RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 G3BP1Q13283 466 aaKnown RBP eCLIP8.98□□□□□ -0.971e-6■■□□□ 12.6
CSDE1-218ENST00000610726 FOXD4L5Q5VV16 416 aaPredicted RBP8.98□□□□□ -0.97
CSDE1-218ENST00000610726 FOXD4L4Q8WXT5 416 aaPredicted RBP8.98□□□□□ -0.97
CSDE1-218ENST00000610726 NUTM2BA6NNL0 878 aaPredicted RBP8.98□□□□□ -0.97
CSDE1-218ENST00000610726 NUTM2EB1AL46 878 aaPredicted RBP8.98□□□□□ -0.97
CSDE1-218ENST00000610726 NUTM2AQ8IVF1 878 aaPredicted RBP8.98□□□□□ -0.97
CSDE1-218ENST00000610726 TEX14Q8IWB6 1497 aa8.97□□□□□ -0.97
CSDE1-218ENST00000610726 MEX3CQ5U5Q3 659 aaKnown RBP8.97□□□□□ -0.97
CSDE1-218ENST00000610726 GBP4Q96PP9 640 aa8.97□□□□□ -0.97
CSDE1-218ENST00000610726 ACEP12821 1306 aa8.97□□□□□ -0.97
CSDE1-218ENST00000610726 ST18O60284 1047 aa8.97□□□□□ -0.97
CSDE1-218ENST00000610726 C20orf194Q5TEA3 1177 aa8.97□□□□□ -0.97
CSDE1-218ENST00000610726 PDZRN3Q9UPQ7 1066 aa8.97□□□□□ -0.97
CSDE1-218ENST00000610726 UHRF1BP1LA0JNW5 1464 aa8.97□□□□□ -0.97
CSDE1-218ENST00000610726 FYB1O15117 783 aa8.97□□□□□ -0.97
CSDE1-218ENST00000610726 MSH5O43196 834 aa8.97□□□□□ -0.97
CSDE1-218ENST00000610726 TOMM22Q9NS69 142 aa8.97□□□□□ -0.97
CSDE1-218ENST00000610726 DIAPH3Q9NSV4 1193 aa8.97□□□□□ -0.97
CSDE1-218ENST00000610726 DNMT1P26358 1616 aaKnown RBP8.97□□□□□ -0.97
CSDE1-218ENST00000610726 RBM42Q9BTD8 480 aaKnown RBP8.96□□□□□ -0.97
CSDE1-218ENST00000610726 SURF6O75683 361 aaKnown RBP8.96□□□□□ -0.97
CSDE1-218ENST00000610726 HSP90B1P14625 803 aaKnown RBP8.96□□□□□ -0.97
CSDE1-218ENST00000610726 DEKP35659 375 aaKnown RBP8.96□□□□□ -0.97
CSDE1-218ENST00000610726 RTN4Q9NQC3 1192 aaKnown RBP8.96□□□□□ -0.97
CSDE1-218ENST00000610726 TULP1O00294 542 aaPredicted RBP8.96□□□□□ -0.98
CSDE1-218ENST00000610726 AAMPQ13685 434 aa8.96□□□□□ -0.98
CSDE1-218ENST00000610726 ANO2Q9NQ90 1003 aa8.96□□□□□ -0.98
CSDE1-218ENST00000610726 GNAI3P08754 354 aa8.96□□□□□ -0.98
CSDE1-218ENST00000610726 PIP4K2BP78356 416 aa8.96□□□□□ -0.98
CSDE1-218ENST00000610726 GNL2Q13823 731 aaKnown RBP8.96□□□□□ -0.98
CSDE1-218ENST00000610726 FAM177BA6PVY3 158 aa8.95□□□□□ -0.98
CSDE1-218ENST00000610726 KCNH5Q8NCM2 988 aa8.95□□□□□ -0.98
CSDE1-218ENST00000610726 SSH1Q8WYL5 1049 aa8.95□□□□□ -0.98
CSDE1-218ENST00000610726 ZRANB1Q9UGI0 708 aa8.95□□□□□ -0.98
CSDE1-218ENST00000610726 MVPQ14764 893 aaKnown RBP8.95□□□□□ -0.98
CSDE1-218ENST00000610726 TMX4Q9H1E5 349 aaPredicted RBP8.95□□□□□ -0.98
CSDE1-218ENST00000610726 NCKAP5LQ9HCH0 1330 aa8.95□□□□□ -0.98
CSDE1-218ENST00000610726 CABP4P57796 275 aa8.94□□□□□ -0.98
CSDE1-218ENST00000610726 FOXD4L6Q3SYB3 417 aaPredicted RBP8.94□□□□□ -0.98
CSDE1-218ENST00000610726 FOXD4L3Q6VB84 417 aaPredicted RBP8.94□□□□□ -0.98
CSDE1-218ENST00000610726 RIMS2Q9UQ26 1411 aa8.94□□□□□ -0.98
CSDE1-218ENST00000610726 ZMYM3Q14202 1370 aa8.94□□□□□ -0.98
CSDE1-218ENST00000610726 REC8O95072 547 aa8.94□□□□□ -0.98
CSDE1-218ENST00000610726 CT47B1P0C2W7 299 aaPredicted RBP8.94□□□□□ -0.98
CSDE1-218ENST00000610726 MYL6BP14649 208 aa8.94□□□□□ -0.98
CSDE1-218ENST00000610726 SKAP1Q86WV1 359 aa8.94□□□□□ -0.98
CSDE1-218ENST00000610726 NEUROD6Q96NK8 337 aa8.94□□□□□ -0.98
CSDE1-218ENST00000610726 CARD14Q9BXL6 1004 aa8.94□□□□□ -0.98
CSDE1-218ENST00000610726 RARSP54136 660 aaKnown RBP8.94□□□□□ -0.98
CSDE1-218ENST00000610726 DUSP27Q5VZP5 1158 aa8.94□□□□□ -0.98
CSDE1-218ENST00000610726 ADGRL2O95490 1459 aa8.94□□□□□ -0.98
CSDE1-218ENST00000610726 GNAT3A8MTJ3 354 aa8.94□□□□□ -0.98
CSDE1-218ENST00000610726 HSP90AB2PQ58FF8 381 aa8.94□□□□□ -0.98
CSDE1-218ENST00000610726 TMEM57Q8N5G2 664 aa8.94□□□□□ -0.98
CSDE1-218ENST00000610726 BTBD11A6QL63 1104 aa8.93□□□□□ -0.98
CSDE1-218ENST00000610726 SPG7Q9UQ90 795 aa8.93□□□□□ -0.98
CSDE1-218ENST00000610726 FAM83GA6ND36 823 aa8.93□□□□□ -0.98
CSDE1-218ENST00000610726 G3V3G9 751 aa8.93□□□□□ -0.98
CSDE1-218ENST00000610726 HSP90AB4PQ58FF6 505 aa8.93□□□□□ -0.98
CSDE1-218ENST00000610726 DCAF8Q5TAQ9 597 aa8.93□□□□□ -0.98
CSDE1-218ENST00000610726 GNAI2P04899 355 aa8.93□□□□□ -0.98
CSDE1-218ENST00000610726 PER1O15534 1290 aaPredicted RBP8.92□□□□□ -0.98
CSDE1-218ENST00000610726 C22orf23Q9BZE7 217 aa8.92□□□□□ -0.98
CSDE1-218ENST00000610726 FANCIQ9NVI1 1328 aa8.92□□□□□ -0.98
CSDE1-218ENST00000610726 CFAP65Q6ZU64 1925 aaKnown RBP8.92□□□□□ -0.98
CSDE1-218ENST00000610726 KRT28Q7Z3Y7 464 aa8.92□□□□□ -0.98
CSDE1-218ENST00000610726 CLASRPQ8N2M8 674 aaKnown RBP8.92□□□□□ -0.98
CSDE1-218ENST00000610726 RUFY2Q8WXA3 655 aa8.92□□□□□ -0.98
CSDE1-218ENST00000610726 SRCIN1Q9C0H9 1055 aa8.92□□□□□ -0.98
CSDE1-218ENST00000610726 ATP7AQ04656 1500 aa8.91□□□□□ -0.98
CSDE1-218ENST00000610726 DNTTIP2Q5QJE6 756 aaKnown RBP8.91□□□□□ -0.98
CSDE1-218ENST00000610726 MPRIPQ6WCQ1 1025 aa8.91□□□□□ -0.98
CSDE1-218ENST00000610726 MBD5Q9P267 1494 aa8.91□□□□□ -0.98
CSDE1-218ENST00000610726 HSPA2P54652 639 aa8.91□□□□□ -0.98
CSDE1-218ENST00000610726 INTS3Q68E01 1043 aaKnown RBP8.91□□□□□ -0.98
CSDE1-218ENST00000610726 ANKRD36BQ8N2N9 1353 aa8.91□□□□□ -0.98
CSDE1-218ENST00000610726 TTC21BQ7Z4L5 1316 aa8.91□□□□□ -0.98
CSDE1-218ENST00000610726 PTCD1O75127 700 aaKnown RBP8.91□□□□□ -0.98
CSDE1-218ENST00000610726 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.9□□□□□ -0.98
CSDE1-218ENST00000610726 ZKSCAN1P17029 563 aaPredicted RBP8.9□□□□□ -0.98
CSDE1-218ENST00000610726 KCNA6P17658 529 aa8.9□□□□□ -0.98
CSDE1-218ENST00000610726 CCT4P50991 539 aaKnown RBP8.9□□□□□ -0.98
CSDE1-218ENST00000610726 APPP05067 770 aa8.9□□□□□ -0.98
CSDE1-218ENST00000610726 CHRNA2Q15822 529 aa8.9□□□□□ -0.98
CSDE1-218ENST00000610726 NSD2O96028 1365 aa8.9□□□□□ -0.99
CSDE1-218ENST00000610726 ERC2O15083 957 aa8.9□□□□□ -0.99
CSDE1-218ENST00000610726 SIL1Q9H173 461 aa8.9□□□□□ -0.99
CSDE1-218ENST00000610726 IFT57Q9NWB7 429 aa8.9□□□□□ -0.99
CSDE1-218ENST00000610726 PARD3Q8TEW0 1356 aa8.9□□□□□ -0.99
CSDE1-218ENST00000610726 CDC45O75419 566 aa8.89□□□□□ -0.99
CSDE1-218ENST00000610726 GCC1Q96CN9 775 aa8.89□□□□□ -0.99
CSDE1-218ENST00000610726 POLKQ9UBT6 870 aa8.89□□□□□ -0.99
CSDE1-218ENST00000610726 F6X3S4 739 aa8.89□□□□□ -0.99
CSDE1-218ENST00000610726 ABCA8O94911 1581 aa8.89□□□□□ -0.99
CSDE1-218ENST00000610726 PPIP5K1Q6PFW1 1433 aa8.89□□□□□ -0.99
CSDE1-218ENST00000610726 ADAMTS2O95450 1211 aa8.89□□□□□ -0.99
CSDE1-218ENST00000610726 TAF7Q15545 349 aaPredicted RBP8.89□□□□□ -0.99
CSDE1-218ENST00000610726 VPS37DQ86XT2 251 aa8.89□□□□□ -0.99
CSDE1-218ENST00000610726 AEBP1Q8IUX7 1158 aa8.89□□□□□ -0.99
CSDE1-218ENST00000610726 NINLQ9Y2I6 1382 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms