RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 PUS7Q96PZ0 661 aaKnown RBP21.88■■□□□ 1.09
SRGAP2C-205ENST00000617209 QTRT2Q9H974 415 aaKnown RBP21.88■■□□□ 1.09
SRGAP2C-205ENST00000617209 ABCA3Q99758 1704 aa21.88■■□□□ 1.09
SRGAP2C-205ENST00000617209 RXRBP28702 533 aa21.87■■□□□ 1.09
SRGAP2C-205ENST00000617209 USP21Q9UK80 565 aa21.87■■□□□ 1.09
SRGAP2C-205ENST00000617209 ATAD2Q6PL18 1390 aa21.87■■□□□ 1.09
SRGAP2C-205ENST00000617209 HAP1P54257 671 aaPredicted RBP21.86■■□□□ 1.09
SRGAP2C-205ENST00000617209 ST20-MTHFSA0A0A6YYL1 179 aa21.85■■□□□ 1.09
SRGAP2C-205ENST00000617209 TESK2Q96S53 571 aa21.85■■□□□ 1.09
SRGAP2C-205ENST00000617209 ZNF692Q9BU19 519 aaPredicted RBP21.85■■□□□ 1.09
SRGAP2C-205ENST00000617209 BCL9LQ86UU0 1499 aa21.84■■□□□ 1.09
SRGAP2C-205ENST00000617209 CRYBG1Q9Y4K1 1723 aa21.84■■□□□ 1.09
SRGAP2C-205ENST00000617209 TRPC5Q9UL62 973 aaPredicted RBP21.84■■□□□ 1.09
SRGAP2C-205ENST00000617209 RBM6P78332 1123 aaKnown RBP21.83■■□□□ 1.09
SRGAP2C-205ENST00000617209 SLIT2O94813 1529 aa21.83■■□□□ 1.09
SRGAP2C-205ENST00000617209 CDK12Q9NYV4 1490 aaPredicted RBP21.83■■□□□ 1.08
SRGAP2C-205ENST00000617209 USP6P35125 1406 aa21.82■■□□□ 1.08
SRGAP2C-205ENST00000617209 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.82■■□□□ 1.08
SRGAP2C-205ENST00000617209 ABTB2Q8N961 1025 aa21.81■■□□□ 1.08
SRGAP2C-205ENST00000617209 CPSF1Q10570 1443 aaKnown RBP21.8■■□□□ 1.08
SRGAP2C-205ENST00000617209 SSH2Q76I76 1423 aa21.8■■□□□ 1.08
SRGAP2C-205ENST00000617209 NWD2Q9ULI1 1742 aa21.8■■□□□ 1.08
SRGAP2C-205ENST00000617209 ATRNO75882 1429 aa21.8■■□□□ 1.08
SRGAP2C-205ENST00000617209 AKAP12Q02952 1782 aa21.79■■□□□ 1.08
SRGAP2C-205ENST00000617209 USP47Q96K76 1375 aa21.79■■□□□ 1.08
SRGAP2C-205ENST00000617209 FAM83GA6ND36 823 aa21.79■■□□□ 1.08
SRGAP2C-205ENST00000617209 UNC5CLQ8IV45 518 aa21.79■■□□□ 1.08
SRGAP2C-205ENST00000617209 PLEKHG5O94827 1062 aa21.78■■□□□ 1.08
SRGAP2C-205ENST00000617209 NLRP13Q86W25 1043 aa21.78■■□□□ 1.08
SRGAP2C-205ENST00000617209 COL14A1Q05707 1796 aaKnown RBP21.76■■□□□ 1.07
SRGAP2C-205ENST00000617209 PHRF1Q9P1Y6 1649 aaKnown RBP21.76■■□□□ 1.07
SRGAP2C-205ENST00000617209 USP19O94966 1318 aa21.76■■□□□ 1.07
SRGAP2C-205ENST00000617209 PLCH1Q4KWH8 1693 aa21.75■■□□□ 1.07
SRGAP2C-205ENST00000617209 NUTM2GQ5VZR2 741 aa21.74■■□□□ 1.07
SRGAP2C-205ENST00000617209 GJD4Q96KN9 370 aaPredicted RBP21.74■■□□□ 1.07
SRGAP2C-205ENST00000617209 TTC21BQ7Z4L5 1316 aa21.73■■□□□ 1.07
SRGAP2C-205ENST00000617209 TTC21AQ8NDW8 1320 aa21.73■■□□□ 1.07
SRGAP2C-205ENST00000617209 KTN1Q86UP2 1357 aaKnown RBP21.73■■□□□ 1.07
SRGAP2C-205ENST00000617209 MON2Q7Z3U7 1717 aa21.72■■□□□ 1.07
SRGAP2C-205ENST00000617209 TMF1P82094 1093 aa21.72■■□□□ 1.07
SRGAP2C-205ENST00000617209 VPS72Q15906 364 aa21.72■■□□□ 1.07
SRGAP2C-205ENST00000617209 SLC12A5Q9H2X9 1139 aa21.72■■□□□ 1.07
SRGAP2C-205ENST00000617209 NINLQ9Y2I6 1382 aa21.72■■□□□ 1.07
SRGAP2C-205ENST00000617209 CD163L1Q9NR16 1453 aa21.71■■□□□ 1.07
SRGAP2C-205ENST00000617209 GCP02774 474 aa21.71■■□□□ 1.07
SRGAP2C-205ENST00000617209 NLRP6P59044 892 aa21.71■■□□□ 1.07
SRGAP2C-205ENST00000617209 TMC1Q8TDI8 760 aa21.71■■□□□ 1.07
SRGAP2C-205ENST00000617209 PRDM11Q9NQV5 511 aa21.71■■□□□ 1.07
SRGAP2C-205ENST00000617209 TERF2IPQ9NYB0 399 aa21.71■■□□□ 1.07
SRGAP2C-205ENST00000617209 BTG4Q9NY30 223 aa21.7■■□□□ 1.06
SRGAP2C-205ENST00000617209 CPDO75976 1380 aa21.7■■□□□ 1.06
SRGAP2C-205ENST00000617209 KIAA0232Q92628 1395 aa21.7■■□□□ 1.06
SRGAP2C-205ENST00000617209 NRKQ7Z2Y5 1582 aa21.7■■□□□ 1.06
SRGAP2C-205ENST00000617209 PIK3C2AO00443 1686 aa21.69■■□□□ 1.06
SRGAP2C-205ENST00000617209 CDCA8Q53HL2 280 aa21.69■■□□□ 1.06
SRGAP2C-205ENST00000617209 HDGFL2Q7Z4V5 671 aaPredicted RBP21.69■■□□□ 1.06
SRGAP2C-205ENST00000617209 RGS12O14924 1447 aa21.69■■□□□ 1.06
SRGAP2C-205ENST00000617209 ZC3H6P61129 1189 aaKnown RBP21.68■■□□□ 1.06
SRGAP2C-205ENST00000617209 NRAPQ86VF7 1730 aa21.68■■□□□ 1.06
SRGAP2C-205ENST00000617209 SLIT3O75094 1523 aa21.67■■□□□ 1.06
SRGAP2C-205ENST00000617209 GLI3P10071 1580 aa21.66■■□□□ 1.06
SRGAP2C-205ENST00000617209 ONECUT3O60422 494 aaPredicted RBP21.66■■□□□ 1.06
SRGAP2C-205ENST00000617209 EDC4Q6P2E9 1401 aaKnown RBP21.64■■□□□ 1.06
SRGAP2C-205ENST00000617209 A0A1W2PP64 1363 aa21.64■■□□□ 1.06
SRGAP2C-205ENST00000617209 USP31Q70CQ4 1352 aa21.64■■□□□ 1.06
SRGAP2C-205ENST00000617209 KCNH5Q8NCM2 988 aa21.64■■□□□ 1.05
SRGAP2C-205ENST00000617209 EIF4G2P78344 907 aaKnown RBP eCLIP21.63■■□□□ 1.05
SRGAP2C-205ENST00000617209 CHRNA2Q15822 529 aa21.63■■□□□ 1.05
SRGAP2C-205ENST00000617209 USP54Q70EL1 1684 aa21.62■■□□□ 1.05
SRGAP2C-205ENST00000617209 LMO7Q8WWI1 1683 aa21.61■■□□□ 1.05
SRGAP2C-205ENST00000617209 CAMTA1Q9Y6Y1 1673 aa21.6■■□□□ 1.05
SRGAP2C-205ENST00000617209 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.6■■□□□ 1.05
SRGAP2C-205ENST00000617209 CCDC9Q9Y3X0 531 aaKnown RBP21.6■■□□□ 1.05
SRGAP2C-205ENST00000617209 ANKRD36BQ8N2N9 1353 aa21.6■■□□□ 1.05
SRGAP2C-205ENST00000617209 SPATA31A5Q5VU36 1347 aa21.59■■□□□ 1.05
SRGAP2C-205ENST00000617209 SPATA31A7Q8IWB4 1347 aa21.59■■□□□ 1.05
SRGAP2C-205ENST00000617209 AATKQ6ZMQ8 1374 aa21.59■■□□□ 1.05
SRGAP2C-205ENST00000617209 ARHGEF25Q86VW2 580 aa21.58■■□□□ 1.05
SRGAP2C-205ENST00000617209 UPF1Q92900 1129 aaKnown RBP eCLIP21.58■■□□□ 1.05
SRGAP2C-205ENST00000617209 NME9Q86XW9 330 aa21.57■■□□□ 1.04
SRGAP2C-205ENST00000617209 COL18A1P39060 1754 aa21.56■■□□□ 1.04
SRGAP2C-205ENST00000617209 HSPA5P11021 654 aaKnown RBP21.56■■□□□ 1.04
SRGAP2C-205ENST00000617209 EVA1CP58658 441 aa21.56■■□□□ 1.04
SRGAP2C-205ENST00000617209 SEPT12Q8IYM1 358 aa21.56■■□□□ 1.04
SRGAP2C-205ENST00000617209 ZRANB1Q9UGI0 708 aa21.55■■□□□ 1.04
SRGAP2C-205ENST00000617209 BRWD3Q6RI45 1802 aa21.55■■□□□ 1.04
SRGAP2C-205ENST00000617209 NFAT5O94916 1531 aa21.55■■□□□ 1.04
SRGAP2C-205ENST00000617209 SPATA31A1Q5TZJ5 1347 aa21.55■■□□□ 1.04
SRGAP2C-205ENST00000617209 STRN4Q9NRL3 753 aa21.54■■□□□ 1.04
SRGAP2C-205ENST00000617209 COL5A2P05997 1499 aaPredicted RBP21.52■■□□□ 1.04
SRGAP2C-205ENST00000617209 FAM98CQ17RN3 349 aaKnown RBP21.52■■□□□ 1.04
SRGAP2C-205ENST00000617209 MYOM1P52179 1685 aa21.52■■□□□ 1.04
SRGAP2C-205ENST00000617209 OVOS2A0A0J9YW53 1432 aa21.52■■□□□ 1.04
SRGAP2C-205ENST00000617209 OVOS2Q6IE36 1432 aa21.52■■□□□ 1.04
SRGAP2C-205ENST00000617209 ABCC6O95255 1503 aa21.5■■□□□ 1.03
SRGAP2C-205ENST00000617209 LARP1Q6PKG0 1096 aaKnown RBP21.5■■□□□ 1.03
SRGAP2C-205ENST00000617209 BARGINQ6ZT62 677 aa21.5■■□□□ 1.03
SRGAP2C-205ENST00000617209 AXIN2Q9Y2T1 843 aa21.5■■□□□ 1.03
SRGAP2C-205ENST00000617209 THRAP3Q9Y2W1 955 aaKnown RBP21.49■■□□□ 1.03
SRGAP2C-205ENST00000617209 RGPD5Q99666 1765 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms