00000619121 SPG7Q9UQ90 795 aa8.6□□□□□ -1.03
CSMD2-210ENST00000619121 GBP2P32456 591 aaPredicted RBP8.6□□□□□ -1.03
CSMD2-210ENST00000619121 STK26Q9P289 416 aa8.6□□□□□ -1.03
CSMD2-210ENST00000619121 ATAD2Q6PL18 1390 aa8.6□□□□□ -1.03
CSMD2-210ENST00000619121 HOXA7P31268 230 aaPredicted RBP8.59□□□□□ -1.03
CSMD2-210ENST00000619121 RBM26Q5T8P6 1007 aaKnown RBP8.59□□□□□ -1.03
CSMD2-210ENST00000619121 GTPBP4Q9BZE4 634 aaKnown RBP8.59□□□□□ -1.03
CSMD2-210ENST00000619121 PPM1EQ8WY54 764 aa8.59□□□□□ -1.03
CSMD2-210ENST00000619121 OFD1O75665 1012 aa8.59□□□□□ -1.03
CSMD2-210ENST00000619121 AQRO60306 1485 aaKnown RBP eCLIP8.59□□□□□ -1.03
CSMD2-210ENST00000619121 SASS6Q6UVJ0 657 aa8.59□□□□□ -1.03
CSMD2-210ENST00000619121 CTNNA3Q9UI47 895 aa8.59□□□□□ -1.03
CSMD2-210ENST00000619121 CASKIN1Q8WXD9 1431 aa8.59□□□□□ -1.03
CSMD2-210ENST00000619121 POLR3GO15318 223 aaPredicted RBP8.59□□□□□ -1.03
CSMD2-210ENST00000619121 ZBED9Q6R2W3 1325 aa8.59□□□□□ -1.03
CSMD2-210ENST00000619121 PPP4R3AQ6IN85 833 aa8.59□□□□□ -1.03
CSMD2-210ENST00000619121 BCL11BQ9C0K0 894 aaPredicted RBP8.59□□□□□ -1.03
CSMD2-210ENST00000619121 MAGEC2Q9UBF1 373 aaPredicted RBP8.59□□□□□ -1.03
CSMD2-210ENST00000619121 ZNF396Q96N95 335 aaPredicted RBP8.59□□□□□ -1.03
CSMD2-210ENST00000619121 CERS3Q8IU89 383 aa8.59□□□□□ -1.04
CSMD2-210ENST00000619121 DZIP1LQ8IYY4 767 aaKnown RBP8.58□□□□□ -1.04
CSMD2-210ENST00000619121 CCDC178Q5BJE1 867 aa8.58□□□□□ -1.04
CSMD2-210ENST00000619121 TEX13AQ9BXU3 409 aaPredicted RBP8.58□□□□□ -1.04
CSMD2-210ENST00000619121 GOLGA6L10A6NI86 522 aa8.58□□□□□ -1.04
CSMD2-210ENST00000619121 AEBP1Q8IUX7 1158 aa8.58□□□□□ -1.04
CSMD2-210ENST00000619121 VIMP08670 466 aaKnown RBP8.58□□□□□ -1.04
CSMD2-210ENST00000619121 TOMM22Q9NS69 142 aa8.58□□□□□ -1.04
CSMD2-210ENST00000619121 DIAPH1O60610 1272 aaKnown RBP8.58□□□□□ -1.04
CSMD2-210ENST00000619121 KRT32Q14532 448 aa8.58□□□□□ -1.04
CSMD2-210ENST00000619121 RUNDC1Q96C34 613 aa8.58□□□□□ -1.04
CSMD2-210ENST00000619121 CDK5RAP3Q96JB5 506 aa8.58□□□□□ -1.04
CSMD2-210ENST00000619121 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.58□□□□□ -1.04
CSMD2-210ENST00000619121 INCENPQ9NQS7 918 aa8.58□□□□□ -1.04
CSMD2-210ENST00000619121 CCDC196A0A1B0GTZ2 297 aa8.58□□□□□ -1.04
CSMD2-210ENST00000619121 PES1O00541 588 aaKnown RBP8.58□□□□□ -1.04
CSMD2-210ENST00000619121 CCDC73Q6ZRK6 1079 aa8.58□□□□□ -1.04
CSMD2-210ENST00000619121 CLASRPQ8N2M8 674 aaKnown RBP8.58□□□□□ -1.04
CSMD2-210ENST00000619121 MAP3K1Q13233 1512 aa8.57□□□□□ -1.04
CSMD2-210ENST00000619121 SSFA2P28290 1259 aa8.57□□□□□ -1.04
CSMD2-210ENST00000619121 PHF23Q9BUL5 403 aaPredicted RBP8.57□□□□□ -1.04
CSMD2-210ENST00000619121 TUBB4BP68371 445 aa8.57□□□□□ -1.04
CSMD2-210ENST00000619121 FAM135AQ9P2D6 1515 aa8.57□□□□□ -1.04
CSMD2-210ENST00000619121 CNGA1P29973 690 aa8.57□□□□□ -1.04
CSMD2-210ENST00000619121 CCDC57Q2TAC2 916 aa8.57□□□□□ -1.04
CSMD2-210ENST00000619121 CFAP45Q9UL16 551 aa8.57□□□□□ -1.04
CSMD2-210ENST00000619121 MBD3O95983 291 aa8.57□□□□□ -1.04
CSMD2-210ENST00000619121 RBM19Q9Y4C8 960 aaKnown RBP8.57□□□□□ -1.04
CSMD2-210ENST00000619121 ANKLE2Q86XL3 938 aa8.57□□□□□ -1.04
CSMD2-210ENST00000619121 TRIM22Q8IYM9 498 aa8.57□□□□□ -1.04
CSMD2-210ENST00000619121 HAUS2Q9NVX0 235 aa8.57□□□□□ -1.04
CSMD2-210ENST00000619121 IQGAP2Q13576 1575 aa8.57□□□□□ -1.04
CSMD2-210ENST00000619121 PHAXQ9H814 394 aaKnown RBP8.57□□□□□ -1.04
CSMD2-210ENST00000619121 TMOD2Q9NZR1 351 aa8.57□□□□□ -1.04
CSMD2-210ENST00000619121 TTC12Q9H892 705 aaPredicted RBP8.57□□□□□ -1.04
CSMD2-210ENST00000619121 ZNF330Q9Y3S2 320 aaPredicted RBP8.57□□□□□ -1.04
CSMD2-210ENST00000619121 NFXL1Q6ZNB6 911 aa8.57□□□□□ -1.04
CSMD2-210ENST00000619121 TTC21AQ8NDW8 1320 aa8.56□□□□□ -1.04
CSMD2-210ENST00000619121 STARD3NLO95772 234 aa8.56□□□□□ -1.04
CSMD2-210ENST00000619121 STXBP4Q6ZWJ1 553 aa8.56□□□□□ -1.04
CSMD2-210ENST00000619121 AKAP2Q9Y2D5 859 aa8.56□□□□□ -1.04
CSMD2-210ENST00000619121 RGS3P49796 1198 aa8.56□□□□□ -1.04
CSMD2-210ENST00000619121 CCT4P50991 539 aaKnown RBP8.56□□□□□ -1.04
CSMD2-210ENST00000619121 USP37Q86T82 979 aa8.56□□□□□ -1.04
CSMD2-210ENST00000619121 FGD5Q6ZNL6 1462 aa8.56□□□□□ -1.04
CSMD2-210ENST00000619121 RSPH6AQ9H0K4 717 aa8.56□□□□□ -1.04
CSMD2-210ENST00000619121 NKTRP30414 1462 aaKnown RBP8.55□□□□□ -1.04
CSMD2-210ENST00000619121 LRRC27Q9C0I9 530 aa8.55□□□□□ -1.04
CSMD2-210ENST00000619121 PLEKHH1Q9ULM0 1364 aa8.55□□□□□ -1.04
CSMD2-210ENST00000619121 FAM161AQ3B820 660 aa8.55□□□□□ -1.04
CSMD2-210ENST00000619121 GCC1Q96CN9 775 aa8.55□□□□□ -1.04
CSMD2-210ENST00000619121 CACNA1FO60840 1977 aa8.55□□□□□ -1.04
CSMD2-210ENST00000619121 APPP05067 770 aa8.55□□□□□ -1.04
CSMD2-210ENST00000619121 RIC3Q7Z5B4 369 aa8.55□□□□□ -1.04
CSMD2-210ENST00000619121 NOL7Q9UMY1 257 aaKnown RBP8.55□□□□□ -1.04
CSMD2-210ENST00000619121 HMGN5P82970 282 aaKnown RBP8.55□□□□□ -1.04
CSMD2-210ENST00000619121 HSP90AB2PQ58FF8 381 aa8.54□□□□□ -1.04
CSMD2-210ENST00000619121 ZNF397Q8NF99 534 aaPredicted RBP8.54□□□□□ -1.04
CSMD2-210ENST00000619121 PCMTD1Q96MG8 357 aaPredicted RBP8.54□□□□□ -1.04
CSMD2-210ENST00000619121 SEPT7Q16181 437 aaKnown RBP8.54□□□□□ -1.04
CSMD2-210ENST00000619121 SLC4A10Q6U841 1118 aa8.54□□□□□ -1.04
CSMD2-210ENST00000619121 CBFA2T2O43439 604 aa8.54□□□□□ -1.04
CSMD2-210ENST00000619121 USP5P45974 858 aa8.54□□□□□ -1.04
CSMD2-210ENST00000619121 TATP17735 454 aaPredicted RBP8.54□□□□□ -1.04
CSMD2-210ENST00000619121 STAMBPO95630 424 aa8.54□□□□□ -1.04
CSMD2-210ENST00000619121 CCDC12Q8WUD4 166 aaPredicted RBP8.54□□□□□ -1.04
CSMD2-210ENST00000619121 GOLGA6L10A0A0M3HER8 536 aa8.54□□□□□ -1.04
CSMD2-210ENST00000619121 ZGPATQ8N5A5 531 aaKnown RBP8.53□□□□□ -1.04
CSMD2-210ENST00000619121 CETN1Q12798 172 aa8.53□□□□□ -1.04
CSMD2-210ENST00000619121 AMOTQ4VCS5 1084 aa8.53□□□□□ -1.04
CSMD2-210ENST00000619121 BRD4O60885 1362 aaPredicted RBP8.53□□□□□ -1.04
CSMD2-210ENST00000619121 RBM27Q9P2N5 1060 aaKnown RBP8.53□□□□□ -1.04
CSMD2-210ENST00000619121 GRIPAP1Q4V328 841 aa8.53□□□□□ -1.04
CSMD2-210ENST00000619121 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.53□□□□□ -1.04
CSMD2-210ENST00000619121 V9GYY5 206 aaPredicted RBP8.53□□□□□ -1.04
CSMD2-210ENST00000619121 CCDC172P0C7W6 258 aa8.53□□□□□ -1.04
CSMD2-210ENST00000619121 ANKRD50Q9ULJ7 1429 aa8.53□□□□□ -1.04
CSMD2-210ENST00000619121 TNPO1Q92973 898 aaKnown RBP8.53□□□□□ -1.04
CSMD2-210ENST00000619121 ANKRD18BA2A2Z9 1011 aa8.53□□□□□ -1.04
CSMD2-210ENST00000619121 PLEKHG5O94827 1062 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms