RNA–Protein interactions for RNA: ENST00000614778.4

PDCD6-212, Transcript of programmed cell death 6, humanhuman

TSL 2 BASIC

Gene PDCD6, Length 1,050 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-212ENST00000614778 CABP1Q9NZU7 370 aa22.27■■□□□ 1.16
PDCD6-212ENST00000614778 BCL9LQ86UU0 1499 aa22.27■■□□□ 1.16
PDCD6-212ENST00000614778 RXRBP28702 533 aa22.26■■□□□ 1.15
PDCD6-212ENST00000614778 HAP1P54257 671 aaPredicted RBP22.25■■□□□ 1.15
PDCD6-212ENST00000614778 CCER1Q8TC90 406 aaPredicted RBP22.25■■□□□ 1.15
PDCD6-212ENST00000614778 SLIT2O94813 1529 aa22.23■■□□□ 1.15
PDCD6-212ENST00000614778 ATRNO75882 1429 aa22.23■■□□□ 1.15
PDCD6-212ENST00000614778 NUTM2GQ5VZR2 741 aa22.22■■□□□ 1.15
PDCD6-212ENST00000614778 TIMELESSQ9UNS1 1208 aa22.22■■□□□ 1.15
PDCD6-212ENST00000614778 RBM6P78332 1123 aaKnown RBP22.21■■□□□ 1.15
PDCD6-212ENST00000614778 PLCH1Q4KWH8 1693 aa22.2■■□□□ 1.15
PDCD6-212ENST00000614778 ST20-MTHFSA0A0A6YYL1 179 aa22.2■■□□□ 1.14
PDCD6-212ENST00000614778 TESK2Q96S53 571 aa22.2■■□□□ 1.14
PDCD6-212ENST00000614778 TRPC5Q9UL62 973 aaPredicted RBP22.2■■□□□ 1.14
PDCD6-212ENST00000614778 USP6P35125 1406 aa22.2■■□□□ 1.14
PDCD6-212ENST00000614778 PHRF1Q9P1Y6 1649 aaKnown RBP22.2■■□□□ 1.14
PDCD6-212ENST00000614778 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.2■■□□□ 1.14
PDCD6-212ENST00000614778 FAM83GA6ND36 823 aa22.19■■□□□ 1.14
PDCD6-212ENST00000614778 ATAD2Q6PL18 1390 aa22.19■■□□□ 1.14
PDCD6-212ENST00000614778 CDK12Q9NYV4 1490 aaPredicted RBP22.19■■□□□ 1.14
PDCD6-212ENST00000614778 AKAP12Q02952 1782 aa22.18■■□□□ 1.14
PDCD6-212ENST00000614778 RGS12O14924 1447 aa22.18■■□□□ 1.14
PDCD6-212ENST00000614778 SSH2Q76I76 1423 aa22.17■■□□□ 1.14
PDCD6-212ENST00000614778 UNC5CLQ8IV45 518 aa22.17■■□□□ 1.14
PDCD6-212ENST00000614778 ABTB2Q8N961 1025 aa22.17■■□□□ 1.14
PDCD6-212ENST00000614778 USP47Q96K76 1375 aa22.16■■□□□ 1.14
PDCD6-212ENST00000614778 NWD2Q9ULI1 1742 aa22.16■■□□□ 1.14
PDCD6-212ENST00000614778 CPSF1Q10570 1443 aaKnown RBP22.14■■□□□ 1.14
PDCD6-212ENST00000614778 COL14A1Q05707 1796 aaKnown RBP22.14■■□□□ 1.13
PDCD6-212ENST00000614778 NRAPQ86VF7 1730 aa22.14■■□□□ 1.13
PDCD6-212ENST00000614778 BRD4O60885 1362 aaPredicted RBP22.13■■□□□ 1.13
PDCD6-212ENST00000614778 PIK3C2AO00443 1686 aa22.13■■□□□ 1.13
PDCD6-212ENST00000614778 GLI3P10071 1580 aa22.12■■□□□ 1.13
PDCD6-212ENST00000614778 NRKQ7Z2Y5 1582 aa22.12■■□□□ 1.13
PDCD6-212ENST00000614778 USP19O94966 1318 aa22.12■■□□□ 1.13
PDCD6-212ENST00000614778 CD163L1Q9NR16 1453 aa22.12■■□□□ 1.13
PDCD6-212ENST00000614778 GJD4Q96KN9 370 aaPredicted RBP22.12■■□□□ 1.13
PDCD6-212ENST00000614778 KIAA0232Q92628 1395 aa22.12■■□□□ 1.13
PDCD6-212ENST00000614778 ZC3H6P61129 1189 aaKnown RBP22.11■■□□□ 1.13
PDCD6-212ENST00000614778 SLC12A5Q9H2X9 1139 aa22.11■■□□□ 1.13
PDCD6-212ENST00000614778 MON2Q7Z3U7 1717 aa22.11■■□□□ 1.13
PDCD6-212ENST00000614778 ZNF692Q9BU19 519 aaPredicted RBP22.1■■□□□ 1.13
PDCD6-212ENST00000614778 PRDM11Q9NQV5 511 aa22.1■■□□□ 1.13
PDCD6-212ENST00000614778 BTG4Q9NY30 223 aa22.1■■□□□ 1.13
PDCD6-212ENST00000614778 TTC21BQ7Z4L5 1316 aa22.09■■□□□ 1.13
PDCD6-212ENST00000614778 CHRNA2Q15822 529 aa22.09■■□□□ 1.13
PDCD6-212ENST00000614778 NLRP13Q86W25 1043 aa22.09■■□□□ 1.13
PDCD6-212ENST00000614778 TMC1Q8TDI8 760 aa22.09■■□□□ 1.13
PDCD6-212ENST00000614778 KTN1Q86UP2 1357 aaKnown RBP22.09■■□□□ 1.13
PDCD6-212ENST00000614778 VPS72Q15906 364 aa22.08■■□□□ 1.13
PDCD6-212ENST00000614778 PUS7Q96PZ0 661 aaKnown RBP22.08■■□□□ 1.13
PDCD6-212ENST00000614778 NLRP6P59044 892 aa22.07■■□□□ 1.12
PDCD6-212ENST00000614778 GCP02774 474 aa22.06■■□□□ 1.12
PDCD6-212ENST00000614778 SLIT3O75094 1523 aa22.06■■□□□ 1.12
PDCD6-212ENST00000614778 A0A1W2PP64 1363 aa22.03■■□□□ 1.12
PDCD6-212ENST00000614778 CPDO75976 1380 aa22.03■■□□□ 1.12
PDCD6-212ENST00000614778 ZRANB1Q9UGI0 708 aa22.03■■□□□ 1.12
PDCD6-212ENST00000614778 CCDC9Q9Y3X0 531 aaKnown RBP22.03■■□□□ 1.12
PDCD6-212ENST00000614778 TTC21AQ8NDW8 1320 aa22.03■■□□□ 1.12
PDCD6-212ENST00000614778 LMO7Q8WWI1 1683 aa22.02■■□□□ 1.12
PDCD6-212ENST00000614778 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.02■■□□□ 1.12
PDCD6-212ENST00000614778 UPF1Q92900 1129 aaKnown RBP eCLIP22.02■■□□□ 1.12
PDCD6-212ENST00000614778 EP400Q96L91 3159 aa22.02■■□□□ 1.12
PDCD6-212ENST00000614778 CAMTA1Q9Y6Y1 1673 aa22.01■■□□□ 1.11
PDCD6-212ENST00000614778 SLC24A1O60721 1099 aa22.01■■□□□ 1.11
PDCD6-212ENST00000614778 TMF1P82094 1093 aa22.01■■□□□ 1.11
PDCD6-212ENST00000614778 BRWD3Q6RI45 1802 aa22.01■■□□□ 1.11
PDCD6-212ENST00000614778 HDGFL2Q7Z4V5 671 aaPredicted RBP22■■□□□ 1.11
PDCD6-212ENST00000614778 NME9Q86XW9 330 aa21.99■■□□□ 1.11
PDCD6-212ENST00000614778 TERF2IPQ9NYB0 399 aa21.99■■□□□ 1.11
PDCD6-212ENST00000614778 EDC4Q6P2E9 1401 aaKnown RBP21.98■■□□□ 1.11
PDCD6-212ENST00000614778 STRN4Q9NRL3 753 aa21.98■■□□□ 1.11
PDCD6-212ENST00000614778 SPATA31A5Q5VU36 1347 aa21.98■■□□□ 1.11
PDCD6-212ENST00000614778 SPATA31A7Q8IWB4 1347 aa21.98■■□□□ 1.11
PDCD6-212ENST00000614778 NINLQ9Y2I6 1382 aa21.98■■□□□ 1.11
PDCD6-212ENST00000614778 ONECUT3O60422 494 aaPredicted RBP21.97■■□□□ 1.11
PDCD6-212ENST00000614778 USP54Q70EL1 1684 aa21.97■■□□□ 1.11
PDCD6-212ENST00000614778 COL18A1P39060 1754 aa21.97■■□□□ 1.11
PDCD6-212ENST00000614778 NFAT5O94916 1531 aa21.96■■□□□ 1.11
PDCD6-212ENST00000614778 ZBTB7CA1YPR0 619 aa21.96■■□□□ 1.11
PDCD6-212ENST00000614778 SOX12O15370 315 aa21.96■■□□□ 1.11
PDCD6-212ENST00000614778 SEPT12Q8IYM1 358 aa21.96■■□□□ 1.11
PDCD6-212ENST00000614778 USP31Q70CQ4 1352 aa21.96■■□□□ 1.11
PDCD6-212ENST00000614778 FAM98CQ17RN3 349 aaKnown RBP21.95■■□□□ 1.1
PDCD6-212ENST00000614778 MYOM1P52179 1685 aa21.94■■□□□ 1.1
PDCD6-212ENST00000614778 COL5A2P05997 1499 aaPredicted RBP21.93■■□□□ 1.1
PDCD6-212ENST00000614778 HSPA5P11021 654 aaKnown RBP21.93■■□□□ 1.1
PDCD6-212ENST00000614778 SPATA31A1Q5TZJ5 1347 aa21.93■■□□□ 1.1
PDCD6-212ENST00000614778 LARP1Q6PKG0 1096 aaKnown RBP21.93■■□□□ 1.1
PDCD6-212ENST00000614778 AATKQ6ZMQ8 1374 aa21.93■■□□□ 1.1
PDCD6-212ENST00000614778 ARHGEF25Q86VW2 580 aa21.93■■□□□ 1.1
PDCD6-212ENST00000614778 ANKRD36BQ8N2N9 1353 aa21.93■■□□□ 1.1
PDCD6-212ENST00000614778 EVA1CP58658 441 aa21.92■■□□□ 1.1
PDCD6-212ENST00000614778 KCNH5Q8NCM2 988 aa21.92■■□□□ 1.1
PDCD6-212ENST00000614778 RGPD5Q99666 1765 aa21.92■■□□□ 1.1
PDCD6-212ENST00000614778 EIF4G2P78344 907 aaKnown RBP eCLIP21.91■■□□□ 1.12e-7■■■■■ 43.7
PDCD6-212ENST00000614778 AXIN2Q9Y2T1 843 aa21.91■■□□□ 1.1
PDCD6-212ENST00000614778 THSD7AQ9UPZ6 1657 aa21.91■■□□□ 1.1
PDCD6-212ENST00000614778 OVOS2A0A0J9YW53 1432 aa21.9■■□□□ 1.1
PDCD6-212ENST00000614778 OVOS2Q6IE36 1432 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms