RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 KDM2BQ8NHM5 1336 aa20.1■□□□□ 0.81
SEMA3B-214ENST00000619119 TULP4Q9NRJ4 1543 aa20.1■□□□□ 0.81
SEMA3B-214ENST00000619119 CENPQQ7L2Z9 268 aaPredicted RBP20.09■□□□□ 0.81
SEMA3B-214ENST00000619119 BBXQ8WY36 941 aaPredicted RBP20.09■□□□□ 0.81
SEMA3B-214ENST00000619119 PRDM10Q9NQV6 1147 aa20.09■□□□□ 0.81
SEMA3B-214ENST00000619119 MRE11P49959 708 aa20.09■□□□□ 0.81
SEMA3B-214ENST00000619119 SPRYD3Q8NCJ5 442 aa20.08■□□□□ 0.81
SEMA3B-214ENST00000619119 ALKQ9UM73 1620 aa20.08■□□□□ 0.81
SEMA3B-214ENST00000619119 NPC1L1Q9UHC9 1359 aa20.07■□□□□ 0.8
SEMA3B-214ENST00000619119 TNRQ92752 1358 aa20.06■□□□□ 0.8
SEMA3B-214ENST00000619119 GRPEL1Q9HAV7 217 aa20.05■□□□□ 0.8
SEMA3B-214ENST00000619119 PTPRMP28827 1452 aa20.05■□□□□ 0.8
SEMA3B-214ENST00000619119 CDK19Q9BWU1 502 aa20.04■□□□□ 0.8
SEMA3B-214ENST00000619119 BLMP54132 1417 aaPredicted RBP20.04■□□□□ 0.8
SEMA3B-214ENST00000619119 PLEKHH1Q9ULM0 1364 aa20.04■□□□□ 0.8
SEMA3B-214ENST00000619119 CGNL1Q0VF96 1302 aa20.04■□□□□ 0.8
SEMA3B-214ENST00000619119 TXNDC2Q86VQ3 553 aa20.04■□□□□ 0.8
SEMA3B-214ENST00000619119 RIPK4P57078 832 aa20.03■□□□□ 0.8
SEMA3B-214ENST00000619119 USP19O94966 1318 aa20.02■□□□□ 0.8
SEMA3B-214ENST00000619119 MCM4P33991 863 aa20.02■□□□□ 0.8
SEMA3B-214ENST00000619119 TRAK2O60296 914 aa20.01■□□□□ 0.79
SEMA3B-214ENST00000619119 GGNBP2Q9H3C7 697 aa20.01■□□□□ 0.79
SEMA3B-214ENST00000619119 ANTXR1Q9H6X2 564 aa20.01■□□□□ 0.79
SEMA3B-214ENST00000619119 METP08581 1390 aa20.01■□□□□ 0.79
SEMA3B-214ENST00000619119 NCBP3Q53F19 620 aaKnown RBP20.01■□□□□ 0.79
SEMA3B-214ENST00000619119 CABP1Q9NZU7 370 aa20.01■□□□□ 0.79
SEMA3B-214ENST00000619119 A0A1W2PP64 1363 aa20■□□□□ 0.79
SEMA3B-214ENST00000619119 ANKRD36BQ8N2N9 1353 aa20■□□□□ 0.79
SEMA3B-214ENST00000619119 SEC24BO95487 1268 aa20■□□□□ 0.79
SEMA3B-214ENST00000619119 ABCF1Q8NE71 845 aaKnown RBP eCLIP20■□□□□ 0.79
SEMA3B-214ENST00000619119 PDE3BQ13370 1112 aa20■□□□□ 0.79
SEMA3B-214ENST00000619119 APAF1O14727 1248 aa19.99■□□□□ 0.79
SEMA3B-214ENST00000619119 MTHFSP49914 203 aa19.99■□□□□ 0.79
SEMA3B-214ENST00000619119 CHMP4BQ9H444 224 aaKnown RBP19.98■□□□□ 0.79
SEMA3B-214ENST00000619119 SMAP1Q8IYB5 467 aaPredicted RBP19.97■□□□□ 0.79
SEMA3B-214ENST00000619119 GTF2E1P29083 439 aaPredicted RBP19.97■□□□□ 0.79
SEMA3B-214ENST00000619119 HDGFP51858 240 aaKnown RBP19.97■□□□□ 0.79
SEMA3B-214ENST00000619119 PUS7Q96PZ0 661 aaKnown RBP19.96■□□□□ 0.79
SEMA3B-214ENST00000619119 NAP1L2Q9ULW6 460 aaPredicted RBP19.96■□□□□ 0.79
SEMA3B-214ENST00000619119 LTKP29376 864 aa19.96■□□□□ 0.79
SEMA3B-214ENST00000619119 NEUROD2Q15784 382 aa19.95■□□□□ 0.78
SEMA3B-214ENST00000619119 SLC26A8Q96RN1 970 aa19.95■□□□□ 0.78
SEMA3B-214ENST00000619119 TERF2IPQ9NYB0 399 aa19.95■□□□□ 0.78
SEMA3B-214ENST00000619119 ATAD2Q6PL18 1390 aa19.95■□□□□ 0.78
SEMA3B-214ENST00000619119 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.95■□□□□ 0.78
SEMA3B-214ENST00000619119 TMEM2Q9UHN6 1383 aa19.95■□□□□ 0.78
SEMA3B-214ENST00000619119 NCKAP5LQ9HCH0 1330 aa19.94■□□□□ 0.78
SEMA3B-214ENST00000619119 MAP7D2Q96T17 732 aa19.94■□□□□ 0.78
SEMA3B-214ENST00000619119 R3HCC1Q9Y3T6 440 aaKnown RBP19.94■□□□□ 0.78
SEMA3B-214ENST00000619119 CANXP27824 592 aaKnown RBP19.93■□□□□ 0.78
SEMA3B-214ENST00000619119 NUTM2FA1L443 756 aa19.93■□□□□ 0.78
SEMA3B-214ENST00000619119 HDGFL2Q7Z4V5 671 aaPredicted RBP19.93■□□□□ 0.78
SEMA3B-214ENST00000619119 RRP7AQ9Y3A4 280 aaKnown RBP19.92■□□□□ 0.78
SEMA3B-214ENST00000619119 TBC1D2Q9BYX2 928 aa19.92■□□□□ 0.78
SEMA3B-214ENST00000619119 INSRP06213 1382 aa19.91■□□□□ 0.78
SEMA3B-214ENST00000619119 ABCC11Q96J66 1382 aa19.91■□□□□ 0.78
SEMA3B-214ENST00000619119 FYB1O15117 783 aa19.91■□□□□ 0.78
SEMA3B-214ENST00000619119 FBLN1P23142 703 aa19.91■□□□□ 0.78
SEMA3B-214ENST00000619119 POLR3AO14802 1390 aaPredicted RBP19.9■□□□□ 0.78
SEMA3B-214ENST00000619119 OFD1O75665 1012 aa19.9■□□□□ 0.78
SEMA3B-214ENST00000619119 NRXN3Q9Y4C0 1643 aa19.89■□□□□ 0.78
SEMA3B-214ENST00000619119 GOLGA2Q08379 1002 aa19.89■□□□□ 0.78
SEMA3B-214ENST00000619119 CFAP53Q96M91 514 aa19.89■□□□□ 0.77
SEMA3B-214ENST00000619119 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.89■□□□□ 0.77
SEMA3B-214ENST00000619119 SPINK5Q9NQ38 1064 aaPredicted RBP19.88■□□□□ 0.77
SEMA3B-214ENST00000619119 WASLO00401 505 aaPredicted RBP19.88■□□□□ 0.77
SEMA3B-214ENST00000619119 U2AF1L5P0DN76 240 aaPredicted RBP19.87■□□□□ 0.77
SEMA3B-214ENST00000619119 U2AF1Q01081 240 aaKnown RBP eCLIP19.87■□□□□ 0.77
SEMA3B-214ENST00000619119 GAS2L3Q86XJ1 694 aa19.87■□□□□ 0.77
SEMA3B-214ENST00000619119 DMRT2Q9Y5R5 561 aa19.87■□□□□ 0.77
SEMA3B-214ENST00000619119 EID1Q9Y6B2 187 aa19.87■□□□□ 0.77
SEMA3B-214ENST00000619119 NINLQ9Y2I6 1382 aa19.87■□□□□ 0.77
SEMA3B-214ENST00000619119 CD163L1Q9NR16 1453 aa19.87■□□□□ 0.77
SEMA3B-214ENST00000619119 MSNP26038 577 aaKnown RBP19.87■□□□□ 0.77
SEMA3B-214ENST00000619119 SETD1AO15047 1707 aaKnown RBP19.86■□□□□ 0.77
SEMA3B-214ENST00000619119 UBR1Q8IWV7 1749 aa19.86■□□□□ 0.77
SEMA3B-214ENST00000619119 U2SURPO15042 1029 aaKnown RBP19.86■□□□□ 0.77
SEMA3B-214ENST00000619119 UQCRHLA0A096LP55 91 aa19.85■□□□□ 0.77
SEMA3B-214ENST00000619119 UQCRHP07919 91 aa19.85■□□□□ 0.77
SEMA3B-214ENST00000619119 DUSP27Q5VZP5 1158 aa19.85■□□□□ 0.77
SEMA3B-214ENST00000619119 ZSCAN30Q86W11 494 aa19.85■□□□□ 0.77
SEMA3B-214ENST00000619119 ZNF521Q96K83 1311 aa19.84■□□□□ 0.77
SEMA3B-214ENST00000619119 NUDT16Q96DE0 195 aaKnown RBP19.84■□□□□ 0.77
SEMA3B-214ENST00000619119 NSD2O96028 1365 aa19.84■□□□□ 0.77
SEMA3B-214ENST00000619119 ROBO2Q9HCK4 1378 aa19.84■□□□□ 0.77
SEMA3B-214ENST00000619119 UPF2Q9HAU5 1272 aaKnown RBP19.83■□□□□ 0.76
SEMA3B-214ENST00000619119 DLC1Q96QB1 1528 aa19.83■□□□□ 0.76
SEMA3B-214ENST00000619119 ADAMTS13Q76LX8 1427 aa19.82■□□□□ 0.76
SEMA3B-214ENST00000619119 DMTNQ08495 405 aa19.82■□□□□ 0.76
SEMA3B-214ENST00000619119 TCP11L2Q8N4U5 519 aa19.82■□□□□ 0.76
SEMA3B-214ENST00000619119 ZRANB1Q9UGI0 708 aa19.81■□□□□ 0.76
SEMA3B-214ENST00000619119 PPIP5K1Q6PFW1 1433 aa19.81■□□□□ 0.76
SEMA3B-214ENST00000619119 SLFN5Q08AF3 891 aa19.81■□□□□ 0.76
SEMA3B-214ENST00000619119 CHMP5Q9NZZ3 219 aa19.81■□□□□ 0.76
SEMA3B-214ENST00000619119 USP32Q8NFA0 1604 aa19.81■□□□□ 0.76
SEMA3B-214ENST00000619119 NLRP1Q9C000 1473 aa19.81■□□□□ 0.76
SEMA3B-214ENST00000619119 C3P01024 1663 aa19.8■□□□□ 0.76
SEMA3B-214ENST00000619119 ANP32BQ92688 251 aaKnown RBP19.8■□□□□ 0.76
SEMA3B-214ENST00000619119 RUNDC1Q96C34 613 aa19.8■□□□□ 0.76
SEMA3B-214ENST00000619119 NME9Q86XW9 330 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms