RNA–Protein interactions for RNA: ENST00000602698.5

HCG18-247, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 573 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-247ENST00000602698 NGDNQ8NEJ9 315 aaKnown RBP13.86□□□□□ -0.19
HCG18-247ENST00000602698 NUDT16Q96DE0 195 aaKnown RBP13.86□□□□□ -0.19
HCG18-247ENST00000602698 CDK19Q9BWU1 502 aa13.85□□□□□ -0.19
HCG18-247ENST00000602698 POLR3AO14802 1390 aaPredicted RBP13.84□□□□□ -0.19
HCG18-247ENST00000602698 VPS72Q15906 364 aa13.84□□□□□ -0.19
HCG18-247ENST00000602698 FAM83GA6ND36 823 aa13.83□□□□□ -0.2
HCG18-247ENST00000602698 PAK3O75914 559 aaPredicted RBP13.83□□□□□ -0.2
HCG18-247ENST00000602698 L3MBTL2Q969R5 705 aa13.82□□□□□ -0.2
HCG18-247ENST00000602698 NRKQ7Z2Y5 1582 aa13.82□□□□□ -0.2
HCG18-247ENST00000602698 CENPJQ9HC77 1338 aaPredicted RBP13.82□□□□□ -0.2
HCG18-247ENST00000602698 SIN3AQ96ST3 1273 aa13.81□□□□□ -0.2
HCG18-247ENST00000602698 CCDC61Q9Y6R9 512 aa13.81□□□□□ -0.2
HCG18-247ENST00000602698 ACEP12821 1306 aa13.81□□□□□ -0.2
HCG18-247ENST00000602698 PLEKHG3A1L390 1219 aa13.8□□□□□ -0.2
HCG18-247ENST00000602698 CCDC9Q9Y3X0 531 aaKnown RBP13.8□□□□□ -0.2
HCG18-247ENST00000602698 PPIP5K1Q6PFW1 1433 aa13.8□□□□□ -0.2
HCG18-247ENST00000602698 THSD7AQ9UPZ6 1657 aa13.79□□□□□ -0.2
HCG18-247ENST00000602698 ONECUT3O60422 494 aaPredicted RBP13.79□□□□□ -0.2
HCG18-247ENST00000602698 SEPT12Q8IYM1 358 aa13.79□□□□□ -0.2
HCG18-247ENST00000602698 BTG4Q9NY30 223 aa13.79□□□□□ -0.2
HCG18-247ENST00000602698 SRCAPQ6ZRS2 3230 aa13.79□□□□□ -0.2
HCG18-247ENST00000602698 AKAP12Q02952 1782 aa13.78□□□□□ -0.2
HCG18-247ENST00000602698 NBPF8Q3BBV2 869 aa13.78□□□□□ -0.2
HCG18-247ENST00000602698 CCDC125Q86Z20 511 aa13.78□□□□□ -0.2
HCG18-247ENST00000602698 BLMP54132 1417 aaPredicted RBP13.78□□□□□ -0.2
HCG18-247ENST00000602698 LMO7Q8WWI1 1683 aa13.78□□□□□ -0.2
HCG18-247ENST00000602698 SRPK2P78362 688 aaKnown RBP13.77□□□□□ -0.21
HCG18-247ENST00000602698 KIAA0232Q92628 1395 aa13.77□□□□□ -0.21
HCG18-247ENST00000602698 PRDM11Q9NQV5 511 aa13.77□□□□□ -0.21
HCG18-247ENST00000602698 ROCK2O75116 1388 aaKnown RBP13.76□□□□□ -0.21
HCG18-247ENST00000602698 NEUROD1Q13562 356 aa13.76□□□□□ -0.21
HCG18-247ENST00000602698 CABP2Q9NPB3 220 aa13.76□□□□□ -0.21
HCG18-247ENST00000602698 RGPD1P0DJD0 1748 aa13.76□□□□□ -0.21
HCG18-247ENST00000602698 PIK3C2AO00443 1686 aa13.75□□□□□ -0.21
HCG18-247ENST00000602698 SPATA31A5Q5VU36 1347 aa13.75□□□□□ -0.21
HCG18-247ENST00000602698 SPATA31A7Q8IWB4 1347 aa13.75□□□□□ -0.21
HCG18-247ENST00000602698 NUTM2GQ5VZR2 741 aa13.75□□□□□ -0.21
HCG18-247ENST00000602698 BRD4O60885 1362 aaPredicted RBP13.74□□□□□ -0.21
HCG18-247ENST00000602698 USP19O94966 1318 aa13.74□□□□□ -0.21
HCG18-247ENST00000602698 FAM98CQ17RN3 349 aaKnown RBP13.74□□□□□ -0.21
HCG18-247ENST00000602698 KRT27Q7Z3Y8 459 aa13.74□□□□□ -0.21
HCG18-247ENST00000602698 USP6P35125 1406 aa13.73□□□□□ -0.21
HCG18-247ENST00000602698 TNS1Q9HBL0 1735 aaKnown RBP13.73□□□□□ -0.21
HCG18-247ENST00000602698 A0A0G2JS52 829 aa13.73□□□□□ -0.21
HCG18-247ENST00000602698 MYT1Q01538 1121 aa13.73□□□□□ -0.21
HCG18-247ENST00000602698 CHRNA2Q15822 529 aa13.73□□□□□ -0.21
HCG18-247ENST00000602698 ABTB2Q8N961 1025 aa13.73□□□□□ -0.21
HCG18-247ENST00000602698 MON2Q7Z3U7 1717 aa13.73□□□□□ -0.21
HCG18-247ENST00000602698 CAMTA1Q9Y6Y1 1673 aa13.72□□□□□ -0.21
HCG18-247ENST00000602698 CPDO75976 1380 aa13.72□□□□□ -0.21
HCG18-247ENST00000602698 EVC2Q86UK5 1308 aa13.72□□□□□ -0.21
HCG18-247ENST00000602698 ZC3H6P61129 1189 aaKnown RBP13.72□□□□□ -0.21
HCG18-247ENST00000602698 PIAS4Q8N2W9 510 aaPredicted RBP13.72□□□□□ -0.21
HCG18-247ENST00000602698 SLIT3O75094 1523 aa13.72□□□□□ -0.21
HCG18-247ENST00000602698 SPATA31A1Q5TZJ5 1347 aa13.71□□□□□ -0.21
HCG18-247ENST00000602698 CABP1Q9NZU7 370 aa13.71□□□□□ -0.21
HCG18-247ENST00000602698 SSH2Q76I76 1423 aa13.71□□□□□ -0.22
HCG18-247ENST00000602698 WNK3Q9BYP7 1800 aa13.7□□□□□ -0.22
HCG18-247ENST00000602698 COL18A1P39060 1754 aa13.7□□□□□ -0.22
HCG18-247ENST00000602698 RGPD5Q99666 1765 aa13.7□□□□□ -0.22
HCG18-247ENST00000602698 SF3B2Q13435 895 aaKnown RBP13.69□□□□□ -0.22
HCG18-247ENST00000602698 DEFB132Q7Z7B7 95 aa13.69□□□□□ -0.22
HCG18-247ENST00000602698 NLRP13Q86W25 1043 aa13.69□□□□□ -0.22
HCG18-247ENST00000602698 STRN4Q9NRL3 753 aa13.69□□□□□ -0.22
HCG18-247ENST00000602698 ZRANB1Q9UGI0 708 aa13.69□□□□□ -0.22
HCG18-247ENST00000602698 PARP4Q9UKK3 1724 aaKnown RBP13.69□□□□□ -0.22
HCG18-247ENST00000602698 USP54Q70EL1 1684 aa13.68□□□□□ -0.22
HCG18-247ENST00000602698 SBNO2Q9Y2G9 1366 aa13.68□□□□□ -0.22
HCG18-247ENST00000602698 COL5A2P05997 1499 aaPredicted RBP13.67□□□□□ -0.22
HCG18-247ENST00000602698 GCP02774 474 aa13.67□□□□□ -0.22
HCG18-247ENST00000602698 TONSLQ96HA7 1378 aa13.67□□□□□ -0.22
HCG18-247ENST00000602698 CPSF1Q10570 1443 aaKnown RBP13.65□□□□□ -0.22
HCG18-247ENST00000602698 EVA1CP58658 441 aa13.65□□□□□ -0.22
HCG18-247ENST00000602698 NLRP6P59044 892 aa13.65□□□□□ -0.22
HCG18-247ENST00000602698 FAM182BQ5T319 152 aa13.65□□□□□ -0.22
HCG18-247ENST00000602698 LARP1Q6PKG0 1096 aaKnown RBP13.65□□□□□ -0.22
HCG18-247ENST00000602698 DISP2A7MBM2 1401 aa13.64□□□□□ -0.23
HCG18-247ENST00000602698 BARGINQ6ZT62 677 aa13.64□□□□□ -0.23
HCG18-247ENST00000602698 CARD11Q9BXL7 1154 aa13.64□□□□□ -0.23
HCG18-247ENST00000602698 USP35Q9P2H5 1018 aa13.64□□□□□ -0.23
HCG18-247ENST00000602698 LRRC37A3O60309 1634 aa13.64□□□□□ -0.23
HCG18-247ENST00000602698 LTN1O94822 1766 aa13.63□□□□□ -0.23
HCG18-247ENST00000602698 AATKQ6ZMQ8 1374 aa13.63□□□□□ -0.23
HCG18-247ENST00000602698 SBF2Q86WG5 1849 aa13.63□□□□□ -0.23
HCG18-247ENST00000602698 BAG6P46379 1132 aa13.63□□□□□ -0.23
HCG18-247ENST00000602698 ZNF692Q9BU19 519 aaPredicted RBP13.63□□□□□ -0.23
HCG18-247ENST00000602698 NFAT5O94916 1531 aa13.63□□□□□ -0.23
HCG18-247ENST00000602698 TTC21BQ7Z4L5 1316 aa13.63□□□□□ -0.23
HCG18-247ENST00000602698 TTC21AQ8NDW8 1320 aa13.63□□□□□ -0.23
HCG18-247ENST00000602698 KTN1Q86UP2 1357 aaKnown RBP13.62□□□□□ -0.23
HCG18-247ENST00000602698 TCP11L2Q8N4U5 519 aa13.62□□□□□ -0.23
HCG18-247ENST00000602698 CRB1P82279 1406 aa13.62□□□□□ -0.23
HCG18-247ENST00000602698 RREB1Q92766 1687 aa13.62□□□□□ -0.23
HCG18-247ENST00000602698 PEAK1Q9H792 1746 aa13.61□□□□□ -0.23
HCG18-247ENST00000602698 CD163L1Q9NR16 1453 aa13.61□□□□□ -0.23
HCG18-247ENST00000602698 LRP5O75197 1615 aa13.61□□□□□ -0.23
HCG18-247ENST00000602698 ABCC6O95255 1503 aa13.61□□□□□ -0.23
HCG18-247ENST00000602698 TRIM26Q12899 539 aaPredicted RBP13.61□□□□□ -0.23
HCG18-247ENST00000602698 THRAP3Q9Y2W1 955 aaKnown RBP13.61□□□□□ -0.23
HCG18-247ENST00000602698 ZBTB7CA1YPR0 619 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms