RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 ACEP12821 1306 aa17.59■□□□□ 0.41
CTSA-210ENST00000606000 PAK3O75914 559 aaPredicted RBP17.59■□□□□ 0.41
CTSA-210ENST00000606000 HAP1P54257 671 aaPredicted RBP17.59■□□□□ 0.41
CTSA-210ENST00000606000 RBM6P78332 1123 aaKnown RBP17.58■□□□□ 0.4
CTSA-210ENST00000606000 CCDC61Q9Y6R9 512 aa17.58■□□□□ 0.4
CTSA-210ENST00000606000 NRAPQ86VF7 1730 aa17.58■□□□□ 0.4
CTSA-210ENST00000606000 NWD2Q9ULI1 1742 aa17.57■□□□□ 0.4
CTSA-210ENST00000606000 GLI3P10071 1580 aa17.57■□□□□ 0.4
CTSA-210ENST00000606000 PCGF6Q9BYE7 350 aa17.56■□□□□ 0.4
CTSA-210ENST00000606000 TRPC5Q9UL62 973 aaPredicted RBP17.56■□□□□ 0.4
CTSA-210ENST00000606000 PLEKHG3A1L390 1219 aa17.55■□□□□ 0.4
CTSA-210ENST00000606000 NUTM2GQ5VZR2 741 aa17.55■□□□□ 0.4
CTSA-210ENST00000606000 CARD11Q9BXL7 1154 aa17.55■□□□□ 0.4
CTSA-210ENST00000606000 COL14A1Q05707 1796 aaKnown RBP17.54■□□□□ 0.4
CTSA-210ENST00000606000 NRKQ7Z2Y5 1582 aa17.53■□□□□ 0.4
CTSA-210ENST00000606000 AKAP12Q02952 1782 aa17.53■□□□□ 0.4
CTSA-210ENST00000606000 EVC2Q86UK5 1308 aa17.52■□□□□ 0.4
CTSA-210ENST00000606000 FAM83GA6ND36 823 aa17.52■□□□□ 0.4
CTSA-210ENST00000606000 UNC5CLQ8IV45 518 aa17.52■□□□□ 0.4
CTSA-210ENST00000606000 CABP1Q9NZU7 370 aa17.52■□□□□ 0.4
CTSA-210ENST00000606000 USP6P35125 1406 aa17.5■□□□□ 0.39
CTSA-210ENST00000606000 GJD4Q96KN9 370 aaPredicted RBP17.5■□□□□ 0.39
CTSA-210ENST00000606000 PIK3C2AO00443 1686 aa17.5■□□□□ 0.39
CTSA-210ENST00000606000 SBNO2Q9Y2G9 1366 aa17.49■□□□□ 0.39
CTSA-210ENST00000606000 BRWD3Q6RI45 1802 aa17.49■□□□□ 0.39
CTSA-210ENST00000606000 UPF1Q92900 1129 aaKnown RBP eCLIP17.48■□□□□ 0.393e-12■■■□□ 17.4
CTSA-210ENST00000606000 MON2Q7Z3U7 1717 aa17.47■□□□□ 0.39
CTSA-210ENST00000606000 KIAA0232Q92628 1395 aa17.47■□□□□ 0.39
CTSA-210ENST00000606000 SSH2Q76I76 1423 aa17.47■□□□□ 0.39
CTSA-210ENST00000606000 ABTB2Q8N961 1025 aa17.46■□□□□ 0.39
CTSA-210ENST00000606000 BTG4Q9NY30 223 aa17.46■□□□□ 0.39
CTSA-210ENST00000606000 CHRNA2Q15822 529 aa17.45■□□□□ 0.38
CTSA-210ENST00000606000 USP19O94966 1318 aa17.45■□□□□ 0.38
CTSA-210ENST00000606000 ATAD2Q6PL18 1390 aa17.44■□□□□ 0.38
CTSA-210ENST00000606000 ZC3H6P61129 1189 aaKnown RBP17.44■□□□□ 0.38
CTSA-210ENST00000606000 VPS72Q15906 364 aa17.44■□□□□ 0.38
CTSA-210ENST00000606000 PRDM11Q9NQV5 511 aa17.44■□□□□ 0.38
CTSA-210ENST00000606000 CCDC9Q9Y3X0 531 aaKnown RBP17.44■□□□□ 0.38
CTSA-210ENST00000606000 LMO7Q8WWI1 1683 aa17.44■□□□□ 0.38
CTSA-210ENST00000606000 CD163L1Q9NR16 1453 aa17.44■□□□□ 0.38
CTSA-210ENST00000606000 SLIT3O75094 1523 aa17.43■□□□□ 0.38
CTSA-210ENST00000606000 CPSF1Q10570 1443 aaKnown RBP17.43■□□□□ 0.38
CTSA-210ENST00000606000 ST20-MTHFSA0A0A6YYL1 179 aa17.41■□□□□ 0.38
CTSA-210ENST00000606000 TESK2Q96S53 571 aa17.41■□□□□ 0.38
CTSA-210ENST00000606000 BRD4O60885 1362 aaPredicted RBP17.4■□□□□ 0.38
CTSA-210ENST00000606000 CAMTA1Q9Y6Y1 1673 aa17.4■□□□□ 0.38
CTSA-210ENST00000606000 USP47Q96K76 1375 aa17.4■□□□□ 0.38
CTSA-210ENST00000606000 NLRP13Q86W25 1043 aa17.39■□□□□ 0.37
CTSA-210ENST00000606000 TTC21BQ7Z4L5 1316 aa17.39■□□□□ 0.37
CTSA-210ENST00000606000 KTN1Q86UP2 1357 aaKnown RBP17.39■□□□□ 0.37
CTSA-210ENST00000606000 THSD7AQ9UPZ6 1657 aa17.39■□□□□ 0.37
CTSA-210ENST00000606000 GCP02774 474 aa17.38■□□□□ 0.37
CTSA-210ENST00000606000 NLRP6P59044 892 aa17.38■□□□□ 0.37
CTSA-210ENST00000606000 SEPT12Q8IYM1 358 aa17.38■□□□□ 0.37
CTSA-210ENST00000606000 STRN4Q9NRL3 753 aa17.38■□□□□ 0.37
CTSA-210ENST00000606000 CLSPNQ9HAW4 1339 aa17.38■□□□□ 0.37
CTSA-210ENST00000606000 CPDO75976 1380 aa17.38■□□□□ 0.37
CTSA-210ENST00000606000 TMC1Q8TDI8 760 aa17.37■□□□□ 0.37
CTSA-210ENST00000606000 SLC12A5Q9H2X9 1139 aa17.37■□□□□ 0.37
CTSA-210ENST00000606000 USP54Q70EL1 1684 aa17.36■□□□□ 0.37
CTSA-210ENST00000606000 COL18A1P39060 1754 aa17.36■□□□□ 0.37
CTSA-210ENST00000606000 ZBTB7CA1YPR0 619 aa17.36■□□□□ 0.37
CTSA-210ENST00000606000 FAM98CQ17RN3 349 aaKnown RBP17.36■□□□□ 0.37
CTSA-210ENST00000606000 CCER1Q8TC90 406 aaPredicted RBP17.36■□□□□ 0.37
CTSA-210ENST00000606000 SPATA31A5Q5VU36 1347 aa17.36■□□□□ 0.37
CTSA-210ENST00000606000 SPATA31A7Q8IWB4 1347 aa17.36■□□□□ 0.37
CTSA-210ENST00000606000 A0A0G2JS52 829 aa17.35■□□□□ 0.37
CTSA-210ENST00000606000 MYT1Q01538 1121 aa17.35■□□□□ 0.37
CTSA-210ENST00000606000 ZNF692Q9BU19 519 aaPredicted RBP17.35■□□□□ 0.37
CTSA-210ENST00000606000 ZRANB1Q9UGI0 708 aa17.35■□□□□ 0.37
CTSA-210ENST00000606000 A0A1W2PP64 1363 aa17.35■□□□□ 0.37
CTSA-210ENST00000606000 RGPD5Q99666 1765 aa17.35■□□□□ 0.37
CTSA-210ENST00000606000 SOX12O15370 315 aa17.34■□□□□ 0.37
CTSA-210ENST00000606000 NFAT5O94916 1531 aa17.34■□□□□ 0.37
CTSA-210ENST00000606000 COL5A2P05997 1499 aaPredicted RBP17.34■□□□□ 0.37
CTSA-210ENST00000606000 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.34■□□□□ 0.37
CTSA-210ENST00000606000 SPATA31A1Q5TZJ5 1347 aa17.33■□□□□ 0.36
CTSA-210ENST00000606000 TTC21AQ8NDW8 1320 aa17.33■□□□□ 0.36
CTSA-210ENST00000606000 ONECUT3O60422 494 aaPredicted RBP17.33■□□□□ 0.36
CTSA-210ENST00000606000 NME9Q86XW9 330 aa17.32■□□□□ 0.36
CTSA-210ENST00000606000 MYOM1P52179 1685 aa17.32■□□□□ 0.36
CTSA-210ENST00000606000 LARP1Q6PKG0 1096 aaKnown RBP17.31■□□□□ 0.36
CTSA-210ENST00000606000 USP35Q9P2H5 1018 aa17.31■□□□□ 0.36
CTSA-210ENST00000606000 TIMELESSQ9UNS1 1208 aa17.31■□□□□ 0.36
CTSA-210ENST00000606000 EDC4Q6P2E9 1401 aaKnown RBP17.3■□□□□ 0.36
CTSA-210ENST00000606000 LTN1O94822 1766 aa17.3■□□□□ 0.36
CTSA-210ENST00000606000 WNK3Q9BYP7 1800 aa17.29■□□□□ 0.36
CTSA-210ENST00000606000 EVA1CP58658 441 aa17.29■□□□□ 0.36
CTSA-210ENST00000606000 FAM182BQ5T319 152 aa17.29■□□□□ 0.36
CTSA-210ENST00000606000 KRT27Q7Z3Y8 459 aa17.29■□□□□ 0.36
CTSA-210ENST00000606000 HDGFL2Q7Z4V5 671 aaPredicted RBP17.29■□□□□ 0.36
CTSA-210ENST00000606000 AATKQ6ZMQ8 1374 aa17.28■□□□□ 0.36
CTSA-210ENST00000606000 PUS7Q96PZ0 661 aaKnown RBP17.28■□□□□ 0.36
CTSA-210ENST00000606000 EP400Q96L91 3159 aa17.28■□□□□ 0.36
CTSA-210ENST00000606000 USP31Q70CQ4 1352 aa17.28■□□□□ 0.36
CTSA-210ENST00000606000 AXIN2Q9Y2T1 843 aa17.27■□□□□ 0.36
CTSA-210ENST00000606000 OVOS2A0A0J9YW53 1432 aa17.27■□□□□ 0.35
CTSA-210ENST00000606000 OVOS2Q6IE36 1432 aa17.27■□□□□ 0.35
CTSA-210ENST00000606000 TMF1P82094 1093 aa17.26■□□□□ 0.35
CTSA-210ENST00000606000 ARHGEF25Q86VW2 580 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms