RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 PLEKHF1Q96S99 279 aa14.05□□□□□ -0.16
SENP3-EIF4A1-201ENST00000614237 CABP2Q9NPB3 220 aa14.05□□□□□ -0.16
SENP3-EIF4A1-201ENST00000614237 SPRYD3Q8NCJ5 442 aa14.04□□□□□ -0.16
SENP3-EIF4A1-201ENST00000614237 NRKQ7Z2Y5 1582 aa14.04□□□□□ -0.16
SENP3-EIF4A1-201ENST00000614237 RIMS1Q86UR5 1692 aaKnown RBP14.04□□□□□ -0.16
SENP3-EIF4A1-201ENST00000614237 HDGFP51858 240 aaKnown RBP14.04□□□□□ -0.16
SENP3-EIF4A1-201ENST00000614237 AATKQ6ZMQ8 1374 aa14.04□□□□□ -0.16
SENP3-EIF4A1-201ENST00000614237 VIRMAQ69YN4 1812 aaKnown RBP14.03□□□□□ -0.16
SENP3-EIF4A1-201ENST00000614237 FYB1O15117 783 aa14.03□□□□□ -0.16
SENP3-EIF4A1-201ENST00000614237 NFKBIBQ15653 356 aa14.03□□□□□ -0.16
SENP3-EIF4A1-201ENST00000614237 CCDC146Q8IYE0 955 aa14.03□□□□□ -0.16
SENP3-EIF4A1-201ENST00000614237 EDC4Q6P2E9 1401 aaKnown RBP14.03□□□□□ -0.16
SENP3-EIF4A1-201ENST00000614237 SLIT1O75093 1534 aa14.03□□□□□ -0.16
SENP3-EIF4A1-201ENST00000614237 ITSN1Q15811 1721 aa14.03□□□□□ -0.16
SENP3-EIF4A1-201ENST00000614237 GSE1Q14687 1217 aa14.03□□□□□ -0.16
SENP3-EIF4A1-201ENST00000614237 DIP2AQ14689 1571 aa14.02□□□□□ -0.16
SENP3-EIF4A1-201ENST00000614237 CDK19Q9BWU1 502 aa14.02□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 BACH2Q9BYV9 841 aa14.02□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 PPM1GO15355 546 aaPredicted RBP14.02□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 HDGFL2Q7Z4V5 671 aaPredicted RBP14.02□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 TCP11L2Q8N4U5 519 aa14.02□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 PNNQ9H307 717 aaKnown RBP14.02□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 ARHGAP23Q9P227 1491 aa14.01□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 FRAT2O75474 233 aaPredicted RBP14.01□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 C20orf194Q5TEA3 1177 aa14.01□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 TNRQ92752 1358 aa14.01□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 PPIP5K1Q6PFW1 1433 aa14.01□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 TMEM2Q9UHN6 1383 aa14.01□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 SLKQ9H2G2 1235 aaPredicted RBP14.01□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 NALCNQ8IZF0 1738 aa14□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 CDK12Q9NYV4 1490 aaPredicted RBP14□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 POGKQ9P215 609 aa14□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 DMRT2Q9Y5R5 561 aa14□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 PLEKHG1Q9ULL1 1385 aa14□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 NUTM2DQ5VT03 806 aaPredicted RBP13.99□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 SRPK2P78362 688 aaKnown RBP13.99□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 ADAMTS13Q76LX8 1427 aa13.99□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 MYH16Q9H6N6 1097 aa13.98□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 MAP2P11137 1827 aaKnown RBP13.98□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 TRHP20396 242 aaPredicted RBP13.98□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 METP08581 1390 aa13.98□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 USP54Q70EL1 1684 aa13.98□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 RARSP54136 660 aaKnown RBP13.97□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 GZF1Q9H116 711 aaPredicted RBP13.97□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 LRRC7Q96NW7 1537 aa13.97□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 WASLO00401 505 aaPredicted RBP13.97□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.96□□□□□ -0.17
SENP3-EIF4A1-201ENST00000614237 MINK1Q8N4C8 1332 aaPredicted RBP13.96□□□□□ -0.18
SENP3-EIF4A1-201ENST00000614237 STK26Q9P289 416 aa13.95□□□□□ -0.18
SENP3-EIF4A1-201ENST00000614237 STAG3Q9UJ98 1225 aa13.95□□□□□ -0.18
SENP3-EIF4A1-201ENST00000614237 FCHSD2O94868 740 aa13.95□□□□□ -0.18
SENP3-EIF4A1-201ENST00000614237 BRPF1P55201 1214 aaPredicted RBP13.95□□□□□ -0.18
SENP3-EIF4A1-201ENST00000614237 BCAR3O75815 825 aa13.94□□□□□ -0.18
SENP3-EIF4A1-201ENST00000614237 CABP1Q9NZU7 370 aa13.94□□□□□ -0.18
SENP3-EIF4A1-201ENST00000614237 PTCH1Q13635 1447 aa13.94□□□□□ -0.18
SENP3-EIF4A1-201ENST00000614237 ZNF428Q96B54 188 aa13.93□□□□□ -0.18
SENP3-EIF4A1-201ENST00000614237 ZNF692Q9BU19 519 aaPredicted RBP13.93□□□□□ -0.18
SENP3-EIF4A1-201ENST00000614237 TRIM35Q9UPQ4 493 aa13.93□□□□□ -0.18
SENP3-EIF4A1-201ENST00000614237 RGPD1P0DJD0 1748 aa13.93□□□□□ -0.18
SENP3-EIF4A1-201ENST00000614237 TMPOP42166 694 aaKnown RBP13.93□□□□□ -0.18
SENP3-EIF4A1-201ENST00000614237 XRN1Q8IZH2 1706 aaKnown RBP13.92□□□□□ -0.18
SENP3-EIF4A1-201ENST00000614237 DIAPH1O60610 1272 aaKnown RBP13.92□□□□□ -0.18
SENP3-EIF4A1-201ENST00000614237 FER1L4A9Z1Z3 1794 aa13.91□□□□□ -0.18
SENP3-EIF4A1-201ENST00000614237 NAP1L5Q96NT1 182 aaPredicted RBP13.91□□□□□ -0.18
SENP3-EIF4A1-201ENST00000614237 SSH2Q76I76 1423 aa13.91□□□□□ -0.18
SENP3-EIF4A1-201ENST00000614237 U2AF1L5P0DN76 240 aaPredicted RBP13.91□□□□□ -0.18
SENP3-EIF4A1-201ENST00000614237 U2AF1Q01081 240 aaKnown RBP eCLIP13.91□□□□□ -0.181e-8■■■■■ 28
SENP3-EIF4A1-201ENST00000614237 GGNBP2Q9H3C7 697 aa13.91□□□□□ -0.18
SENP3-EIF4A1-201ENST00000614237 CLUAP1Q96AJ1 413 aa13.9□□□□□ -0.18
SENP3-EIF4A1-201ENST00000614237 POLKQ9UBT6 870 aa13.9□□□□□ -0.18
SENP3-EIF4A1-201ENST00000614237 RSPH6AQ9H0K4 717 aa13.89□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 CCDC61Q9Y6R9 512 aa13.89□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 PLEKHG3A1L390 1219 aa13.89□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 DDRGK1Q96HY6 314 aa13.89□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 TNNT2P45379 298 aaPredicted RBP13.88□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 WAPLQ7Z5K2 1190 aa13.88□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 PMFBP1Q8TBY8 1022 aa13.88□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 SAFB2Q14151 953 aaKnown RBP eCLIP13.88□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 OVOS2A0A0J9YW53 1432 aa13.88□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 OVOS2Q6IE36 1432 aa13.88□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 USP31Q70CQ4 1352 aa13.88□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 ALDH1L2Q3SY69 923 aa13.87□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 ESF1Q9H501 851 aaKnown RBP13.87□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 ROBO2Q9HCK4 1378 aa13.87□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 FAM161AQ3B820 660 aa13.87□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 MAPK8IP3Q9UPT6 1336 aa13.87□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 VSIG10Q8N0Z9 540 aa13.87□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 NUDT16Q96DE0 195 aaKnown RBP13.87□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 DLG5Q8TDM6 1919 aa13.87□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 IL13P35225 146 aa13.86□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 PIK3R4Q99570 1358 aa13.86□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 USP35Q9P2H5 1018 aa13.86□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 ZNF142P52746 1687 aaPredicted RBP13.86□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 C8orf34Q49A92 452 aa13.86□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 PTPRUQ92729 1446 aa13.85□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 CALD1Q05682 793 aaKnown RBP13.85□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 TBX22Q9Y458 520 aa13.85□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 UBE2Q2Q8WVN8 375 aa13.85□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 FMN2Q9NZ56 1722 aa13.84□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 RRP7AQ9Y3A4 280 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms