RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 ADGRB2O60241 1585 aa28.56■■■□□ 2.16
POLR2J3-220ENST00000613744 MSH6P52701 1360 aa28.55■■■□□ 2.16
POLR2J3-220ENST00000613744 CDCA8Q53HL2 280 aa28.54■■■□□ 2.16
POLR2J3-220ENST00000613744 PRR36Q9H6K5 1346 aa28.53■■■□□ 2.16
POLR2J3-220ENST00000613744 ATF3P18847 181 aa28.53■■■□□ 2.16
POLR2J3-220ENST00000613744 FAM43AQ8N2R8 423 aa28.52■■■□□ 2.16
POLR2J3-220ENST00000613744 NUDT16Q96DE0 195 aaKnown RBP28.52■■■□□ 2.16
POLR2J3-220ENST00000613744 NCOA3Q9Y6Q9 1424 aa28.52■■■□□ 2.16
POLR2J3-220ENST00000613744 CDC42BPGQ6DT37 1551 aa28.5■■■□□ 2.15
POLR2J3-220ENST00000613744 FRAT1Q92837 279 aaPredicted RBP28.49■■■□□ 2.15
POLR2J3-220ENST00000613744 SLC12A5Q9H2X9 1139 aa28.49■■■□□ 2.15
POLR2J3-220ENST00000613744 RGPD8O14715 1765 aaPredicted RBP28.48■■■□□ 2.15
POLR2J3-220ENST00000613744 FMN2Q9NZ56 1722 aa28.47■■■□□ 2.15
POLR2J3-220ENST00000613744 CABP1Q9NZU7 370 aa28.47■■■□□ 2.15
POLR2J3-220ENST00000613744 DAXXQ9UER7 740 aaPredicted RBP28.47■■■□□ 2.15
POLR2J3-220ENST00000613744 CADPS2Q86UW7 1296 aa28.46■■■□□ 2.15
POLR2J3-220ENST00000613744 ATP7BP35670 1465 aa28.46■■■□□ 2.15
POLR2J3-220ENST00000613744 USP32Q8NFA0 1604 aa28.45■■■□□ 2.15
POLR2J3-220ENST00000613744 PMFBP1Q8TBY8 1022 aa28.44■■■□□ 2.14
POLR2J3-220ENST00000613744 ATAD2Q6PL18 1390 aa28.44■■■□□ 2.14
POLR2J3-220ENST00000613744 CCDC61Q9Y6R9 512 aa28.44■■■□□ 2.14
POLR2J3-220ENST00000613744 CNGB1Q14028 1251 aaPredicted RBP28.43■■■□□ 2.14
POLR2J3-220ENST00000613744 ESCO1Q5FWF5 840 aa28.43■■■□□ 2.14
POLR2J3-220ENST00000613744 ORAI2Q96SN7 254 aa28.43■■■□□ 2.14
POLR2J3-220ENST00000613744 DCCP43146 1447 aa28.42■■■□□ 2.14
POLR2J3-220ENST00000613744 PPIP5K1Q6PFW1 1433 aa28.42■■■□□ 2.14
POLR2J3-220ENST00000613744 NLRP13Q86W25 1043 aa28.41■■■□□ 2.14
POLR2J3-220ENST00000613744 PUS7Q96PZ0 661 aaKnown RBP28.41■■■□□ 2.14
POLR2J3-220ENST00000613744 MST1RQ04912 1400 aa28.41■■■□□ 2.14
POLR2J3-220ENST00000613744 MYOM1P52179 1685 aa28.4■■■□□ 2.14
POLR2J3-220ENST00000613744 CERKQ8TCT0 537 aa28.39■■■□□ 2.14
POLR2J3-220ENST00000613744 PANK3Q9H999 370 aa28.39■■■□□ 2.14
POLR2J3-220ENST00000613744 SLAIN2Q9P270 581 aa28.39■■■□□ 2.14
POLR2J3-220ENST00000613744 C1orf167Q5SNV9 1468 aa28.39■■■□□ 2.14
POLR2J3-220ENST00000613744 PARD3Q8TEW0 1356 aa28.39■■■□□ 2.13
POLR2J3-220ENST00000613744 ANKARQ7Z5J8 1434 aa28.37■■■□□ 2.13
POLR2J3-220ENST00000613744 KDM2BQ8NHM5 1336 aa28.36■■■□□ 2.13
POLR2J3-220ENST00000613744 BLMP54132 1417 aaPredicted RBP28.36■■■□□ 2.13
POLR2J3-220ENST00000613744 FAM161AQ3B820 660 aa28.34■■■□□ 2.13
POLR2J3-220ENST00000613744 CENPQQ7L2Z9 268 aaPredicted RBP28.34■■■□□ 2.13
POLR2J3-220ENST00000613744 PHF8Q9UPP1 1060 aa28.34■■■□□ 2.13
POLR2J3-220ENST00000613744 EIF5BO60841 1220 aaKnown RBP28.34■■■□□ 2.13
POLR2J3-220ENST00000613744 TOPAZ1Q8N9V7 1692 aa28.33■■■□□ 2.13
POLR2J3-220ENST00000613744 ACEP12821 1306 aa28.33■■■□□ 2.13
POLR2J3-220ENST00000613744 NGDNQ8NEJ9 315 aaKnown RBP28.33■■■□□ 2.13
POLR2J3-220ENST00000613744 DDX17Q92841 729 aaKnown RBP28.33■■■□□ 2.13
POLR2J3-220ENST00000613744 CRBNQ96SW2 442 aa28.32■■■□□ 2.12
POLR2J3-220ENST00000613744 PLEKHG3A1L390 1219 aa28.31■■■□□ 2.12
POLR2J3-220ENST00000613744 FOXO3O43524 673 aa28.31■■■□□ 2.12
POLR2J3-220ENST00000613744 ITSN1Q15811 1721 aa28.31■■■□□ 2.12
POLR2J3-220ENST00000613744 UBAP1LF5GYI3 381 aa28.3■■■□□ 2.12
POLR2J3-220ENST00000613744 PIP4K2BP78356 416 aa28.3■■■□□ 2.12
POLR2J3-220ENST00000613744 A0A1W2PP64 1363 aa28.3■■■□□ 2.12
POLR2J3-220ENST00000613744 CD163L1Q9NR16 1453 aa28.3■■■□□ 2.12
POLR2J3-220ENST00000613744 XPCQ01831 940 aaPredicted RBP28.3■■■□□ 2.12
POLR2J3-220ENST00000613744 BRINP3Q76B58 766 aa28.29■■■□□ 2.12
POLR2J3-220ENST00000613744 CARD14Q9BXL6 1004 aa28.29■■■□□ 2.12
POLR2J3-220ENST00000613744 TERF2IPQ9NYB0 399 aa28.28■■■□□ 2.12
POLR2J3-220ENST00000613744 NINLQ9Y2I6 1382 aa28.28■■■□□ 2.12
POLR2J3-220ENST00000613744 HDGFL2Q7Z4V5 671 aaPredicted RBP28.28■■■□□ 2.12
POLR2J3-220ENST00000613744 ANKRD36BQ8N2N9 1353 aa28.27■■■□□ 2.12
POLR2J3-220ENST00000613744 TOM1O60784 492 aa28.27■■■□□ 2.12
POLR2J3-220ENST00000613744 PER1O15534 1290 aaPredicted RBP28.25■■■□□ 2.11
POLR2J3-220ENST00000613744 SENP3-EIF4A1A0A087X0R7 540 aa28.23■■■□□ 2.11
POLR2J3-220ENST00000613744 C8orf34Q49A92 452 aa28.23■■■□□ 2.11
POLR2J3-220ENST00000613744 CPSF1Q10570 1443 aaKnown RBP28.23■■■□□ 2.11
POLR2J3-220ENST00000613744 PSME1Q06323 249 aa28.23■■■□□ 2.11
POLR2J3-220ENST00000613744 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.23■■■□□ 2.11
POLR2J3-220ENST00000613744 KNSTRNQ9Y448 316 aa28.23■■■□□ 2.11
POLR2J3-220ENST00000613744 POLR3AO14802 1390 aaPredicted RBP28.22■■■□□ 2.11
POLR2J3-220ENST00000613744 NSD3Q9BZ95 1437 aa28.21■■■□□ 2.11
POLR2J3-220ENST00000613744 CC2D1BQ5T0F9 858 aaKnown RBP28.21■■■□□ 2.11
POLR2J3-220ENST00000613744 CDCA7LQ96GN5 454 aa28.2■■■□□ 2.11
POLR2J3-220ENST00000613744 IQSEC2Q5JU85 1478 aa28.2■■■□□ 2.1
POLR2J3-220ENST00000613744 FRAT2O75474 233 aaPredicted RBP28.2■■■□□ 2.1
POLR2J3-220ENST00000613744 ZNF692Q9BU19 519 aaPredicted RBP28.2■■■□□ 2.1
POLR2J3-220ENST00000613744 VIRMAQ69YN4 1812 aaKnown RBP28.19■■■□□ 2.1
POLR2J3-220ENST00000613744 ROBO1Q9Y6N7 1651 aa28.18■■■□□ 2.1
POLR2J3-220ENST00000613744 AKAP12Q02952 1782 aa28.18■■■□□ 2.1
POLR2J3-220ENST00000613744 SLC4A3P48751 1232 aa28.18■■■□□ 2.1
POLR2J3-220ENST00000613744 PLIN1O60240 522 aa28.17■■■□□ 2.1
POLR2J3-220ENST00000613744 USP6P35125 1406 aa28.17■■■□□ 2.1
POLR2J3-220ENST00000613744 KRT28Q7Z3Y7 464 aa28.17■■■□□ 2.1
POLR2J3-220ENST00000613744 KIF1AQ12756 1690 aa28.17■■■□□ 2.1
POLR2J3-220ENST00000613744 L1TD1Q5T7N2 865 aaKnown RBP28.16■■■□□ 2.1
POLR2J3-220ENST00000613744 MON2Q7Z3U7 1717 aa28.14■■■□□ 2.1
POLR2J3-220ENST00000613744 NPHP3Q7Z494 1330 aa28.14■■■□□ 2.1
POLR2J3-220ENST00000613744 GLIPR1L2Q4G1C9 344 aa28.14■■■□□ 2.09
POLR2J3-220ENST00000613744 PLEKHG5O94827 1062 aa28.13■■■□□ 2.09
POLR2J3-220ENST00000613744 TTC21BQ7Z4L5 1316 aa28.13■■■□□ 2.09
POLR2J3-220ENST00000613744 NUTM2GQ5VZR2 741 aa28.12■■■□□ 2.09
POLR2J3-220ENST00000613744 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.12■■■□□ 2.09
POLR2J3-220ENST00000613744 ZRANB1Q9UGI0 708 aa28.12■■■□□ 2.09
POLR2J3-220ENST00000613744 LMOD2Q6P5Q4 547 aa28.12■■■□□ 2.09
POLR2J3-220ENST00000613744 NME9Q86XW9 330 aa28.12■■■□□ 2.09
POLR2J3-220ENST00000613744 EDC4Q6P2E9 1401 aaKnown RBP28.12■■■□□ 2.09
POLR2J3-220ENST00000613744 AMER1Q5JTC6 1135 aaPredicted RBP28.11■■■□□ 2.09
POLR2J3-220ENST00000613744 GGNBP2Q9H3C7 697 aa28.11■■■□□ 2.09
POLR2J3-220ENST00000613744 CGNL1Q0VF96 1302 aa28.09■■■□□ 2.09
POLR2J3-220ENST00000613744 SSH2Q76I76 1423 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms