RNA–Protein interactions for RNA: ENST00000603621.1

TUBE1-204, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-204ENST00000603621 POLR3AO14802 1390 aaPredicted RBP20.4■□□□□ 0.86
TUBE1-204ENST00000603621 NUTM2GQ5VZR2 741 aa20.38■□□□□ 0.85
TUBE1-204ENST00000603621 FNBP4Q8N3X1 1017 aaPredicted RBP20.38■□□□□ 0.85
TUBE1-204ENST00000603621 TIMELESSQ9UNS1 1208 aa20.36■□□□□ 0.85
TUBE1-204ENST00000603621 ST20-MTHFSA0A0A6YYL1 179 aa20.35■□□□□ 0.85
TUBE1-204ENST00000603621 TRPC5Q9UL62 973 aaPredicted RBP20.35■□□□□ 0.85
TUBE1-204ENST00000603621 SBNO2Q9Y2G9 1366 aa20.34■□□□□ 0.85
TUBE1-204ENST00000603621 RBM6P78332 1123 aaKnown RBP20.34■□□□□ 0.85
TUBE1-204ENST00000603621 ABTB2Q8N961 1025 aa20.34■□□□□ 0.85
TUBE1-204ENST00000603621 CRYBG1Q9Y4K1 1723 aa20.33■□□□□ 0.84
TUBE1-204ENST00000603621 BCL9LQ86UU0 1499 aa20.32■□□□□ 0.84
TUBE1-204ENST00000603621 ATAD2Q6PL18 1390 aa20.32■□□□□ 0.84
TUBE1-204ENST00000603621 PLCH1Q4KWH8 1693 aa20.32■□□□□ 0.84
TUBE1-204ENST00000603621 FAM83GA6ND36 823 aa20.31■□□□□ 0.84
TUBE1-204ENST00000603621 TMC1Q8TDI8 760 aa20.31■□□□□ 0.84
TUBE1-204ENST00000603621 UNC5CLQ8IV45 518 aa20.3■□□□□ 0.84
TUBE1-204ENST00000603621 SLIT2O94813 1529 aa20.3■□□□□ 0.84
TUBE1-204ENST00000603621 AKAP12Q02952 1782 aa20.3■□□□□ 0.84
TUBE1-204ENST00000603621 PHRF1Q9P1Y6 1649 aaKnown RBP20.3■□□□□ 0.84
TUBE1-204ENST00000603621 ATRNO75882 1429 aa20.29■□□□□ 0.84
TUBE1-204ENST00000603621 USP6P35125 1406 aa20.29■□□□□ 0.84
TUBE1-204ENST00000603621 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.29■□□□□ 0.84
TUBE1-204ENST00000603621 USP47Q96K76 1375 aa20.29■□□□□ 0.84
TUBE1-204ENST00000603621 ZC3H6P61129 1189 aaKnown RBP20.27■□□□□ 0.84
TUBE1-204ENST00000603621 TESK2Q96S53 571 aa20.27■□□□□ 0.84
TUBE1-204ENST00000603621 NWD2Q9ULI1 1742 aa20.27■□□□□ 0.83
TUBE1-204ENST00000603621 NLRP13Q86W25 1043 aa20.26■□□□□ 0.83
TUBE1-204ENST00000603621 ZNF692Q9BU19 519 aaPredicted RBP20.26■□□□□ 0.83
TUBE1-204ENST00000603621 PRDM11Q9NQV5 511 aa20.26■□□□□ 0.83
TUBE1-204ENST00000603621 BTG4Q9NY30 223 aa20.26■□□□□ 0.83
TUBE1-204ENST00000603621 CCDC9Q9Y3X0 531 aaKnown RBP20.26■□□□□ 0.83
TUBE1-204ENST00000603621 RGS12O14924 1447 aa20.26■□□□□ 0.83
TUBE1-204ENST00000603621 COL14A1Q05707 1796 aaKnown RBP20.26■□□□□ 0.83
TUBE1-204ENST00000603621 CDK12Q9NYV4 1490 aaPredicted RBP20.25■□□□□ 0.83
TUBE1-204ENST00000603621 BRD4O60885 1362 aaPredicted RBP20.25■□□□□ 0.83
TUBE1-204ENST00000603621 NLRP6P59044 892 aa20.25■□□□□ 0.83
TUBE1-204ENST00000603621 GJD4Q96KN9 370 aaPredicted RBP20.25■□□□□ 0.83
TUBE1-204ENST00000603621 SLC12A5Q9H2X9 1139 aa20.25■□□□□ 0.83
TUBE1-204ENST00000603621 KTN1Q86UP2 1357 aaKnown RBP20.24■□□□□ 0.83
TUBE1-204ENST00000603621 CHRNA2Q15822 529 aa20.24■□□□□ 0.83
TUBE1-204ENST00000603621 KIAA0232Q92628 1395 aa20.23■□□□□ 0.83
TUBE1-204ENST00000603621 TTC21BQ7Z4L5 1316 aa20.23■□□□□ 0.83
TUBE1-204ENST00000603621 MON2Q7Z3U7 1717 aa20.22■□□□□ 0.83
TUBE1-204ENST00000603621 CPSF1Q10570 1443 aaKnown RBP20.22■□□□□ 0.83
TUBE1-204ENST00000603621 SLC24A1O60721 1099 aa20.22■□□□□ 0.83
TUBE1-204ENST00000603621 PIK3C2AO00443 1686 aa20.22■□□□□ 0.83
TUBE1-204ENST00000603621 NRKQ7Z2Y5 1582 aa20.21■□□□□ 0.83
TUBE1-204ENST00000603621 SSH2Q76I76 1423 aa20.21■□□□□ 0.83
TUBE1-204ENST00000603621 ZBTB7CA1YPR0 619 aa20.21■□□□□ 0.83
TUBE1-204ENST00000603621 TMF1P82094 1093 aa20.21■□□□□ 0.83
TUBE1-204ENST00000603621 HDGFL2Q7Z4V5 671 aaPredicted RBP20.21■□□□□ 0.83
TUBE1-204ENST00000603621 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.21■□□□□ 0.83
TUBE1-204ENST00000603621 NRAPQ86VF7 1730 aa20.21■□□□□ 0.83
TUBE1-204ENST00000603621 USP19O94966 1318 aa20.21■□□□□ 0.83
TUBE1-204ENST00000603621 GLI3P10071 1580 aa20.21■□□□□ 0.83
TUBE1-204ENST00000603621 GCP02774 474 aa20.2■□□□□ 0.82
TUBE1-204ENST00000603621 VPS72Q15906 364 aa20.2■□□□□ 0.82
TUBE1-204ENST00000603621 PUS7Q96PZ0 661 aaKnown RBP20.2■□□□□ 0.82
TUBE1-204ENST00000603621 CD163L1Q9NR16 1453 aa20.18■□□□□ 0.82
TUBE1-204ENST00000603621 SOX12O15370 315 aa20.18■□□□□ 0.82
TUBE1-204ENST00000603621 STRN4Q9NRL3 753 aa20.18■□□□□ 0.82
TUBE1-204ENST00000603621 TERF2IPQ9NYB0 399 aa20.18■□□□□ 0.82
TUBE1-204ENST00000603621 TTC21AQ8NDW8 1320 aa20.18■□□□□ 0.82
TUBE1-204ENST00000603621 A0A1W2PP64 1363 aa20.16■□□□□ 0.82
TUBE1-204ENST00000603621 A0A0G2JS52 829 aa20.15■□□□□ 0.82
TUBE1-204ENST00000603621 EVA1CP58658 441 aa20.15■□□□□ 0.82
TUBE1-204ENST00000603621 MYT1Q01538 1121 aa20.15■□□□□ 0.82
TUBE1-204ENST00000603621 ZRANB1Q9UGI0 708 aa20.15■□□□□ 0.82
TUBE1-204ENST00000603621 BRWD3Q6RI45 1802 aa20.14■□□□□ 0.81
TUBE1-204ENST00000603621 SLIT3O75094 1523 aa20.14■□□□□ 0.81
TUBE1-204ENST00000603621 NME9Q86XW9 330 aa20.14■□□□□ 0.81
TUBE1-204ENST00000603621 CPDO75976 1380 aa20.13■□□□□ 0.81
TUBE1-204ENST00000603621 CDCA8Q53HL2 280 aa20.13■□□□□ 0.81
TUBE1-204ENST00000603621 UPF1Q92900 1129 aaKnown RBP eCLIP20.13■□□□□ 0.81
TUBE1-204ENST00000603621 NINLQ9Y2I6 1382 aa20.12■□□□□ 0.81
TUBE1-204ENST00000603621 FAM98CQ17RN3 349 aaKnown RBP20.12■□□□□ 0.81
TUBE1-204ENST00000603621 SEPT12Q8IYM1 358 aa20.12■□□□□ 0.81
TUBE1-204ENST00000603621 EDC4Q6P2E9 1401 aaKnown RBP20.11■□□□□ 0.81
TUBE1-204ENST00000603621 CAMTA1Q9Y6Y1 1673 aa20.11■□□□□ 0.81
TUBE1-204ENST00000603621 EIF4G2P78344 907 aaKnown RBP eCLIP20.11■□□□□ 0.81
TUBE1-204ENST00000603621 KCNH5Q8NCM2 988 aa20.11■□□□□ 0.81
TUBE1-204ENST00000603621 POLR3GLQ9BT43 218 aa20.11■□□□□ 0.81
TUBE1-204ENST00000603621 LMO7Q8WWI1 1683 aa20.1■□□□□ 0.81
TUBE1-204ENST00000603621 SPATA31A5Q5VU36 1347 aa20.1■□□□□ 0.81
TUBE1-204ENST00000603621 SPATA31A7Q8IWB4 1347 aa20.1■□□□□ 0.81
TUBE1-204ENST00000603621 HSPA5P11021 654 aaKnown RBP20.1■□□□□ 0.81
TUBE1-204ENST00000603621 USP35Q9P2H5 1018 aa20.1■□□□□ 0.81
TUBE1-204ENST00000603621 RGPD5Q99666 1765 aa20.08■□□□□ 0.81
TUBE1-204ENST00000603621 LARP1Q6PKG0 1096 aaKnown RBP20.07■□□□□ 0.8
TUBE1-204ENST00000603621 USP31Q70CQ4 1352 aa20.07■□□□□ 0.8
TUBE1-204ENST00000603621 ANKRD36BQ8N2N9 1353 aa20.07■□□□□ 0.8
TUBE1-204ENST00000603621 SPATA31A1Q5TZJ5 1347 aa20.06■□□□□ 0.8
TUBE1-204ENST00000603621 ONECUT3O60422 494 aaPredicted RBP20.06■□□□□ 0.8
TUBE1-204ENST00000603621 AATKQ6ZMQ8 1374 aa20.06■□□□□ 0.8
TUBE1-204ENST00000603621 COL18A1P39060 1754 aa20.06■□□□□ 0.8
TUBE1-204ENST00000603621 ARHGEF25Q86VW2 580 aa20.05■□□□□ 0.8
TUBE1-204ENST00000603621 USP54Q70EL1 1684 aa20.05■□□□□ 0.8
TUBE1-204ENST00000603621 NFAT5O94916 1531 aa20.04■□□□□ 0.8
TUBE1-204ENST00000603621 KRT27Q7Z3Y8 459 aa20.04■□□□□ 0.8
TUBE1-204ENST00000603621 AXIN2Q9Y2T1 843 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms