RNA–Protein interactions for RNA: ENST00000614404.1

UBB-209, Transcript of ubiquitin B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene UBB, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-209ENST00000614404 RWDD1Q9H446 243 aaPredicted RBP13.18□□□□□ -0.3
UBB-209ENST00000614404 RIMS2Q9UQ26 1411 aa13.18□□□□□ -0.3
UBB-209ENST00000614404 MED1Q15648 1581 aaPredicted RBP13.18□□□□□ -0.3
UBB-209ENST00000614404 TNRQ92752 1358 aa13.18□□□□□ -0.3
UBB-209ENST00000614404 NSD3Q9BZ95 1437 aa13.17□□□□□ -0.3
UBB-209ENST00000614404 BCAR3O75815 825 aa13.17□□□□□ -0.3
UBB-209ENST00000614404 TMEM132EQ6IEE7 984 aa13.17□□□□□ -0.3
UBB-209ENST00000614404 CCDC146Q8IYE0 955 aa13.17□□□□□ -0.3
UBB-209ENST00000614404 MYH16Q9H6N6 1097 aa13.17□□□□□ -0.3
UBB-209ENST00000614404 DLC1Q96QB1 1528 aa13.17□□□□□ -0.3
UBB-209ENST00000614404 ABCC11Q96J66 1382 aa13.17□□□□□ -0.3
UBB-209ENST00000614404 RARSP54136 660 aaKnown RBP13.16□□□□□ -0.3
UBB-209ENST00000614404 SKAP1Q86WV1 359 aa13.16□□□□□ -0.3
UBB-209ENST00000614404 TBC1D32Q96NH3 1257 aa13.16□□□□□ -0.3
UBB-209ENST00000614404 CARD14Q9BXL6 1004 aa13.16□□□□□ -0.3
UBB-209ENST00000614404 SPINK5Q9NQ38 1064 aaPredicted RBP13.16□□□□□ -0.3
UBB-209ENST00000614404 TULP4Q9NRJ4 1543 aa13.16□□□□□ -0.3
UBB-209ENST00000614404 FRAT2O75474 233 aaPredicted RBP13.15□□□□□ -0.3
UBB-209ENST00000614404 IGHDP01880 384 aa13.15□□□□□ -0.3
UBB-209ENST00000614404 RSPH6AQ9H0K4 717 aa13.15□□□□□ -0.3
UBB-209ENST00000614404 MED14O60244 1454 aa13.15□□□□□ -0.3
UBB-209ENST00000614404 ZNF142P52746 1687 aaPredicted RBP13.15□□□□□ -0.31
UBB-209ENST00000614404 YTHDC2Q9H6S0 1430 aaKnown RBP13.14□□□□□ -0.31
UBB-209ENST00000614404 MORC1Q86VD1 984 aa13.14□□□□□ -0.31
UBB-209ENST00000614404 BRPF3Q9ULD4 1205 aa13.14□□□□□ -0.31
UBB-209ENST00000614404 ISY1Q9ULR0 285 aaKnown RBP13.14□□□□□ -0.31
UBB-209ENST00000614404 TRAK1Q9UPV9 953 aa13.14□□□□□ -0.31
UBB-209ENST00000614404 ANKRD36BQ8N2N9 1353 aa13.14□□□□□ -0.31
UBB-209ENST00000614404 IL16Q14005 1332 aa13.13□□□□□ -0.31
UBB-209ENST00000614404 NCKAP5LQ9HCH0 1330 aa13.13□□□□□ -0.31
UBB-209ENST00000614404 SLC4A3P48751 1232 aa13.13□□□□□ -0.31
UBB-209ENST00000614404 NUTM2DQ5VT03 806 aaPredicted RBP13.13□□□□□ -0.31
UBB-209ENST00000614404 ANTXR1Q9H6X2 564 aa13.13□□□□□ -0.31
UBB-209ENST00000614404 KNDC1Q76NI1 1749 aa13.13□□□□□ -0.31
UBB-209ENST00000614404 ARHGAP23Q9P227 1491 aa13.12□□□□□ -0.31
UBB-209ENST00000614404 UBAP1LF5GYI3 381 aa13.12□□□□□ -0.31
UBB-209ENST00000614404 TMEM2Q9UHN6 1383 aa13.11□□□□□ -0.31
UBB-209ENST00000614404 EIF5BO60841 1220 aaKnown RBP13.11□□□□□ -0.31
UBB-209ENST00000614404 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.11□□□□□ -0.31
UBB-209ENST00000614404 COG6Q9Y2V7 657 aa13.11□□□□□ -0.31
UBB-209ENST00000614404 SLIT1O75093 1534 aa13.11□□□□□ -0.31
UBB-209ENST00000614404 PTMSP20962 102 aa13.1□□□□□ -0.31
UBB-209ENST00000614404 HSPA1LP34931 641 aa13.1□□□□□ -0.31
UBB-209ENST00000614404 HDAC1Q13547 482 aaPredicted RBP13.1□□□□□ -0.31
UBB-209ENST00000614404 MVPQ14764 893 aaKnown RBP13.1□□□□□ -0.31
UBB-209ENST00000614404 TCP11L2Q8N4U5 519 aa13.1□□□□□ -0.31
UBB-209ENST00000614404 PANK1Q8TE04 598 aa13.1□□□□□ -0.31
UBB-209ENST00000614404 TECPR2O15040 1411 aa13.1□□□□□ -0.31
UBB-209ENST00000614404 CDC42BPGQ6DT37 1551 aa13.1□□□□□ -0.31
UBB-209ENST00000614404 ZKSCAN2Q63HK3 967 aa13.09□□□□□ -0.31
UBB-209ENST00000614404 SIRT1Q96EB6 747 aa13.09□□□□□ -0.31
UBB-209ENST00000614404 ESF1Q9H501 851 aaKnown RBP13.09□□□□□ -0.31
UBB-209ENST00000614404 CEP170BQ9Y4F5 1589 aaPredicted RBP13.09□□□□□ -0.31
UBB-209ENST00000614404 ADAMTS13Q76LX8 1427 aa13.08□□□□□ -0.32
UBB-209ENST00000614404 PNNQ9H307 717 aaKnown RBP13.08□□□□□ -0.32
UBB-209ENST00000614404 ANO8Q9HCE9 1232 aaPredicted RBP13.08□□□□□ -0.32
UBB-209ENST00000614404 PDZRN3Q9UPQ7 1066 aa13.08□□□□□ -0.32
UBB-209ENST00000614404 EVC2Q86UK5 1308 aa13.08□□□□□ -0.32
UBB-209ENST00000614404 ZNF428Q96B54 188 aa13.07□□□□□ -0.32
UBB-209ENST00000614404 CHMP4BQ9H444 224 aaKnown RBP13.07□□□□□ -0.32
UBB-209ENST00000614404 CHMP5Q9NZZ3 219 aa13.07□□□□□ -0.32
UBB-209ENST00000614404 DDX19BQ9UMR2 479 aa13.07□□□□□ -0.32
UBB-209ENST00000614404 KIF16BQ96L93 1317 aa13.07□□□□□ -0.32
UBB-209ENST00000614404 NCOA3Q9Y6Q9 1424 aa13.06□□□□□ -0.32
UBB-209ENST00000614404 COL3A1P02461 1466 aaPredicted RBP13.06□□□□□ -0.32
UBB-209ENST00000614404 DDX11L8A8MPP1 907 aa13.06□□□□□ -0.32
UBB-209ENST00000614404 DZIP1LQ8IYY4 767 aaKnown RBP13.06□□□□□ -0.32
UBB-209ENST00000614404 STAG3Q9UJ98 1225 aa13.06□□□□□ -0.32
UBB-209ENST00000614404 CIZ1Q9ULV3 898 aaPredicted RBP13.06□□□□□ -0.32
UBB-209ENST00000614404 PCDHB15Q9Y5E8 787 aa13.06□□□□□ -0.32
UBB-209ENST00000614404 CPS1P31327 1500 aa13.06□□□□□ -0.32
UBB-209ENST00000614404 PLEKHG1Q9ULL1 1385 aa13.06□□□□□ -0.32
UBB-209ENST00000614404 FAM135BQ49AJ0 1406 aa13.05□□□□□ -0.32
UBB-209ENST00000614404 FSD2A1L4K1 749 aa13.05□□□□□ -0.32
UBB-209ENST00000614404 TBC1D2Q9BYX2 928 aa13.05□□□□□ -0.32
UBB-209ENST00000614404 RTN4Q9NQC3 1192 aaKnown RBP13.05□□□□□ -0.32
UBB-209ENST00000614404 METP08581 1390 aa13.05□□□□□ -0.32
UBB-209ENST00000614404 KIF20BQ96Q89 1820 aa13.04□□□□□ -0.32
UBB-209ENST00000614404 PRKCSHP14314 528 aaPredicted RBP13.04□□□□□ -0.32
UBB-209ENST00000614404 HDGFP51858 240 aaKnown RBP13.04□□□□□ -0.32
UBB-209ENST00000614404 PPIP5K1Q6PFW1 1433 aa13.04□□□□□ -0.32
UBB-209ENST00000614404 CD163L1Q9NR16 1453 aa13.04□□□□□ -0.32
UBB-209ENST00000614404 IPO8O15397 1037 aaKnown RBP13.03□□□□□ -0.32
UBB-209ENST00000614404 SEC24BO95487 1268 aa13.03□□□□□ -0.32
UBB-209ENST00000614404 MCM4P33991 863 aa13.03□□□□□ -0.32
UBB-209ENST00000614404 MTHFSP49914 203 aa13.03□□□□□ -0.32
UBB-209ENST00000614404 BRPF1P55201 1214 aaPredicted RBP13.03□□□□□ -0.32
UBB-209ENST00000614404 SMC5Q8IY18 1101 aa13.03□□□□□ -0.32
UBB-209ENST00000614404 FTSJ3Q8IY81 847 aaKnown RBP13.03□□□□□ -0.32
UBB-209ENST00000614404 SNX21Q969T3 373 aa13.03□□□□□ -0.32
UBB-209ENST00000614404 CFAP44Q96MT7 982 aa13.03□□□□□ -0.32
UBB-209ENST00000614404 SLC12A5Q9H2X9 1139 aa13.03□□□□□ -0.32
UBB-209ENST00000614404 ATAD2Q6PL18 1390 aa13.03□□□□□ -0.32
UBB-209ENST00000614404 RLBP1P12271 317 aa13.02□□□□□ -0.33
UBB-209ENST00000614404 LTKP29376 864 aa13.02□□□□□ -0.33
UBB-209ENST00000614404 PRAM1Q96QH2 718 aa13.02□□□□□ -0.33
UBB-209ENST00000614404 GOLGA6L3A6NEY3 463 aa13.01□□□□□ -0.33
UBB-209ENST00000614404 ALDH1L2Q3SY69 923 aa13.01□□□□□ -0.33
UBB-209ENST00000614404 HSCBQ8IWL3 235 aa13.01□□□□□ -0.33
UBB-209ENST00000614404 C22orf23Q9BZE7 217 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms