RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 TSHZ2Q9NRE2 1034 aa4.51□□□□□ -1.69
LIG4-205ENST00000614526 LAS1LQ9Y4W2 734 aaKnown RBP4.51□□□□□ -1.69
LIG4-205ENST00000614526 NRXN3Q9Y4C0 1643 aa4.51□□□□□ -1.69
LIG4-205ENST00000614526 UBR1Q8IWV7 1749 aa4.51□□□□□ -1.69
LIG4-205ENST00000614526 SLFN5Q08AF3 891 aa4.5□□□□□ -1.69
LIG4-205ENST00000614526 LMOD2Q6P5Q4 547 aa4.5□□□□□ -1.69
LIG4-205ENST00000614526 FER1L4A9Z1Z3 1794 aa4.5□□□□□ -1.69
LIG4-205ENST00000614526 FRAT1Q92837 279 aaPredicted RBP4.5□□□□□ -1.69
LIG4-205ENST00000614526 TSR2Q969E8 191 aaKnown RBP4.5□□□□□ -1.69
LIG4-205ENST00000614526 THUMPD2Q9BTF0 503 aaKnown RBP4.5□□□□□ -1.69
LIG4-205ENST00000614526 MAPK8IP3Q9UPT6 1336 aa4.5□□□□□ -1.69
LIG4-205ENST00000614526 SKAP1Q86WV1 359 aa4.5□□□□□ -1.69
LIG4-205ENST00000614526 CRBNQ96SW2 442 aa4.5□□□□□ -1.69
LIG4-205ENST00000614526 RIMS1Q86UR5 1692 aaKnown RBP4.5□□□□□ -1.69
LIG4-205ENST00000614526 PRKAR2BP31323 418 aa4.49□□□□□ -1.69
LIG4-205ENST00000614526 RIPK4P57078 832 aa4.49□□□□□ -1.69
LIG4-205ENST00000614526 NINLQ9Y2I6 1382 aa4.49□□□□□ -1.69
LIG4-205ENST00000614526 TTC21BQ7Z4L5 1316 aa4.49□□□□□ -1.69
LIG4-205ENST00000614526 ZNF521Q96K83 1311 aa4.49□□□□□ -1.69
LIG4-205ENST00000614526 NLRP6P59044 892 aa4.49□□□□□ -1.69
LIG4-205ENST00000614526 ESCO1Q5FWF5 840 aa4.49□□□□□ -1.69
LIG4-205ENST00000614526 LTV1Q96GA3 475 aaPredicted RBP4.49□□□□□ -1.69
LIG4-205ENST00000614526 PHACTR3Q96KR7 559 aa4.49□□□□□ -1.69
LIG4-205ENST00000614526 ZNF692Q9BU19 519 aaPredicted RBP4.49□□□□□ -1.69
LIG4-205ENST00000614526 HSP90AB2PQ58FF8 381 aa4.49□□□□□ -1.69
LIG4-205ENST00000614526 SIRT1Q96EB6 747 aa4.49□□□□□ -1.69
LIG4-205ENST00000614526 FAM135BQ49AJ0 1406 aa4.49□□□□□ -1.69
LIG4-205ENST00000614526 NSD2O96028 1365 aa4.49□□□□□ -1.69
LIG4-205ENST00000614526 E9PSI1 815 aa4.48□□□□□ -1.69
LIG4-205ENST00000614526 CANXP27824 592 aaKnown RBP4.48□□□□□ -1.69
LIG4-205ENST00000614526 TMPOP42166 694 aaKnown RBP4.48□□□□□ -1.69
LIG4-205ENST00000614526 AEBP1Q8IUX7 1158 aa4.48□□□□□ -1.69
LIG4-205ENST00000614526 CLUAP1Q96AJ1 413 aa4.48□□□□□ -1.69
LIG4-205ENST00000614526 CPS1P31327 1500 aa4.48□□□□□ -1.69
LIG4-205ENST00000614526 ELL2O00472 640 aaPredicted RBP4.48□□□□□ -1.69
LIG4-205ENST00000614526 TCERG1O14776 1098 aaKnown RBP4.48□□□□□ -1.69
LIG4-205ENST00000614526 FOXO3O43524 673 aa4.48□□□□□ -1.69
LIG4-205ENST00000614526 DCTN1Q14203 1278 aa4.48□□□□□ -1.69
LIG4-205ENST00000614526 PROSER2Q86WR7 435 aaPredicted RBP4.48□□□□□ -1.69
LIG4-205ENST00000614526 ABTB2Q8N961 1025 aa4.48□□□□□ -1.69
LIG4-205ENST00000614526 RNF123Q5XPI4 1314 aa4.48□□□□□ -1.69
LIG4-205ENST00000614526 SETD1AO15047 1707 aaKnown RBP4.48□□□□□ -1.69
LIG4-205ENST00000614526 DLC1Q96QB1 1528 aa4.48□□□□□ -1.69
LIG4-205ENST00000614526 NEFMP07197 916 aa4.48□□□□□ -1.69
LIG4-205ENST00000614526 ORAI2Q96SN7 254 aa4.48□□□□□ -1.69
LIG4-205ENST00000614526 TNNQ9UQP3 1299 aa4.48□□□□□ -1.69
LIG4-205ENST00000614526 CPSF1Q10570 1443 aaKnown RBP4.48□□□□□ -1.69
LIG4-205ENST00000614526 PLEKHG3A1L390 1219 aa4.47□□□□□ -1.69
LIG4-205ENST00000614526 FAM83GA6ND36 823 aa4.47□□□□□ -1.69
LIG4-205ENST00000614526 TECPR2O15040 1411 aa4.47□□□□□ -1.69
LIG4-205ENST00000614526 SULT6B1Q6IMI4 303 aa4.47□□□□□ -1.69
LIG4-205ENST00000614526 DDX17Q92841 729 aaKnown RBP4.47□□□□□ -1.69
LIG4-205ENST00000614526 PLEKHF1Q96S99 279 aa4.47□□□□□ -1.69
LIG4-205ENST00000614526 ATP7BP35670 1465 aa4.47□□□□□ -1.69
LIG4-205ENST00000614526 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.47□□□□□ -1.69
LIG4-205ENST00000614526 EDC4Q6P2E9 1401 aaKnown RBP4.47□□□□□ -1.69
LIG4-205ENST00000614526 AMPHP49418 695 aa4.47□□□□□ -1.69
LIG4-205ENST00000614526 PSME1Q06323 249 aa4.47□□□□□ -1.69
LIG4-205ENST00000614526 TRIM35Q9UPQ4 493 aa4.47□□□□□ -1.69
LIG4-205ENST00000614526 ARHGAP23Q9P227 1491 aa4.47□□□□□ -1.69
LIG4-205ENST00000614526 IL13P35225 146 aa4.47□□□□□ -1.69
LIG4-205ENST00000614526 EXOSC9Q06265 439 aaKnown RBP4.47□□□□□ -1.69
LIG4-205ENST00000614526 PANK1Q8TE04 598 aa4.47□□□□□ -1.69
LIG4-205ENST00000614526 PHF8Q9UPP1 1060 aa4.47□□□□□ -1.69
LIG4-205ENST00000614526 MED14O60244 1454 aa4.47□□□□□ -1.69
LIG4-205ENST00000614526 CEP170BQ9Y4F5 1589 aaPredicted RBP4.47□□□□□ -1.69
LIG4-205ENST00000614526 NKTRP30414 1462 aaKnown RBP4.47□□□□□ -1.69
LIG4-205ENST00000614526 EIF4A2Q14240 407 aaKnown RBP4.46□□□□□ -1.69
LIG4-205ENST00000614526 COG6Q9Y2V7 657 aa4.46□□□□□ -1.69
LIG4-205ENST00000614526 SLIT1O75093 1534 aa4.46□□□□□ -1.69
LIG4-205ENST00000614526 ERICH6BQ5W0A0 696 aa4.46□□□□□ -1.7
LIG4-205ENST00000614526 TRMT2AQ8IZ69 625 aaKnown RBP4.46□□□□□ -1.7
LIG4-205ENST00000614526 RSPH6AQ9H0K4 717 aa4.46□□□□□ -1.7
LIG4-205ENST00000614526 FCHSD2O94868 740 aa4.46□□□□□ -1.7
LIG4-205ENST00000614526 USHBP1Q8N6Y0 703 aa4.46□□□□□ -1.7
LIG4-205ENST00000614526 MAP3K19Q56UN5 1328 aa4.46□□□□□ -1.7
LIG4-205ENST00000614526 RBM19Q9Y4C8 960 aaKnown RBP4.46□□□□□ -1.7
LIG4-205ENST00000614526 INSRP06213 1382 aa4.45□□□□□ -1.7
LIG4-205ENST00000614526 USP6P35125 1406 aa4.45□□□□□ -1.7
LIG4-205ENST00000614526 MCM10Q7L590 875 aa4.45□□□□□ -1.7
LIG4-205ENST00000614526 WDR63Q8IWG1 891 aa4.45□□□□□ -1.7
LIG4-205ENST00000614526 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.45□□□□□ -1.7
LIG4-205ENST00000614526 MIS18AQ9NYP9 233 aa4.45□□□□□ -1.7
LIG4-205ENST00000614526 RARSP54136 660 aaKnown RBP4.45□□□□□ -1.7
LIG4-205ENST00000614526 BCL11AQ9H165 835 aa4.45□□□□□ -1.7
LIG4-205ENST00000614526 MYH16Q9H6N6 1097 aa4.45□□□□□ -1.7
LIG4-205ENST00000614526 FANCIQ9NVI1 1328 aa4.45□□□□□ -1.7
LIG4-205ENST00000614526 NPHP4O75161 1426 aaPredicted RBP4.45□□□□□ -1.7
LIG4-205ENST00000614526 SHPRHQ149N8 1683 aa4.45□□□□□ -1.7
LIG4-205ENST00000614526 PNPLA6Q8IY17 1366 aa4.45□□□□□ -1.7
LIG4-205ENST00000614526 RLBP1P12271 317 aa4.44□□□□□ -1.7
LIG4-205ENST00000614526 NFE2L2Q16236 605 aa4.44□□□□□ -1.7
LIG4-205ENST00000614526 KRT24Q2M2I5 525 aa4.44□□□□□ -1.7
LIG4-205ENST00000614526 PNNQ9H307 717 aaKnown RBP4.44□□□□□ -1.7
LIG4-205ENST00000614526 SMC4Q9NTJ3 1288 aa4.44□□□□□ -1.7
LIG4-205ENST00000614526 CDC42BPGQ6DT37 1551 aa4.44□□□□□ -1.7
LIG4-205ENST00000614526 COL3A1P02461 1466 aaPredicted RBP4.44□□□□□ -1.7
LIG4-205ENST00000614526 KDM4FA0A1W2PPD8 638 aa4.44□□□□□ -1.7
LIG4-205ENST00000614526 TSPYL6Q8N831 410 aa4.44□□□□□ -1.7
LIG4-205ENST00000614526 PTCH1Q13635 1447 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 194.5 ms