RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 TERF2IPQ9NYB0 399 aa10.62□□□□□ -0.71
MSH6-211ENST00000606499 CRYBG1Q9Y4K1 1723 aa10.61□□□□□ -0.71
MSH6-211ENST00000606499 NPHP3Q7Z494 1330 aa10.61□□□□□ -0.71
MSH6-211ENST00000606499 SSH2Q76I76 1423 aa10.61□□□□□ -0.71
MSH6-211ENST00000606499 USP54Q70EL1 1684 aa10.61□□□□□ -0.71
MSH6-211ENST00000606499 DDX10Q13206 875 aaKnown RBP10.61□□□□□ -0.71
MSH6-211ENST00000606499 HDGFL2Q7Z4V5 671 aaPredicted RBP10.61□□□□□ -0.71
MSH6-211ENST00000606499 PANK3Q9H999 370 aa10.61□□□□□ -0.71
MSH6-211ENST00000606499 PHRF1Q9P1Y6 1649 aaKnown RBP10.6□□□□□ -0.71
MSH6-211ENST00000606499 PSME1Q06323 249 aa10.6□□□□□ -0.71
MSH6-211ENST00000606499 CARD14Q9BXL6 1004 aa10.6□□□□□ -0.71
MSH6-211ENST00000606499 TNS3Q68CZ2 1445 aa10.59□□□□□ -0.71
MSH6-211ENST00000606499 KRT28Q7Z3Y7 464 aa10.59□□□□□ -0.71
MSH6-211ENST00000606499 SHPRHQ149N8 1683 aa10.59□□□□□ -0.71
MSH6-211ENST00000606499 COL22A1Q8NFW1 1626 aaPredicted RBP10.58□□□□□ -0.72
MSH6-211ENST00000606499 MED1Q15648 1581 aaPredicted RBP10.58□□□□□ -0.72
MSH6-211ENST00000606499 PAK3O75914 559 aaPredicted RBP10.58□□□□□ -0.72
MSH6-211ENST00000606499 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.58□□□□□ -0.72
MSH6-211ENST00000606499 ZNF692Q9BU19 519 aaPredicted RBP10.58□□□□□ -0.72
MSH6-211ENST00000606499 SOS2Q07890 1332 aaPredicted RBP10.58□□□□□ -0.72
MSH6-211ENST00000606499 TTC21BQ7Z4L5 1316 aa10.58□□□□□ -0.72
MSH6-211ENST00000606499 SBNO1A3KN83 1393 aa10.57□□□□□ -0.72
MSH6-211ENST00000606499 BRD4O60885 1362 aaPredicted RBP10.56□□□□□ -0.72
MSH6-211ENST00000606499 NME9Q86XW9 330 aa10.56□□□□□ -0.72
MSH6-211ENST00000606499 OVOS2A0A0J9YW53 1432 aa10.56□□□□□ -0.72
MSH6-211ENST00000606499 OVOS2Q6IE36 1432 aa10.56□□□□□ -0.72
MSH6-211ENST00000606499 SPATA31A3Q5VYP0 1347 aa10.56□□□□□ -0.72
MSH6-211ENST00000606499 PER1O15534 1290 aaPredicted RBP10.55□□□□□ -0.72
MSH6-211ENST00000606499 ZRANB1Q9UGI0 708 aa10.55□□□□□ -0.72
MSH6-211ENST00000606499 TTC21AQ8NDW8 1320 aa10.55□□□□□ -0.72
MSH6-211ENST00000606499 SLIT3O75094 1523 aa10.54□□□□□ -0.72
MSH6-211ENST00000606499 HSPA1LP34931 641 aa10.54□□□□□ -0.72
MSH6-211ENST00000606499 CNGB1Q14028 1251 aaPredicted RBP10.54□□□□□ -0.72
MSH6-211ENST00000606499 NUTM2GQ5VZR2 741 aa10.54□□□□□ -0.72
MSH6-211ENST00000606499 LMOD2Q6P5Q4 547 aa10.54□□□□□ -0.72
MSH6-211ENST00000606499 FBXO41Q8TF61 875 aa10.54□□□□□ -0.72
MSH6-211ENST00000606499 KNSTRNQ9Y448 316 aa10.54□□□□□ -0.72
MSH6-211ENST00000606499 LTN1O94822 1766 aa10.54□□□□□ -0.72
MSH6-211ENST00000606499 CGNL1Q0VF96 1302 aa10.54□□□□□ -0.72
MSH6-211ENST00000606499 ARHGEF10O15013 1369 aa10.53□□□□□ -0.72
MSH6-211ENST00000606499 PNPLA6Q8IY17 1366 aa10.53□□□□□ -0.72
MSH6-211ENST00000606499 PLEKHG5O94827 1062 aa10.53□□□□□ -0.72
MSH6-211ENST00000606499 AMER1Q5JTC6 1135 aaPredicted RBP10.53□□□□□ -0.72
MSH6-211ENST00000606499 ABTB2Q8N961 1025 aa10.53□□□□□ -0.72
MSH6-211ENST00000606499 GGNBP2Q9H3C7 697 aa10.53□□□□□ -0.72
MSH6-211ENST00000606499 NFAT5O94916 1531 aa10.53□□□□□ -0.72
MSH6-211ENST00000606499 NSD2O96028 1365 aa10.52□□□□□ -0.72
MSH6-211ENST00000606499 FYB1O15117 783 aa10.52□□□□□ -0.73
MSH6-211ENST00000606499 LRRC59Q96AG4 307 aaKnown RBP10.52□□□□□ -0.73
MSH6-211ENST00000606499 USP31Q70CQ4 1352 aa10.52□□□□□ -0.73
MSH6-211ENST00000606499 NLRP6P59044 892 aa10.51□□□□□ -0.73
MSH6-211ENST00000606499 CC2D1BQ5T0F9 858 aaKnown RBP10.51□□□□□ -0.73
MSH6-211ENST00000606499 USP19O94966 1318 aa10.51□□□□□ -0.73
MSH6-211ENST00000606499 NPC1L1Q9UHC9 1359 aa10.51□□□□□ -0.73
MSH6-211ENST00000606499 CABLES1Q8TDN4 633 aa10.5□□□□□ -0.73
MSH6-211ENST00000606499 JCADQ9P266 1359 aa10.5□□□□□ -0.73
MSH6-211ENST00000606499 PEAK1Q9H792 1746 aa10.5□□□□□ -0.73
MSH6-211ENST00000606499 MAP2P11137 1827 aaKnown RBP10.49□□□□□ -0.73
MSH6-211ENST00000606499 LRP6O75581 1613 aa10.49□□□□□ -0.73
MSH6-211ENST00000606499 SOX12O15370 315 aa10.49□□□□□ -0.73
MSH6-211ENST00000606499 COG3Q96JB2 828 aa10.49□□□□□ -0.73
MSH6-211ENST00000606499 PLCH1Q4KWH8 1693 aa10.49□□□□□ -0.73
MSH6-211ENST00000606499 RGPD5Q99666 1765 aa10.48□□□□□ -0.73
MSH6-211ENST00000606499 TNNT2P45379 298 aaPredicted RBP10.48□□□□□ -0.73
MSH6-211ENST00000606499 NLRP13Q86W25 1043 aa10.48□□□□□ -0.73
MSH6-211ENST00000606499 PARD3Q8TEW0 1356 aa10.48□□□□□ -0.73
MSH6-211ENST00000606499 MORC1Q86VD1 984 aa10.47□□□□□ -0.73
MSH6-211ENST00000606499 LMO7Q8WWI1 1683 aa10.47□□□□□ -0.73
MSH6-211ENST00000606499 COL18A1P39060 1754 aa10.47□□□□□ -0.73
MSH6-211ENST00000606499 COL14A1Q05707 1796 aaKnown RBP10.47□□□□□ -0.73
MSH6-211ENST00000606499 GCP02774 474 aa10.46□□□□□ -0.73
MSH6-211ENST00000606499 FBLN1P23142 703 aa10.46□□□□□ -0.73
MSH6-211ENST00000606499 DIEXFQ68CQ4 756 aaKnown RBP10.46□□□□□ -0.73
MSH6-211ENST00000606499 SMG6Q86US8 1419 aaKnown RBP10.45□□□□□ -0.74
MSH6-211ENST00000606499 KIAA0232Q92628 1395 aa10.45□□□□□ -0.74
MSH6-211ENST00000606499 NUTM2BA6NNL0 878 aaPredicted RBP10.45□□□□□ -0.74
MSH6-211ENST00000606499 NUTM2EB1AL46 878 aaPredicted RBP10.45□□□□□ -0.74
MSH6-211ENST00000606499 HAP1P54257 671 aaPredicted RBP10.45□□□□□ -0.74
MSH6-211ENST00000606499 NUTM2AQ8IVF1 878 aaPredicted RBP10.45□□□□□ -0.74
MSH6-211ENST00000606499 NRAPQ86VF7 1730 aa10.44□□□□□ -0.74
MSH6-211ENST00000606499 ABCC6O95255 1503 aa10.44□□□□□ -0.74
MSH6-211ENST00000606499 AATKQ6ZMQ8 1374 aa10.44□□□□□ -0.74
MSH6-211ENST00000606499 SPATA31A6Q5VVP1 1343 aa10.44□□□□□ -0.74
MSH6-211ENST00000606499 ZBTB7CA1YPR0 619 aa10.44□□□□□ -0.74
MSH6-211ENST00000606499 ZC3H6P61129 1189 aaKnown RBP10.44□□□□□ -0.74
MSH6-211ENST00000606499 KCNH5Q8NCM2 988 aa10.44□□□□□ -0.74
MSH6-211ENST00000606499 PRKRIP1Q9H875 184 aaPredicted RBP10.44□□□□□ -0.74
MSH6-211ENST00000606499 NWD2Q9ULI1 1742 aa10.44□□□□□ -0.74
MSH6-211ENST00000606499 CPDO75976 1380 aa10.43□□□□□ -0.74
MSH6-211ENST00000606499 MAP3K19Q56UN5 1328 aa10.43□□□□□ -0.74
MSH6-211ENST00000606499 RRS1Q15050 365 aaKnown RBP10.43□□□□□ -0.74
MSH6-211ENST00000606499 EMILIN1Q9Y6C2 1016 aa10.43□□□□□ -0.74
MSH6-211ENST00000606499 CDK12Q9NYV4 1490 aaPredicted RBP10.42□□□□□ -0.74
MSH6-211ENST00000606499 RGPD2P0DJD1 1756 aa10.42□□□□□ -0.74
MSH6-211ENST00000606499 FAM208AQ9UK61 1670 aaKnown RBP10.42□□□□□ -0.74
MSH6-211ENST00000606499 ANP32CO43423 234 aa10.42□□□□□ -0.74
MSH6-211ENST00000606499 ADAMTS2O95450 1211 aa10.42□□□□□ -0.74
MSH6-211ENST00000606499 PPP2R1AP30153 589 aa10.42□□□□□ -0.74
MSH6-211ENST00000606499 CHRNA2Q15822 529 aa10.42□□□□□ -0.74
MSH6-211ENST00000606499 ILDR1Q86SU0 546 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms