RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 NUDT16Q96DE0 195 aaKnown RBP12.77□□□□□ -0.36
CTCFL-222ENST00000609232 RRS1Q15050 365 aaKnown RBP12.77□□□□□ -0.37
CTCFL-222ENST00000609232 TSR2Q969E8 191 aaKnown RBP12.77□□□□□ -0.37
CTCFL-222ENST00000609232 PUS7Q96PZ0 661 aaKnown RBP12.77□□□□□ -0.37
CTCFL-222ENST00000609232 A0A1W2PP64 1363 aa12.77□□□□□ -0.37
CTCFL-222ENST00000609232 CRBNQ96SW2 442 aa12.76□□□□□ -0.37
CTCFL-222ENST00000609232 NLRP1Q9C000 1473 aa12.76□□□□□ -0.37
CTCFL-222ENST00000609232 PTPRMP28827 1452 aa12.76□□□□□ -0.37
CTCFL-222ENST00000609232 PPP4R2Q9NY27 417 aa12.76□□□□□ -0.37
CTCFL-222ENST00000609232 NOP58Q9Y2X3 529 aaKnown RBP12.76□□□□□ -0.37
CTCFL-222ENST00000609232 TULP4Q9NRJ4 1543 aa12.76□□□□□ -0.37
CTCFL-222ENST00000609232 TPRNQ4KMQ1 711 aa12.76□□□□□ -0.37
CTCFL-222ENST00000609232 ANKLE2Q86XL3 938 aa12.76□□□□□ -0.37
CTCFL-222ENST00000609232 NEFMP07197 916 aa12.75□□□□□ -0.37
CTCFL-222ENST00000609232 COG6Q9Y2V7 657 aa12.75□□□□□ -0.37
CTCFL-222ENST00000609232 NPC1L1Q9UHC9 1359 aa12.75□□□□□ -0.37
CTCFL-222ENST00000609232 CCDC61Q9Y6R9 512 aa12.75□□□□□ -0.37
CTCFL-222ENST00000609232 ARHGEF28Q8N1W1 1705 aaKnown RBP12.74□□□□□ -0.37
CTCFL-222ENST00000609232 PANK1Q8TE04 598 aa12.74□□□□□ -0.37
CTCFL-222ENST00000609232 FYB1O15117 783 aa12.73□□□□□ -0.37
CTCFL-222ENST00000609232 MYO3AQ8NEV4 1616 aa12.73□□□□□ -0.37
CTCFL-222ENST00000609232 PLEKHG1Q9ULL1 1385 aa12.73□□□□□ -0.37
CTCFL-222ENST00000609232 ROBO2Q9HCK4 1378 aa12.72□□□□□ -0.37
CTCFL-222ENST00000609232 DCTN1Q14203 1278 aa12.72□□□□□ -0.37
CTCFL-222ENST00000609232 TBX22Q9Y458 520 aa12.72□□□□□ -0.37
CTCFL-222ENST00000609232 FER1L4A9Z1Z3 1794 aa12.72□□□□□ -0.37
CTCFL-222ENST00000609232 DMRT2Q9Y5R5 561 aa12.72□□□□□ -0.37
CTCFL-222ENST00000609232 NINLQ9Y2I6 1382 aa12.72□□□□□ -0.37
CTCFL-222ENST00000609232 NGDNQ8NEJ9 315 aaKnown RBP12.72□□□□□ -0.37
CTCFL-222ENST00000609232 TNNQ9UQP3 1299 aa12.72□□□□□ -0.37
CTCFL-222ENST00000609232 MYOM1P52179 1685 aa12.71□□□□□ -0.37
CTCFL-222ENST00000609232 ANP32AP39687 249 aaKnown RBP12.71□□□□□ -0.38
CTCFL-222ENST00000609232 SPINK5Q9NQ38 1064 aaPredicted RBP12.71□□□□□ -0.38
CTCFL-222ENST00000609232 NME9Q86XW9 330 aa12.7□□□□□ -0.38
CTCFL-222ENST00000609232 MIS18AQ9NYP9 233 aa12.7□□□□□ -0.38
CTCFL-222ENST00000609232 KCNA6P17658 529 aa12.7□□□□□ -0.38
CTCFL-222ENST00000609232 PPIP5K1Q6PFW1 1433 aa12.7□□□□□ -0.38
CTCFL-222ENST00000609232 MAPK8IP3Q9UPT6 1336 aa12.7□□□□□ -0.38
CTCFL-222ENST00000609232 C3P01024 1663 aa12.69□□□□□ -0.38
CTCFL-222ENST00000609232 PDE3BQ13370 1112 aa12.69□□□□□ -0.38
CTCFL-222ENST00000609232 ADAMTS13Q76LX8 1427 aa12.69□□□□□ -0.38
CTCFL-222ENST00000609232 COG3Q96JB2 828 aa12.69□□□□□ -0.38
CTCFL-222ENST00000609232 TAOK2Q9UL54 1235 aa12.69□□□□□ -0.38
CTCFL-222ENST00000609232 PDIA4P13667 645 aaKnown RBP12.68□□□□□ -0.38
CTCFL-222ENST00000609232 GOLGA2Q08379 1002 aa12.68□□□□□ -0.38
CTCFL-222ENST00000609232 SMG6Q86US8 1419 aaKnown RBP12.68□□□□□ -0.38
CTCFL-222ENST00000609232 A0A0U1RQG5 324 aaPredicted RBP12.68□□□□□ -0.38
CTCFL-222ENST00000609232 UBR1Q8IWV7 1749 aa12.68□□□□□ -0.38
CTCFL-222ENST00000609232 SIRT1Q96EB6 747 aa12.67□□□□□ -0.38
CTCFL-222ENST00000609232 RIMS1Q86UR5 1692 aaKnown RBP12.67□□□□□ -0.38
CTCFL-222ENST00000609232 FTSJ3Q8IY81 847 aaKnown RBP12.67□□□□□ -0.38
CTCFL-222ENST00000609232 TCP11L2Q8N4U5 519 aa12.67□□□□□ -0.38
CTCFL-222ENST00000609232 NSD2O96028 1365 aa12.67□□□□□ -0.38
CTCFL-222ENST00000609232 ZBTB47Q9UFB7 747 aaPredicted RBP12.66□□□□□ -0.38
CTCFL-222ENST00000609232 ACEP12821 1306 aa12.66□□□□□ -0.38
CTCFL-222ENST00000609232 PRR36Q9H6K5 1346 aa12.66□□□□□ -0.38
CTCFL-222ENST00000609232 DIAPH1O60610 1272 aaKnown RBP12.66□□□□□ -0.38
CTCFL-222ENST00000609232 ZNF692Q9BU19 519 aaPredicted RBP12.66□□□□□ -0.38
CTCFL-222ENST00000609232 EMILIN1Q9Y6C2 1016 aa12.65□□□□□ -0.38
CTCFL-222ENST00000609232 FAM135BQ49AJ0 1406 aa12.65□□□□□ -0.38
CTCFL-222ENST00000609232 POLR3AO14802 1390 aaPredicted RBP12.65□□□□□ -0.38
CTCFL-222ENST00000609232 RUNDC1Q96C34 613 aa12.65□□□□□ -0.38
CTCFL-222ENST00000609232 USP35Q9P2H5 1018 aa12.65□□□□□ -0.38
CTCFL-222ENST00000609232 DLC1Q96QB1 1528 aa12.64□□□□□ -0.39
CTCFL-222ENST00000609232 RRP1P56182 461 aaKnown RBP12.64□□□□□ -0.39
CTCFL-222ENST00000609232 C1orf115Q9H7X2 142 aa12.64□□□□□ -0.39
CTCFL-222ENST00000609232 ZNF330Q9Y3S2 320 aaPredicted RBP12.64□□□□□ -0.39
CTCFL-222ENST00000609232 USHBP1Q8N6Y0 703 aa12.63□□□□□ -0.39
CTCFL-222ENST00000609232 PTPRUQ92729 1446 aa12.63□□□□□ -0.39
CTCFL-222ENST00000609232 ERICH6BQ5W0A0 696 aa12.63□□□□□ -0.39
CTCFL-222ENST00000609232 BLMP54132 1417 aaPredicted RBP12.63□□□□□ -0.39
CTCFL-222ENST00000609232 NRXN3Q9Y4C0 1643 aa12.63□□□□□ -0.39
CTCFL-222ENST00000609232 FAM83GA6ND36 823 aa12.63□□□□□ -0.39
CTCFL-222ENST00000609232 SLC4A10Q6U841 1118 aa12.63□□□□□ -0.39
CTCFL-222ENST00000609232 ITPRIPQ8IWB1 547 aa12.63□□□□□ -0.39
CTCFL-222ENST00000609232 NGEFQ8N5V2 710 aa12.62□□□□□ -0.39
CTCFL-222ENST00000609232 RIPK4P57078 832 aa12.62□□□□□ -0.39
CTCFL-222ENST00000609232 SMC4Q9NTJ3 1288 aa12.61□□□□□ -0.39
CTCFL-222ENST00000609232 HAP1P54257 671 aaPredicted RBP12.61□□□□□ -0.39
CTCFL-222ENST00000609232 HSPA2P54652 639 aa12.61□□□□□ -0.39
CTCFL-222ENST00000609232 PROSER2Q86WR7 435 aaPredicted RBP12.61□□□□□ -0.39
CTCFL-222ENST00000609232 CEP170BQ9Y4F5 1589 aaPredicted RBP12.61□□□□□ -0.39
CTCFL-222ENST00000609232 POLKQ9UBT6 870 aa12.6□□□□□ -0.39
CTCFL-222ENST00000609232 TECPR2O15040 1411 aa12.6□□□□□ -0.39
CTCFL-222ENST00000609232 TTC21BQ7Z4L5 1316 aa12.6□□□□□ -0.39
CTCFL-222ENST00000609232 ESCO1Q5FWF5 840 aa12.6□□□□□ -0.39
CTCFL-222ENST00000609232 ARHGAP23Q9P227 1491 aa12.6□□□□□ -0.39
CTCFL-222ENST00000609232 SLIT1O75093 1534 aa12.59□□□□□ -0.39
CTCFL-222ENST00000609232 DDX17Q92841 729 aaKnown RBP12.59□□□□□ -0.39
CTCFL-222ENST00000609232 CD163L1Q9NR16 1453 aa12.59□□□□□ -0.39
CTCFL-222ENST00000609232 CCDC9Q9Y3X0 531 aaKnown RBP12.59□□□□□ -0.39
CTCFL-222ENST00000609232 EDC4Q6P2E9 1401 aaKnown RBP12.59□□□□□ -0.39
CTCFL-222ENST00000609232 NLRP6P59044 892 aa12.59□□□□□ -0.39
CTCFL-222ENST00000609232 ATP7BP35670 1465 aa12.58□□□□□ -0.4
CTCFL-222ENST00000609232 PRKAR2BP31323 418 aa12.58□□□□□ -0.4
CTCFL-222ENST00000609232 WWC1Q8IX03 1113 aa12.58□□□□□ -0.4
CTCFL-222ENST00000609232 E9PSI1 815 aa12.58□□□□□ -0.4
CTCFL-222ENST00000609232 AMPHP49418 695 aa12.58□□□□□ -0.4
CTCFL-222ENST00000609232 KRT24Q2M2I5 525 aa12.58□□□□□ -0.4
CTCFL-222ENST00000609232 SLFN5Q08AF3 891 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms