RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 C6orf229H3BNL8 230 aa6.92□□□□□ -1.3
SGMS1-207ENST00000602619 GDF11O95390 407 aa6.92□□□□□ -1.3
SGMS1-207ENST00000602619 ADH1CP00326 375 aa6.92□□□□□ -1.3
SGMS1-207ENST00000602619 ZNF511Q8NB15 262 aa6.92□□□□□ -1.3
SGMS1-207ENST00000602619 FDX1P10109 184 aa6.91□□□□□ -1.3
SGMS1-207ENST00000602619 KCNH2Q12809 1159 aa6.91□□□□□ -1.3
SGMS1-207ENST00000602619 PTPRNQ16849 979 aa6.91□□□□□ -1.3
SGMS1-207ENST00000602619 NUTM1Q86Y26 1132 aa6.91□□□□□ -1.3
SGMS1-207ENST00000602619 FAM217BQ9NTX9 383 aaPredicted RBP6.91□□□□□ -1.3
SGMS1-207ENST00000602619 MAN1A2O60476 641 aa6.9□□□□□ -1.3
SGMS1-207ENST00000602619 KRT76Q01546 638 aa6.9□□□□□ -1.3
SGMS1-207ENST00000602619 C6orf118Q5T5N4 469 aa6.89□□□□□ -1.31
SGMS1-207ENST00000602619 GPR161Q8N6U8 529 aaKnown RBP6.89□□□□□ -1.31
SGMS1-207ENST00000602619 ZFAND3Q9H8U3 227 aa6.89□□□□□ -1.31
SGMS1-207ENST00000602619 ADAMTS8Q9UP79 889 aa6.89□□□□□ -1.31
SGMS1-207ENST00000602619 ZIC2O95409 532 aaPredicted RBP6.88□□□□□ -1.31
SGMS1-207ENST00000602619 ITPKCQ96DU7 683 aa6.88□□□□□ -1.31
SGMS1-207ENST00000602619 CDK15Q96Q40 435 aa6.88□□□□□ -1.31
SGMS1-207ENST00000602619 GPCPD1Q9NPB8 672 aa6.88□□□□□ -1.31
SGMS1-207ENST00000602619 MINK1Q8N4C8 1332 aaPredicted RBP6.87□□□□□ -1.31
SGMS1-207ENST00000602619 PRR7Q8TB68 274 aa6.87□□□□□ -1.31
SGMS1-207ENST00000602619 NR3C2P08235 984 aa6.86□□□□□ -1.31
SGMS1-207ENST00000602619 NDUFV2P19404 249 aa6.86□□□□□ -1.31
SGMS1-207ENST00000602619 CLCN1P35523 988 aa6.86□□□□□ -1.31
SGMS1-207ENST00000602619 FAM174AQ8TBP5 190 aa6.86□□□□□ -1.31
SGMS1-207ENST00000602619 CNTNAP3BQ96NU0 1288 aa6.86□□□□□ -1.31
SGMS1-207ENST00000602619 CNTNAP3Q9BZ76 1288 aa6.86□□□□□ -1.31
SGMS1-207ENST00000602619 BMP2P12643 396 aa6.85□□□□□ -1.31
SGMS1-207ENST00000602619 ARID5BQ14865 1188 aa6.85□□□□□ -1.31
SGMS1-207ENST00000602619 SPIRE2Q8WWL2 714 aa6.85□□□□□ -1.31
SGMS1-207ENST00000602619 FOXJ1Q92949 421 aa6.85□□□□□ -1.31
SGMS1-207ENST00000602619 CCDC102AQ96A19 550 aa6.85□□□□□ -1.31
SGMS1-207ENST00000602619 DNMT3LQ9UJW3 386 aa6.85□□□□□ -1.31
SGMS1-207ENST00000602619 SOS2Q07890 1332 aaPredicted RBP6.84□□□□□ -1.31
SGMS1-207ENST00000602619 GRM5P41594 1212 aa6.84□□□□□ -1.31
SGMS1-207ENST00000602619 DESI1Q6ICB0 168 aa6.84□□□□□ -1.31
SGMS1-207ENST00000602619 MOXD2PA6NHM9 499 aa6.83□□□□□ -1.32
SGMS1-207ENST00000602619 RNF225M0QZC1 329 aaPredicted RBP6.83□□□□□ -1.32
SGMS1-207ENST00000602619 NR5A1Q13285 461 aa6.83□□□□□ -1.32
SGMS1-207ENST00000602619 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.83□□□□□ -1.32
SGMS1-207ENST00000602619 LINC00528Q8N1L1 170 aa6.83□□□□□ -1.32
SGMS1-207ENST00000602619 CTHP32929 405 aa6.82□□□□□ -1.32
SGMS1-207ENST00000602619 ZNF385CQ66K41 422 aaPredicted RBP6.82□□□□□ -1.32
SGMS1-207ENST00000602619 UPP2O95045 317 aa6.81□□□□□ -1.32
SGMS1-207ENST00000602619 MTMR2Q13614 643 aa6.81□□□□□ -1.32
SGMS1-207ENST00000602619 C4orf48Q5BLP8 95 aa6.81□□□□□ -1.32
SGMS1-207ENST00000602619 GPAT2Q6NUI2 795 aa6.81□□□□□ -1.32
SGMS1-207ENST00000602619 LYPD8Q6UX82 237 aa6.81□□□□□ -1.32
SGMS1-207ENST00000602619 COL25A1Q9BXS0 654 aaPredicted RBP6.81□□□□□ -1.32
SGMS1-207ENST00000602619 SSTR3P32745 418 aaPredicted RBP6.8□□□□□ -1.32
SGMS1-207ENST00000602619 RNFT1Q5M7Z0 435 aa6.8□□□□□ -1.32
SGMS1-207ENST00000602619 MEIOBQ8N635 442 aa6.8□□□□□ -1.32
SGMS1-207ENST00000602619 SPDYE5A6NIY4 337 aa6.79□□□□□ -1.32
SGMS1-207ENST00000602619 TULP1O00294 542 aaPredicted RBP6.79□□□□□ -1.32
SGMS1-207ENST00000602619 SPTLC1O15269 473 aa6.79□□□□□ -1.32
SGMS1-207ENST00000602619 IRS1P35568 1242 aa6.79□□□□□ -1.32
SGMS1-207ENST00000602619 PTSQ03393 145 aa6.79□□□□□ -1.32
SGMS1-207ENST00000602619 KRI1Q8N9T8 703 aaKnown RBP6.79□□□□□ -1.32
SGMS1-207ENST00000602619 WHAMMQ8TF30 809 aa6.79□□□□□ -1.32
SGMS1-207ENST00000602619 NANOS1Q8WY41 292 aaKnown RBP6.79□□□□□ -1.32
SGMS1-207ENST00000602619 DNMT3AQ9Y6K1 912 aaPredicted RBP6.79□□□□□ -1.32
SGMS1-207ENST00000602619 ARHGEF15O94989 841 aa6.78□□□□□ -1.32
SGMS1-207ENST00000602619 IGHA1P01876 353 aa6.78□□□□□ -1.32
SGMS1-207ENST00000602619 SVOPQ8N4V2 548 aa6.78□□□□□ -1.32
SGMS1-207ENST00000602619 F12P00748 615 aaPredicted RBP6.77□□□□□ -1.33
SGMS1-207ENST00000602619 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.77□□□□□ -1.33
SGMS1-207ENST00000602619 MAP10Q9P2G4 905 aa6.77□□□□□ -1.33
SGMS1-207ENST00000602619 CFAP99D6REC4 459 aa6.76□□□□□ -1.33
SGMS1-207ENST00000602619 SLURP2P0DP57 97 aa6.76□□□□□ -1.33
SGMS1-207ENST00000602619 AGERQ15109 404 aa6.76□□□□□ -1.33
SGMS1-207ENST00000602619 TSEN34Q9BSV6 310 aaKnown RBP6.76□□□□□ -1.33
SGMS1-207ENST00000602619 FIGNL2A6NMB9 653 aa6.75□□□□□ -1.33
SGMS1-207ENST00000602619 TTLL8A6PVC2 850 aa6.75□□□□□ -1.33
SGMS1-207ENST00000602619 XP32Q5T750 250 aa6.75□□□□□ -1.33
SGMS1-207ENST00000602619 CCDC155Q8N6L0 562 aa6.75□□□□□ -1.33
SGMS1-207ENST00000602619 PCDHB15Q9Y5E8 787 aa6.75□□□□□ -1.33
SGMS1-207ENST00000602619 BPHLQ86WA6 291 aaPredicted RBP6.74□□□□□ -1.33
SGMS1-207ENST00000602619 MARSP56192 900 aaKnown RBP6.73□□□□□ -1.33
SGMS1-207ENST00000602619 KANK3Q6NY19 840 aa6.73□□□□□ -1.33
SGMS1-207ENST00000602619 VWA5B2Q8N398 1253 aa6.73□□□□□ -1.33
SGMS1-207ENST00000602619 SLC35F4A4IF30 521 aa6.72□□□□□ -1.33
SGMS1-207ENST00000602619 PER1O15534 1290 aaPredicted RBP6.72□□□□□ -1.33
SGMS1-207ENST00000602619 FSHRP23945 695 aa6.72□□□□□ -1.33
SGMS1-207ENST00000602619 FOXK2Q01167 660 aa6.72□□□□□ -1.33
SGMS1-207ENST00000602619 C1QTNF2Q9BXJ5 285 aa6.72□□□□□ -1.33
SGMS1-207ENST00000602619 HRCP23327 699 aa6.71□□□□□ -1.34
SGMS1-207ENST00000602619 GJA5P36382 358 aa6.71□□□□□ -1.34
SGMS1-207ENST00000602619 RSBN1LQ6PCB5 846 aaPredicted RBP6.71□□□□□ -1.34
SGMS1-207ENST00000602619 SH3RF1Q7Z6J0 888 aa6.71□□□□□ -1.34
SGMS1-207ENST00000602619 ZC3H15Q8WU90 426 aaKnown RBP6.71□□□□□ -1.34
SGMS1-207ENST00000602619 EMILIN1Q9Y6C2 1016 aa6.71□□□□□ -1.34
SGMS1-207ENST00000602619 ZMYND10O75800 440 aa6.7□□□□□ -1.34
SGMS1-207ENST00000602619 ITGA6P23229 1130 aa6.7□□□□□ -1.34
SGMS1-207ENST00000602619 CBLBQ13191 982 aa6.7□□□□□ -1.34
SGMS1-207ENST00000602619 LYPD4Q6UWN0 246 aa6.7□□□□□ -1.34
SGMS1-207ENST00000602619 VASH1Q7L8A9 365 aaPredicted RBP6.7□□□□□ -1.34
SGMS1-207ENST00000602619 CCDC116Q8IYX3 515 aa6.7□□□□□ -1.34
SGMS1-207ENST00000602619 SCARF2Q96GP6 870 aaPredicted RBP6.7□□□□□ -1.34
SGMS1-207ENST00000602619 TBC1D2Q9BYX2 928 aa6.7□□□□□ -1.34
SGMS1-207ENST00000602619 MAP4K5Q9Y4K4 846 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms