RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 IFT57Q9NWB7 429 aa21.25■□□□□ 0.99
ATXN2-227ENST00000616825 MBD3O95983 291 aa21.24■□□□□ 0.99
ATXN2-227ENST00000616825 CT47A1Q5JQC4 288 aaPredicted RBP21.24■□□□□ 0.99
ATXN2-227ENST00000616825 PNISRQ8TF01 805 aaKnown RBP21.24■□□□□ 0.99
ATXN2-227ENST00000616825 ARHGAP5Q13017 1502 aa21.24■□□□□ 0.99
ATXN2-227ENST00000616825 NFKBIBQ15653 356 aa21.24■□□□□ 0.99
ATXN2-227ENST00000616825 GRIN2BQ13224 1484 aa21.24■□□□□ 0.99
ATXN2-227ENST00000616825 ZNF530Q6P9A1 599 aaPredicted RBP21.23■□□□□ 0.99
ATXN2-227ENST00000616825 FAM43AQ8N2R8 423 aa21.23■□□□□ 0.99
ATXN2-227ENST00000616825 NAP1L1P55209 391 aaKnown RBP21.23■□□□□ 0.99
ATXN2-227ENST00000616825 RABEP1Q15276 862 aa21.23■□□□□ 0.99
ATXN2-227ENST00000616825 MNS1Q8NEH6 495 aa21.23■□□□□ 0.99
ATXN2-227ENST00000616825 KINO60870 393 aaKnown RBP21.22■□□□□ 0.99
ATXN2-227ENST00000616825 TSR2Q969E8 191 aaKnown RBP21.22■□□□□ 0.99
ATXN2-227ENST00000616825 CDK19Q9BWU1 502 aa21.22■□□□□ 0.99
ATXN2-227ENST00000616825 NCAPD3P42695 1498 aa21.22■□□□□ 0.99
ATXN2-227ENST00000616825 SCAPERQ9BY12 1400 aa21.22■□□□□ 0.99
ATXN2-227ENST00000616825 KIF21BO75037 1637 aa21.22■□□□□ 0.99
ATXN2-227ENST00000616825 SRCIN1Q9C0H9 1055 aa21.22■□□□□ 0.99
ATXN2-227ENST00000616825 CCT4P50991 539 aaKnown RBP21.21■□□□□ 0.99
ATXN2-227ENST00000616825 SLC3A2P08195 630 aaKnown RBP21.21■□□□□ 0.99
ATXN2-227ENST00000616825 CT47B1P0C2W7 299 aaPredicted RBP21.21■□□□□ 0.99
ATXN2-227ENST00000616825 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.21■□□□□ 0.99
ATXN2-227ENST00000616825 CNNM1Q9NRU3 951 aa21.21■□□□□ 0.99
ATXN2-227ENST00000616825 MRE11P49959 708 aa21.21■□□□□ 0.99
ATXN2-227ENST00000616825 CCDC158Q5M9N0 1113 aa21.21■□□□□ 0.99
ATXN2-227ENST00000616825 CNKSR2Q8WXI2 1034 aa21.21■□□□□ 0.99
ATXN2-227ENST00000616825 RNF214Q8ND24 703 aa21.2■□□□□ 0.98
ATXN2-227ENST00000616825 SMG6Q86US8 1419 aaKnown RBP21.2■□□□□ 0.98
ATXN2-227ENST00000616825 GNL3LQ9NVN8 582 aaKnown RBP21.2■□□□□ 0.98
ATXN2-227ENST00000616825 PRG4Q92954 1404 aaPredicted RBP21.2■□□□□ 0.98
ATXN2-227ENST00000616825 SETQ01105 290 aaPredicted RBP21.19■□□□□ 0.98
ATXN2-227ENST00000616825 ODF2Q5BJF6 829 aa21.19■□□□□ 0.98
ATXN2-227ENST00000616825 C1orf115Q9H7X2 142 aa21.19■□□□□ 0.98
ATXN2-227ENST00000616825 FAM13BQ9NYF5 915 aa21.19■□□□□ 0.98
ATXN2-227ENST00000616825 NOB1Q9ULX3 412 aaKnown RBP21.19■□□□□ 0.98
ATXN2-227ENST00000616825 EPS15P42566 896 aa21.18■□□□□ 0.98
ATXN2-227ENST00000616825 TOM1L2Q6ZVM7 507 aa21.18■□□□□ 0.98
ATXN2-227ENST00000616825 WDR63Q8IWG1 891 aa21.18■□□□□ 0.98
ATXN2-227ENST00000616825 NASPP49321 788 aaPredicted RBP21.18■□□□□ 0.98
ATXN2-227ENST00000616825 RRP12Q5JTH9 1297 aaKnown RBP21.18■□□□□ 0.98
ATXN2-227ENST00000616825 ARGLU1Q9NWB6 273 aaPredicted RBP21.18■□□□□ 0.98
ATXN2-227ENST00000616825 CABP4P57796 275 aa21.18■□□□□ 0.98
ATXN2-227ENST00000616825 TEX35Q5T0J7 233 aa21.18■□□□□ 0.98
ATXN2-227ENST00000616825 SLC26A8Q96RN1 970 aa21.17■□□□□ 0.98
ATXN2-227ENST00000616825 CDR1P51861 262 aa21.17■□□□□ 0.98
ATXN2-227ENST00000616825 NBPF8Q3BBV2 869 aa21.17■□□□□ 0.98
ATXN2-227ENST00000616825 ATF7IPQ6VMQ6 1270 aa21.17■□□□□ 0.98
ATXN2-227ENST00000616825 DDX54Q8TDD1 881 aaKnown RBP21.16■□□□□ 0.98
ATXN2-227ENST00000616825 CFTRP13569 1480 aa21.16■□□□□ 0.98
ATXN2-227ENST00000616825 TRAK2O60296 914 aa21.16■□□□□ 0.98
ATXN2-227ENST00000616825 BCAR3O75815 825 aa21.16■□□□□ 0.98
ATXN2-227ENST00000616825 TRIM5Q9C035 493 aa21.16■□□□□ 0.98
ATXN2-227ENST00000616825 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.16■□□□□ 0.982e-6■■■□□ 15.9
ATXN2-227ENST00000616825 PRDM11Q9NQV5 511 aa21.16■□□□□ 0.98
ATXN2-227ENST00000616825 TXLNAP40222 546 aa21.16■□□□□ 0.98
ATXN2-227ENST00000616825 RUFY1Q96T51 708 aa21.16■□□□□ 0.98
ATXN2-227ENST00000616825 PDILTQ8N807 584 aa21.16■□□□□ 0.98
ATXN2-227ENST00000616825 KIAA1107Q9UPP5 1409 aa21.15■□□□□ 0.98
ATXN2-227ENST00000616825 SPG7Q9UQ90 795 aa21.15■□□□□ 0.98
ATXN2-227ENST00000616825 CCDC173Q0VFZ6 552 aa21.15■□□□□ 0.98
ATXN2-227ENST00000616825 JMYQ8N9B5 988 aa21.15■□□□□ 0.98
ATXN2-227ENST00000616825 LRRCC1Q9C099 1032 aa21.15■□□□□ 0.98
ATXN2-227ENST00000616825 LETM1O95202 739 aaPredicted RBP21.15■□□□□ 0.98
ATXN2-227ENST00000616825 STK38Q15208 465 aa21.15■□□□□ 0.98
ATXN2-227ENST00000616825 NACAP1Q9BZK3 213 aa21.15■□□□□ 0.98
ATXN2-227ENST00000616825 PRDM2Q13029 1718 aa21.14■□□□□ 0.98
ATXN2-227ENST00000616825 ACBD3Q9H3P7 528 aa21.14■□□□□ 0.98
ATXN2-227ENST00000616825 CAVIN1Q6NZI2 390 aaKnown RBP21.14■□□□□ 0.97
ATXN2-227ENST00000616825 FMNL2Q96PY5 1086 aa21.14■□□□□ 0.97
ATXN2-227ENST00000616825 FIBPO43427 364 aa21.14■□□□□ 0.97
ATXN2-227ENST00000616825 ANKLE2Q86XL3 938 aa21.14■□□□□ 0.97
ATXN2-227ENST00000616825 PHF23Q9BUL5 403 aaPredicted RBP21.14■□□□□ 0.97
ATXN2-227ENST00000616825 DNAJC5BQ9UF47 199 aa21.14■□□□□ 0.97
ATXN2-227ENST00000616825 CYP46A1Q9Y6A2 500 aa21.14■□□□□ 0.97
ATXN2-227ENST00000616825 C9orf84Q5VXU9 1444 aa21.14■□□□□ 0.97
ATXN2-227ENST00000616825 KDM4AO75164 1064 aa21.14■□□□□ 0.97
ATXN2-227ENST00000616825 ZNF396Q96N95 335 aaPredicted RBP21.14■□□□□ 0.97
ATXN2-227ENST00000616825 HSP90B2PQ58FF3 399 aa21.13■□□□□ 0.97
ATXN2-227ENST00000616825 TTC39AQ5SRH9 613 aa21.13■□□□□ 0.97
ATXN2-227ENST00000616825 ZNF771Q7L3S4 317 aaPredicted RBP21.13■□□□□ 0.97
ATXN2-227ENST00000616825 ZNF428Q96B54 188 aa21.13■□□□□ 0.97
ATXN2-227ENST00000616825 ZFYVE27Q5T4F4 411 aa21.12■□□□□ 0.97
ATXN2-227ENST00000616825 MPHOSPH8Q99549 860 aa21.12■□□□□ 0.97
ATXN2-227ENST00000616825 PLEKHH2Q8IVE3 1493 aa21.12■□□□□ 0.97
ATXN2-227ENST00000616825 RPGRIP1LQ68CZ1 1315 aa21.12■□□□□ 0.97
ATXN2-227ENST00000616825 PRPF40AO75400 957 aaKnown RBP21.12■□□□□ 0.97
ATXN2-227ENST00000616825 FILIP1LQ4L180 1135 aa21.12■□□□□ 0.97
ATXN2-227ENST00000616825 RTEL1-TNFRSF6BF6WH68 1400 aa21.12■□□□□ 0.97
ATXN2-227ENST00000616825 CCDC57Q2TAC2 916 aa21.11■□□□□ 0.97
ATXN2-227ENST00000616825 TRIM22Q8IYM9 498 aa21.11■□□□□ 0.97
ATXN2-227ENST00000616825 CDK5RAP3Q96JB5 506 aa21.11■□□□□ 0.97
ATXN2-227ENST00000616825 SIL1Q9H173 461 aa21.11■□□□□ 0.97
ATXN2-227ENST00000616825 ANKRD1Q15327 319 aa21.11■□□□□ 0.97
ATXN2-227ENST00000616825 CEP126Q9P2H0 1117 aa21.11■□□□□ 0.97
ATXN2-227ENST00000616825 CCDC39Q9UFE4 941 aa21.11■□□□□ 0.97
ATXN2-227ENST00000616825 RAPGEF3O95398 923 aa21.11■□□□□ 0.97
ATXN2-227ENST00000616825 CCDC61Q9Y6R9 512 aa21.11■□□□□ 0.97
ATXN2-227ENST00000616825 ANKRD30BQ9BXX2 1392 aa21.11■□□□□ 0.97
ATXN2-227ENST00000616825 ATAD2Q6PL18 1390 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms