RNA–Protein interactions for RNA: ENST00000613513.1

GTF2I-213, Transcript of general transcription factor IIi, humanhuman

TSL 4

Gene GTF2I, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-213ENST00000613513 ROCK2O75116 1388 aaKnown RBP28.03■■■□□ 2.08
GTF2I-213ENST00000613513 CCDC125Q86Z20 511 aa28.03■■■□□ 2.08
GTF2I-213ENST00000613513 BRD4O60885 1362 aaPredicted RBP28.02■■■□□ 2.08
GTF2I-213ENST00000613513 TRPM3Q9HCF6 1732 aaPredicted RBP28.02■■■□□ 2.08
GTF2I-213ENST00000613513 EVC2Q86UK5 1308 aa28.01■■■□□ 2.07
GTF2I-213ENST00000613513 RALGAPBQ86X10 1494 aa28.01■■■□□ 2.07
GTF2I-213ENST00000613513 ONECUT3O60422 494 aaPredicted RBP27.99■■■□□ 2.07
GTF2I-213ENST00000613513 CCDC9Q9Y3X0 531 aaKnown RBP27.99■■■□□ 2.07
GTF2I-213ENST00000613513 ALS2Q96Q42 1657 aa27.99■■■□□ 2.07
GTF2I-213ENST00000613513 CABP2Q9NPB3 220 aa27.98■■■□□ 2.07
GTF2I-213ENST00000613513 BTG4Q9NY30 223 aa27.98■■■□□ 2.07
GTF2I-213ENST00000613513 PRDM11Q9NQV5 511 aa27.97■■■□□ 2.07
GTF2I-213ENST00000613513 NWD2Q9ULI1 1742 aa27.97■■■□□ 2.07
GTF2I-213ENST00000613513 ABTB2Q8N961 1025 aa27.96■■■□□ 2.07
GTF2I-213ENST00000613513 PPIP5K1Q6PFW1 1433 aa27.95■■■□□ 2.07
GTF2I-213ENST00000613513 TONSLQ96HA7 1378 aa27.94■■■□□ 2.06
GTF2I-213ENST00000613513 NLRP13Q86W25 1043 aa27.93■■■□□ 2.06
GTF2I-213ENST00000613513 SEPT12Q8IYM1 358 aa27.93■■■□□ 2.06
GTF2I-213ENST00000613513 TRPM1Q7Z4N2 1603 aa27.92■■■□□ 2.06
GTF2I-213ENST00000613513 CABP1Q9NZU7 370 aa27.92■■■□□ 2.06
GTF2I-213ENST00000613513 ABCA3Q99758 1704 aa27.92■■■□□ 2.06
GTF2I-213ENST00000613513 TOPAZ1Q8N9V7 1692 aa27.91■■■□□ 2.06
GTF2I-213ENST00000613513 ZNF692Q9BU19 519 aaPredicted RBP27.91■■■□□ 2.06
GTF2I-213ENST00000613513 COL14A1Q05707 1796 aaKnown RBP27.9■■■□□ 2.06
GTF2I-213ENST00000613513 GLI3P10071 1580 aa27.9■■■□□ 2.06
GTF2I-213ENST00000613513 CARD11Q9BXL7 1154 aa27.89■■■□□ 2.06
GTF2I-213ENST00000613513 PLCH1Q4KWH8 1693 aa27.87■■■□□ 2.05
GTF2I-213ENST00000613513 QRICH2Q9H0J4 1663 aa27.87■■■□□ 2.05
GTF2I-213ENST00000613513 KIAA0232Q92628 1395 aa27.86■■■□□ 2.05
GTF2I-213ENST00000613513 NUTM2GQ5VZR2 741 aa27.86■■■□□ 2.05
GTF2I-213ENST00000613513 SBNO2Q9Y2G9 1366 aa27.86■■■□□ 2.05
GTF2I-213ENST00000613513 SLC24A1O60721 1099 aa27.85■■■□□ 2.05
GTF2I-213ENST00000613513 KRT27Q7Z3Y8 459 aa27.85■■■□□ 2.05
GTF2I-213ENST00000613513 SPATA31A5Q5VU36 1347 aa27.85■■■□□ 2.05
GTF2I-213ENST00000613513 SPATA31A7Q8IWB4 1347 aa27.85■■■□□ 2.05
GTF2I-213ENST00000613513 ZC3H6P61129 1189 aaKnown RBP27.84■■■□□ 2.05
GTF2I-213ENST00000613513 USP19O94966 1318 aa27.84■■■□□ 2.05
GTF2I-213ENST00000613513 EP400Q96L91 3159 aa27.84■■■□□ 2.05
GTF2I-213ENST00000613513 CPDO75976 1380 aa27.83■■■□□ 2.05
GTF2I-213ENST00000613513 A0A0G2JS52 829 aa27.82■■■□□ 2.04
GTF2I-213ENST00000613513 GCP02774 474 aa27.82■■■□□ 2.04
GTF2I-213ENST00000613513 EVA1CP58658 441 aa27.82■■■□□ 2.04
GTF2I-213ENST00000613513 MYT1Q01538 1121 aa27.82■■■□□ 2.04
GTF2I-213ENST00000613513 USP6P35125 1406 aa27.82■■■□□ 2.04
GTF2I-213ENST00000613513 FAM98CQ17RN3 349 aaKnown RBP27.81■■■□□ 2.04
GTF2I-213ENST00000613513 NLRP6P59044 892 aa27.8■■■□□ 2.04
GTF2I-213ENST00000613513 SF3B2Q13435 895 aaKnown RBP27.8■■■□□ 2.04
GTF2I-213ENST00000613513 CRYBG1Q9Y4K1 1723 aa27.79■■■□□ 2.04
GTF2I-213ENST00000613513 BLMP54132 1417 aaPredicted RBP27.79■■■□□ 2.04
GTF2I-213ENST00000613513 CHRNA2Q15822 529 aa27.79■■■□□ 2.04
GTF2I-213ENST00000613513 PUS7Q96PZ0 661 aaKnown RBP27.78■■■□□ 2.04
GTF2I-213ENST00000613513 NRAPQ86VF7 1730 aa27.76■■■□□ 2.03
GTF2I-213ENST00000613513 SPATA31A1Q5TZJ5 1347 aa27.76■■■□□ 2.03
GTF2I-213ENST00000613513 STRN4Q9NRL3 753 aa27.76■■■□□ 2.03
GTF2I-213ENST00000613513 SSH2Q76I76 1423 aa27.75■■■□□ 2.03
GTF2I-213ENST00000613513 TTC21AQ8NDW8 1320 aa27.75■■■□□ 2.03
GTF2I-213ENST00000613513 KCNH5Q8NCM2 988 aa27.74■■■□□ 2.03
GTF2I-213ENST00000613513 ZRANB1Q9UGI0 708 aa27.73■■■□□ 2.03
GTF2I-213ENST00000613513 PHRF1Q9P1Y6 1649 aaKnown RBP27.73■■■□□ 2.03
GTF2I-213ENST00000613513 TTC21BQ7Z4L5 1316 aa27.72■■■□□ 2.03
GTF2I-213ENST00000613513 BARGINQ6ZT62 677 aa27.72■■■□□ 2.03
GTF2I-213ENST00000613513 TIMELESSQ9UNS1 1208 aa27.71■■■□□ 2.03
GTF2I-213ENST00000613513 THRAP3Q9Y2W1 955 aaKnown RBP27.71■■■□□ 2.03
GTF2I-213ENST00000613513 CPSF1Q10570 1443 aaKnown RBP27.7■■■□□ 2.03
GTF2I-213ENST00000613513 KTN1Q86UP2 1357 aaKnown RBP27.69■■■□□ 2.02
GTF2I-213ENST00000613513 NRKQ7Z2Y5 1582 aa27.69■■■□□ 2.02
GTF2I-213ENST00000613513 AATKQ6ZMQ8 1374 aa27.68■■■□□ 2.02
GTF2I-213ENST00000613513 HDGFL2Q7Z4V5 671 aaPredicted RBP27.67■■■□□ 2.02
GTF2I-213ENST00000613513 TCP11L2Q8N4U5 519 aa27.67■■■□□ 2.02
GTF2I-213ENST00000613513 BRWD3Q6RI45 1802 aa27.67■■■□□ 2.02
GTF2I-213ENST00000613513 CLSPNQ9HAW4 1339 aa27.67■■■□□ 2.02
GTF2I-213ENST00000613513 TERF2IPQ9NYB0 399 aa27.66■■■□□ 2.02
GTF2I-213ENST00000613513 LARP1Q6PKG0 1096 aaKnown RBP27.65■■■□□ 2.02
GTF2I-213ENST00000613513 TMC1Q8TDI8 760 aa27.65■■■□□ 2.02
GTF2I-213ENST00000613513 CAMTA1Q9Y6Y1 1673 aa27.65■■■□□ 2.02
GTF2I-213ENST00000613513 USP35Q9P2H5 1018 aa27.64■■■□□ 2.02
GTF2I-213ENST00000613513 SLIT3O75094 1523 aa27.63■■■□□ 2.01
GTF2I-213ENST00000613513 BAG6P46379 1132 aa27.63■■■□□ 2.01
GTF2I-213ENST00000613513 FAM196AQ6ZSG2 479 aa27.63■■■□□ 2.01
GTF2I-213ENST00000613513 C11orf95C9JLR9 678 aaPredicted RBP27.62■■■□□ 2.01
GTF2I-213ENST00000613513 PDE3BQ13370 1112 aa27.62■■■□□ 2.01
GTF2I-213ENST00000613513 ST20-MTHFSA0A0A6YYL1 179 aa27.61■■■□□ 2.01
GTF2I-213ENST00000613513 ARHGEF25Q86VW2 580 aa27.61■■■□□ 2.01
GTF2I-213ENST00000613513 NINLQ9Y2I6 1382 aa27.6■■■□□ 2.01
GTF2I-213ENST00000613513 ZBTB7CA1YPR0 619 aa27.59■■■□□ 2.01
GTF2I-213ENST00000613513 LMO7Q8WWI1 1683 aa27.59■■■□□ 2.01
GTF2I-213ENST00000613513 THSD7AQ9UPZ6 1657 aa27.59■■■□□ 2.01
GTF2I-213ENST00000613513 COL5A2P05997 1499 aaPredicted RBP27.58■■■□□ 2.01
GTF2I-213ENST00000613513 DEFB132Q7Z7B7 95 aa27.58■■■□□ 2.01
GTF2I-213ENST00000613513 TESK2Q96S53 571 aa27.58■■■□□ 2.01
GTF2I-213ENST00000613513 SLC12A5Q9H2X9 1139 aa27.58■■■□□ 2.01
GTF2I-213ENST00000613513 USP31Q70CQ4 1352 aa27.58■■■□□ 2.01
GTF2I-213ENST00000613513 CRB1P82279 1406 aa27.58■■■□□ 2
GTF2I-213ENST00000613513 AKAP12Q02952 1782 aa27.56■■■□□ 2
GTF2I-213ENST00000613513 CDCA7Q9BWT1 371 aaPredicted RBP27.56■■■□□ 2
GTF2I-213ENST00000613513 PIK3C2AO00443 1686 aa27.56■■■□□ 2
GTF2I-213ENST00000613513 TOM1L2Q6ZVM7 507 aa27.55■■■□□ 2
GTF2I-213ENST00000613513 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.55■■■□□ 2
GTF2I-213ENST00000613513 CCER1Q8TC90 406 aaPredicted RBP27.54■■■□□ 2
GTF2I-213ENST00000613513 EDC4Q6P2E9 1401 aaKnown RBP27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms