RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 IFFO2Q5TF58 517 aa10.48□□□□□ -0.73
TMCO1-208ENST00000612311 FBXO31Q5XUX0 539 aaPredicted RBP10.48□□□□□ -0.73
TMCO1-208ENST00000612311 LRRFIP1Q32MZ4 808 aaKnown RBP10.48□□□□□ -0.73
TMCO1-208ENST00000612311 HDGFL1Q5TGJ6 251 aa10.48□□□□□ -0.73
TMCO1-208ENST00000612311 TULP1O00294 542 aaPredicted RBP10.47□□□□□ -0.73
TMCO1-208ENST00000612311 RNF20Q5VTR2 975 aa10.47□□□□□ -0.73
TMCO1-208ENST00000612311 CLASRPQ8N2M8 674 aaKnown RBP10.47□□□□□ -0.73
TMCO1-208ENST00000612311 CFAP43Q8NDM7 1665 aa10.47□□□□□ -0.73
TMCO1-208ENST00000612311 GNAI2P04899 355 aa10.47□□□□□ -0.73
TMCO1-208ENST00000612311 CHMP4CQ96CF2 233 aa10.47□□□□□ -0.73
TMCO1-208ENST00000612311 THUMPD2Q9BTF0 503 aaKnown RBP10.47□□□□□ -0.73
TMCO1-208ENST00000612311 FAM135AQ9P2D6 1515 aa10.47□□□□□ -0.73
TMCO1-208ENST00000612311 WDR62O43379 1518 aa10.47□□□□□ -0.73
TMCO1-208ENST00000612311 FRAT2O75474 233 aaPredicted RBP10.47□□□□□ -0.73
TMCO1-208ENST00000612311 TMEM57Q8N5G2 664 aa10.47□□□□□ -0.73
TMCO1-208ENST00000612311 CCDC34Q96HJ3 373 aa10.47□□□□□ -0.73
TMCO1-208ENST00000612311 ADAMTS12P58397 1594 aa10.46□□□□□ -0.73
TMCO1-208ENST00000612311 SSH1Q8WYL5 1049 aa10.46□□□□□ -0.73
TMCO1-208ENST00000612311 PROSER2Q86WR7 435 aaPredicted RBP10.46□□□□□ -0.74
TMCO1-208ENST00000612311 NKTRP30414 1462 aaKnown RBP10.46□□□□□ -0.74
TMCO1-208ENST00000612311 CCT4P50991 539 aaKnown RBP10.46□□□□□ -0.74
TMCO1-208ENST00000612311 CHD1LQ86WJ1 897 aa10.46□□□□□ -0.74
TMCO1-208ENST00000612311 ABCC11Q96J66 1382 aa10.45□□□□□ -0.74
TMCO1-208ENST00000612311 SKAP1Q86WV1 359 aa10.45□□□□□ -0.74
TMCO1-208ENST00000612311 KIAA0556O60303 1618 aa10.45□□□□□ -0.74
TMCO1-208ENST00000612311 PRAG1Q86YV5 1406 aa10.45□□□□□ -0.74
TMCO1-208ENST00000612311 TPM4P67936 248 aa10.45□□□□□ -0.74
TMCO1-208ENST00000612311 AMER1Q5JTC6 1135 aaPredicted RBP10.45□□□□□ -0.74
TMCO1-208ENST00000612311 SMC3Q9UQE7 1217 aa10.45□□□□□ -0.74
TMCO1-208ENST00000612311 KDM5BQ9UGL1 1544 aa10.45□□□□□ -0.74
TMCO1-208ENST00000612311 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.45□□□□□ -0.74
TMCO1-208ENST00000612311 ITSN2Q9NZM3 1697 aa10.44□□□□□ -0.74
TMCO1-208ENST00000612311 DENND4BO75064 1496 aaPredicted RBP10.44□□□□□ -0.74
TMCO1-208ENST00000612311 NME9Q86XW9 330 aa10.44□□□□□ -0.74
TMCO1-208ENST00000612311 RABEP1Q15276 862 aa10.44□□□□□ -0.74
TMCO1-208ENST00000612311 MCTP1Q6DN14 999 aa10.44□□□□□ -0.74
TMCO1-208ENST00000612311 ZNF530Q6P9A1 599 aaPredicted RBP10.44□□□□□ -0.74
TMCO1-208ENST00000612311 TESK2Q96S53 571 aa10.44□□□□□ -0.74
TMCO1-208ENST00000612311 SYCP2Q9BX26 1530 aa10.44□□□□□ -0.74
TMCO1-208ENST00000612311 NEK4P51957 841 aa10.44□□□□□ -0.74
TMCO1-208ENST00000612311 CPLX2Q6PUV4 134 aaKnown RBP10.44□□□□□ -0.74
TMCO1-208ENST00000612311 LRPPRCP42704 1394 aaKnown RBP10.44□□□□□ -0.74
TMCO1-208ENST00000612311 VPS37CA5D8V6 355 aaPredicted RBP10.43□□□□□ -0.74
TMCO1-208ENST00000612311 SYTL4Q96C24 671 aaPredicted RBP10.43□□□□□ -0.74
TMCO1-208ENST00000612311 DUOX2Q9NRD8 1548 aa10.43□□□□□ -0.74
TMCO1-208ENST00000612311 CNTROBQ8N137 903 aa10.43□□□□□ -0.74
TMCO1-208ENST00000612311 NUP160Q12769 1436 aa10.43□□□□□ -0.74
TMCO1-208ENST00000612311 ANKLE2Q86XL3 938 aa10.43□□□□□ -0.74
TMCO1-208ENST00000612311 EMILIN1Q9Y6C2 1016 aa10.43□□□□□ -0.74
TMCO1-208ENST00000612311 WASLO00401 505 aaPredicted RBP10.43□□□□□ -0.74
TMCO1-208ENST00000612311 TRAK2O60296 914 aa10.42□□□□□ -0.74
TMCO1-208ENST00000612311 RPAP2Q8IXW5 612 aaPredicted RBP10.42□□□□□ -0.74
TMCO1-208ENST00000612311 NEUROD6Q96NK8 337 aa10.42□□□□□ -0.74
TMCO1-208ENST00000612311 SRCIN1Q9C0H9 1055 aa10.42□□□□□ -0.74
TMCO1-208ENST00000612311 PARD3Q8TEW0 1356 aa10.42□□□□□ -0.74
TMCO1-208ENST00000612311 TRAPPC8Q9Y2L5 1435 aa10.42□□□□□ -0.74
TMCO1-208ENST00000612311 NSD2O96028 1365 aa10.42□□□□□ -0.74
TMCO1-208ENST00000612311 DCTN1Q14203 1278 aa10.42□□□□□ -0.74
TMCO1-208ENST00000612311 ALDH1L2Q3SY69 923 aa10.42□□□□□ -0.74
TMCO1-208ENST00000612311 POGZQ7Z3K3 1410 aa10.42□□□□□ -0.74
TMCO1-208ENST00000612311 MSH5O43196 834 aa10.41□□□□□ -0.74
TMCO1-208ENST00000612311 MCM2P49736 904 aa10.41□□□□□ -0.74
TMCO1-208ENST00000612311 LRRCC1Q9C099 1032 aa10.41□□□□□ -0.74
TMCO1-208ENST00000612311 IFT57Q9NWB7 429 aa10.41□□□□□ -0.74
TMCO1-208ENST00000612311 CPLX1O14810 134 aa10.41□□□□□ -0.74
TMCO1-208ENST00000612311 APPP05067 770 aa10.41□□□□□ -0.74
TMCO1-208ENST00000612311 TATP17735 454 aaPredicted RBP10.41□□□□□ -0.74
TMCO1-208ENST00000612311 FSD1Q9BTV5 496 aa10.41□□□□□ -0.74
TMCO1-208ENST00000612311 MCM10Q7L590 875 aa10.4□□□□□ -0.74
TMCO1-208ENST00000612311 PZPP20742 1482 aa10.4□□□□□ -0.74
TMCO1-208ENST00000612311 BECN2A8MW95 431 aa10.4□□□□□ -0.74
TMCO1-208ENST00000612311 GOLGA6L19H0YKK7 550 aa10.4□□□□□ -0.74
TMCO1-208ENST00000612311 TMX4Q9H1E5 349 aaPredicted RBP10.4□□□□□ -0.74
TMCO1-208ENST00000612311 DISP1Q96F81 1524 aa10.4□□□□□ -0.74
TMCO1-208ENST00000612311 MRE11P49959 708 aa10.4□□□□□ -0.75
TMCO1-208ENST00000612311 TRDNQ13061 729 aa10.4□□□□□ -0.75
TMCO1-208ENST00000612311 SYNE3Q6ZMZ3 975 aa10.4□□□□□ -0.75
TMCO1-208ENST00000612311 PPP6R1Q9UPN7 881 aa10.39□□□□□ -0.75
TMCO1-208ENST00000612311 SHANK2Q9UPX8 1470 aa10.39□□□□□ -0.75
TMCO1-208ENST00000612311 RASSF8Q8NHQ8 419 aa10.39□□□□□ -0.75
TMCO1-208ENST00000612311 BICD2Q8TD16 824 aa10.39□□□□□ -0.75
TMCO1-208ENST00000612311 TRIM27P14373 513 aa10.39□□□□□ -0.75
TMCO1-208ENST00000612311 ERC1Q8IUD2 1116 aa10.39□□□□□ -0.75
TMCO1-208ENST00000612311 MIS18AQ9NYP9 233 aa10.39□□□□□ -0.75
TMCO1-208ENST00000612311 ASXL2Q76L83 1435 aa10.39□□□□□ -0.75
TMCO1-208ENST00000612311 A2MP01023 1474 aa10.38□□□□□ -0.75
TMCO1-208ENST00000612311 PER1O15534 1290 aaPredicted RBP10.38□□□□□ -0.75
TMCO1-208ENST00000612311 AKAP17AQ02040 695 aaKnown RBP10.38□□□□□ -0.75
TMCO1-208ENST00000612311 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.38□□□□□ -0.75
TMCO1-208ENST00000612311 GNAT3A8MTJ3 354 aa10.38□□□□□ -0.75
TMCO1-208ENST00000612311 K7ELQ4 463 aaPredicted RBP10.38□□□□□ -0.75
TMCO1-208ENST00000612311 ARHGEF12Q9NZN5 1544 aa10.37□□□□□ -0.75
TMCO1-208ENST00000612311 PSMA5P28066 241 aa10.37□□□□□ -0.75
TMCO1-208ENST00000612311 AMOTL2Q9Y2J4 779 aa10.37□□□□□ -0.75
TMCO1-208ENST00000612311 ASXL1Q8IXJ9 1541 aa10.37□□□□□ -0.75
TMCO1-208ENST00000612311 SRGAP3O43295 1099 aa10.37□□□□□ -0.75
TMCO1-208ENST00000612311 ARID3AQ99856 593 aa10.37□□□□□ -0.75
TMCO1-208ENST00000612311 WASHC4Q2M389 1173 aa10.37□□□□□ -0.75
TMCO1-208ENST00000612311 ANKRD36BQ8N2N9 1353 aa10.37□□□□□ -0.75
TMCO1-208ENST00000612311 FYB1O15117 783 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms