RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 TESK2Q96S53 571 aa29.23■■■□□ 2.27
GRAMD1A-214ENST00000603907 CDK19Q9BWU1 502 aa29.23■■■□□ 2.27
GRAMD1A-214ENST00000603907 SF3B2Q13435 895 aaKnown RBP29.22■■■□□ 2.27
GRAMD1A-214ENST00000603907 RGPD8O14715 1765 aaPredicted RBP29.21■■■□□ 2.27
GRAMD1A-214ENST00000603907 TNS3Q68CZ2 1445 aa29.21■■■□□ 2.27
GRAMD1A-214ENST00000603907 NWD2Q9ULI1 1742 aa29.2■■■□□ 2.26
GRAMD1A-214ENST00000603907 PHF8Q9UPP1 1060 aa29.19■■■□□ 2.26
GRAMD1A-214ENST00000603907 PLCH1Q4KWH8 1693 aa29.18■■■□□ 2.26
GRAMD1A-214ENST00000603907 PUS7Q96PZ0 661 aaKnown RBP29.18■■■□□ 2.26
GRAMD1A-214ENST00000603907 HSPA5P11021 654 aaKnown RBP29.17■■■□□ 2.26
GRAMD1A-214ENST00000603907 SRPK2P78362 688 aaKnown RBP29.17■■■□□ 2.26
GRAMD1A-214ENST00000603907 VPS72Q15906 364 aa29.17■■■□□ 2.26
GRAMD1A-214ENST00000603907 SEPT12Q8IYM1 358 aa29.17■■■□□ 2.26
GRAMD1A-214ENST00000603907 CCDC9Q9Y3X0 531 aaKnown RBP29.16■■■□□ 2.26
GRAMD1A-214ENST00000603907 ATP7BP35670 1465 aa29.16■■■□□ 2.26
GRAMD1A-214ENST00000603907 TMF1P82094 1093 aa29.15■■■□□ 2.26
GRAMD1A-214ENST00000603907 NUDT16Q96DE0 195 aaKnown RBP29.15■■■□□ 2.26
GRAMD1A-214ENST00000603907 PRR36Q9H6K5 1346 aa29.15■■■□□ 2.26
GRAMD1A-214ENST00000603907 SBNO1A3KN83 1393 aa29.14■■■□□ 2.26
GRAMD1A-214ENST00000603907 ABCA3Q99758 1704 aa29.14■■■□□ 2.26
GRAMD1A-214ENST00000603907 DEFB132Q7Z7B7 95 aa29.14■■■□□ 2.26
GRAMD1A-214ENST00000603907 CCDC61Q9Y6R9 512 aa29.14■■■□□ 2.26
GRAMD1A-214ENST00000603907 ARHGEF10O15013 1369 aa29.13■■■□□ 2.25
GRAMD1A-214ENST00000603907 LMOD2Q6P5Q4 547 aa29.13■■■□□ 2.25
GRAMD1A-214ENST00000603907 CABLES1Q8TDN4 633 aa29.13■■■□□ 2.25
GRAMD1A-214ENST00000603907 CABP2Q9NPB3 220 aa29.13■■■□□ 2.25
GRAMD1A-214ENST00000603907 PLEKHG5O94827 1062 aa29.12■■■□□ 2.25
GRAMD1A-214ENST00000603907 CDCA8Q53HL2 280 aa29.12■■■□□ 2.25
GRAMD1A-214ENST00000603907 ITSN1Q15811 1721 aa29.11■■■□□ 2.25
GRAMD1A-214ENST00000603907 ONECUT3O60422 494 aaPredicted RBP29.1■■■□□ 2.25
GRAMD1A-214ENST00000603907 KRT27Q7Z3Y8 459 aa29.1■■■□□ 2.25
GRAMD1A-214ENST00000603907 TOPAZ1Q8N9V7 1692 aa29.06■■■□□ 2.24
GRAMD1A-214ENST00000603907 A0A0G2JS52 829 aa29.05■■■□□ 2.24
GRAMD1A-214ENST00000603907 PLEKHG3A1L390 1219 aa29.05■■■□□ 2.24
GRAMD1A-214ENST00000603907 MYT1Q01538 1121 aa29.05■■■□□ 2.24
GRAMD1A-214ENST00000603907 LRP5O75197 1615 aa29.05■■■□□ 2.24
GRAMD1A-214ENST00000603907 PPIP5K1Q6PFW1 1433 aa29.03■■■□□ 2.24
GRAMD1A-214ENST00000603907 FAM83GA6ND36 823 aa29.02■■■□□ 2.24
GRAMD1A-214ENST00000603907 BAG6P46379 1132 aa29.02■■■□□ 2.24
GRAMD1A-214ENST00000603907 PMFBP1Q8TBY8 1022 aa29.02■■■□□ 2.24
GRAMD1A-214ENST00000603907 NINLQ9Y2I6 1382 aa29.01■■■□□ 2.24
GRAMD1A-214ENST00000603907 NRAPQ86VF7 1730 aa29.01■■■□□ 2.23
GRAMD1A-214ENST00000603907 POLR3AO14802 1390 aaPredicted RBP29.01■■■□□ 2.23
GRAMD1A-214ENST00000603907 NGDNQ8NEJ9 315 aaKnown RBP28.99■■■□□ 2.23
GRAMD1A-214ENST00000603907 CABP1Q9NZU7 370 aa28.99■■■□□ 2.23
GRAMD1A-214ENST00000603907 TRPM3Q9HCF6 1732 aaPredicted RBP28.98■■■□□ 2.23
GRAMD1A-214ENST00000603907 COL14A1Q05707 1796 aaKnown RBP28.98■■■□□ 2.23
GRAMD1A-214ENST00000603907 FAM98CQ17RN3 349 aaKnown RBP28.97■■■□□ 2.23
GRAMD1A-214ENST00000603907 BTG4Q9NY30 223 aa28.96■■■□□ 2.23
GRAMD1A-214ENST00000603907 ALS2Q96Q42 1657 aa28.96■■■□□ 2.23
GRAMD1A-214ENST00000603907 ACEP12821 1306 aa28.95■■■□□ 2.23
GRAMD1A-214ENST00000603907 RGPD1P0DJD0 1748 aa28.94■■■□□ 2.22
GRAMD1A-214ENST00000603907 BRD4O60885 1362 aaPredicted RBP28.93■■■□□ 2.22
GRAMD1A-214ENST00000603907 ZNF692Q9BU19 519 aaPredicted RBP28.93■■■□□ 2.22
GRAMD1A-214ENST00000603907 TMC1Q8TDI8 760 aa28.92■■■□□ 2.22
GRAMD1A-214ENST00000603907 PSDA5PKW4 1024 aaPredicted RBP28.91■■■□□ 2.22
GRAMD1A-214ENST00000603907 CPSF1Q10570 1443 aaKnown RBP28.89■■■□□ 2.22
GRAMD1A-214ENST00000603907 SLC12A5Q9H2X9 1139 aa28.89■■■□□ 2.22
GRAMD1A-214ENST00000603907 TERF2IPQ9NYB0 399 aa28.89■■■□□ 2.22
GRAMD1A-214ENST00000603907 HDGFL2Q7Z4V5 671 aaPredicted RBP28.87■■■□□ 2.21
GRAMD1A-214ENST00000603907 C11orf95C9JLR9 678 aaPredicted RBP28.86■■■□□ 2.21
GRAMD1A-214ENST00000603907 SPATA31A5Q5VU36 1347 aa28.86■■■□□ 2.21
GRAMD1A-214ENST00000603907 SPATA31A7Q8IWB4 1347 aa28.86■■■□□ 2.21
GRAMD1A-214ENST00000603907 CRYBG1Q9Y4K1 1723 aa28.86■■■□□ 2.21
GRAMD1A-214ENST00000603907 USP6P35125 1406 aa28.86■■■□□ 2.21
GRAMD1A-214ENST00000603907 EN1Q05925 392 aaPredicted RBP28.85■■■□□ 2.21
GRAMD1A-214ENST00000603907 CD163L1Q9NR16 1453 aa28.85■■■□□ 2.21
GRAMD1A-214ENST00000603907 AKAP12Q02952 1782 aa28.84■■■□□ 2.21
GRAMD1A-214ENST00000603907 KIF7Q2M1P5 1343 aa28.84■■■□□ 2.21
GRAMD1A-214ENST00000603907 ANKRD36BQ8N2N9 1353 aa28.84■■■□□ 2.21
GRAMD1A-214ENST00000603907 THSD7AQ9UPZ6 1657 aa28.83■■■□□ 2.21
GRAMD1A-214ENST00000603907 PAK3O75914 559 aaPredicted RBP28.83■■■□□ 2.21
GRAMD1A-214ENST00000603907 PRDM11Q9NQV5 511 aa28.83■■■□□ 2.21
GRAMD1A-214ENST00000603907 KTN1Q86UP2 1357 aaKnown RBP28.82■■■□□ 2.2
GRAMD1A-214ENST00000603907 A0A1W2PP64 1363 aa28.81■■■□□ 2.2
GRAMD1A-214ENST00000603907 FAM182BQ5T319 152 aa28.81■■■□□ 2.2
GRAMD1A-214ENST00000603907 POLR3GLQ9BT43 218 aa28.81■■■□□ 2.2
GRAMD1A-214ENST00000603907 TNS1Q9HBL0 1735 aaKnown RBP28.8■■■□□ 2.2
GRAMD1A-214ENST00000603907 MYOM1P52179 1685 aa28.8■■■□□ 2.2
GRAMD1A-214ENST00000603907 DISP2A7MBM2 1401 aa28.8■■■□□ 2.2
GRAMD1A-214ENST00000603907 SSH2Q76I76 1423 aa28.8■■■□□ 2.2
GRAMD1A-214ENST00000603907 CCDC7Q96M83 1385 aa28.8■■■□□ 2.2
GRAMD1A-214ENST00000603907 MON2Q7Z3U7 1717 aa28.78■■■□□ 2.2
GRAMD1A-214ENST00000603907 TTC21AQ8NDW8 1320 aa28.77■■■□□ 2.2
GRAMD1A-214ENST00000603907 EDC4Q6P2E9 1401 aaKnown RBP28.77■■■□□ 2.2
GRAMD1A-214ENST00000603907 WASHC2AQ641Q2 1341 aa28.76■■■□□ 2.19
GRAMD1A-214ENST00000603907 R3HDM1Q15032 1099 aaKnown RBP28.76■■■□□ 2.19
GRAMD1A-214ENST00000603907 TTC21BQ7Z4L5 1316 aa28.74■■■□□ 2.19
GRAMD1A-214ENST00000603907 PHRF1Q9P1Y6 1649 aaKnown RBP28.74■■■□□ 2.19
GRAMD1A-214ENST00000603907 SPATA31A1Q5TZJ5 1347 aa28.73■■■□□ 2.19
GRAMD1A-214ENST00000603907 NRKQ7Z2Y5 1582 aa28.73■■■□□ 2.19
GRAMD1A-214ENST00000603907 KIAA0232Q92628 1395 aa28.73■■■□□ 2.19
GRAMD1A-214ENST00000603907 FAM196AQ6ZSG2 479 aa28.72■■■□□ 2.19
GRAMD1A-214ENST00000603907 EZH2Q15910 746 aaKnown RBP28.71■■■□□ 2.19
GRAMD1A-214ENST00000603907 ABTB2Q8N961 1025 aa28.71■■■□□ 2.19
GRAMD1A-214ENST00000603907 STRN4Q9NRL3 753 aa28.71■■■□□ 2.19
GRAMD1A-214ENST00000603907 CHRNA2Q15822 529 aa28.7■■■□□ 2.18
GRAMD1A-214ENST00000603907 TRIM37O94972 964 aa28.68■■■□□ 2.18
GRAMD1A-214ENST00000603907 PARD3Q8TEW0 1356 aa28.67■■■□□ 2.18
GRAMD1A-214ENST00000603907 NLRP13Q86W25 1043 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 215.6 ms