RNA–Protein interactions for RNA: ENST00000599964.1

COPE-209, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 4

Gene COPE, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-209ENST00000599964 COL16A1Q07092 1604 aaPredicted RBP26.17■■□□□ 1.78
COPE-209ENST00000599964 HSPA1LP34931 641 aa26.16■■□□□ 1.78
COPE-209ENST00000599964 TRPM3Q9HCF6 1732 aaPredicted RBP26.16■■□□□ 1.78
COPE-209ENST00000599964 TTC21AQ8NDW8 1320 aa26.15■■□□□ 1.78
COPE-209ENST00000599964 TNS3Q68CZ2 1445 aa26.15■■□□□ 1.78
COPE-209ENST00000599964 SPATA31A3Q5VYP0 1347 aa26.14■■□□□ 1.78
COPE-209ENST00000599964 ARHGEF10O15013 1369 aa26.14■■□□□ 1.78
COPE-209ENST00000599964 NRKQ7Z2Y5 1582 aa26.14■■□□□ 1.78
COPE-209ENST00000599964 SSH2Q76I76 1423 aa26.14■■□□□ 1.77
COPE-209ENST00000599964 TTC21BQ7Z4L5 1316 aa26.14■■□□□ 1.77
COPE-209ENST00000599964 LMOD2Q6P5Q4 547 aa26.13■■□□□ 1.77
COPE-209ENST00000599964 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.11■■□□□ 1.77
COPE-209ENST00000599964 ABTB2Q8N961 1025 aa26.11■■□□□ 1.77
COPE-209ENST00000599964 NSD3Q9BZ95 1437 aa26.11■■□□□ 1.77
COPE-209ENST00000599964 CARD14Q9BXL6 1004 aa26.1■■□□□ 1.77
COPE-209ENST00000599964 KNSTRNQ9Y448 316 aa26.1■■□□□ 1.77
COPE-209ENST00000599964 ALS2Q96Q42 1657 aa26.09■■□□□ 1.77
COPE-209ENST00000599964 JCADQ9P266 1359 aa26.08■■□□□ 1.77
COPE-209ENST00000599964 CGNL1Q0VF96 1302 aa26.08■■□□□ 1.77
COPE-209ENST00000599964 DDX10Q13206 875 aaKnown RBP26.07■■□□□ 1.76
COPE-209ENST00000599964 NLRP13Q86W25 1043 aa26.06■■□□□ 1.76
COPE-209ENST00000599964 SHPRHQ149N8 1683 aa26.05■■□□□ 1.76
COPE-209ENST00000599964 PNPLA6Q8IY17 1366 aa26.05■■□□□ 1.76
COPE-209ENST00000599964 NLRP6P59044 892 aa26.04■■□□□ 1.76
COPE-209ENST00000599964 PIK3C2AO00443 1686 aa26.03■■□□□ 1.76
COPE-209ENST00000599964 KIF20BQ96Q89 1820 aa26.02■■□□□ 1.76
COPE-209ENST00000599964 NME9Q86XW9 330 aa26.02■■□□□ 1.76
COPE-209ENST00000599964 COL22A1Q8NFW1 1626 aaPredicted RBP26.02■■□□□ 1.76
COPE-209ENST00000599964 PER1O15534 1290 aaPredicted RBP26.01■■□□□ 1.75
COPE-209ENST00000599964 NSD2O96028 1365 aa26.01■■□□□ 1.75
COPE-209ENST00000599964 USP31Q70CQ4 1352 aa26.01■■□□□ 1.75
COPE-209ENST00000599964 FYB1O15117 783 aa26■■□□□ 1.75
COPE-209ENST00000599964 NUTM2GQ5VZR2 741 aa26■■□□□ 1.75
COPE-209ENST00000599964 COG3Q96JB2 828 aa26■■□□□ 1.75
COPE-209ENST00000599964 MED1Q15648 1581 aaPredicted RBP25.99■■□□□ 1.75
COPE-209ENST00000599964 SPATA31A6Q5VVP1 1343 aa25.99■■□□□ 1.75
COPE-209ENST00000599964 HAP1P54257 671 aaPredicted RBP25.99■■□□□ 1.75
COPE-209ENST00000599964 USP54Q70EL1 1684 aa25.97■■□□□ 1.75
COPE-209ENST00000599964 ILDR1Q86SU0 546 aaPredicted RBP25.97■■□□□ 1.75
COPE-209ENST00000599964 GGNBP2Q9H3C7 697 aa25.97■■□□□ 1.75
COPE-209ENST00000599964 USP19O94966 1318 aa25.96■■□□□ 1.75
COPE-209ENST00000599964 PLEKHG5O94827 1062 aa25.96■■□□□ 1.75
COPE-209ENST00000599964 KCNH5Q8NCM2 988 aa25.95■■□□□ 1.74
COPE-209ENST00000599964 OVOS2A0A0J9YW53 1432 aa25.95■■□□□ 1.74
COPE-209ENST00000599964 OVOS2Q6IE36 1432 aa25.95■■□□□ 1.74
COPE-209ENST00000599964 NPC1L1Q9UHC9 1359 aa25.95■■□□□ 1.74
COPE-209ENST00000599964 AMER1Q5JTC6 1135 aaPredicted RBP25.94■■□□□ 1.74
COPE-209ENST00000599964 ZRANB1Q9UGI0 708 aa25.94■■□□□ 1.74
COPE-209ENST00000599964 CABLES1Q8TDN4 633 aa25.93■■□□□ 1.74
COPE-209ENST00000599964 ANKRD26Q9UPS8 1709 aa25.93■■□□□ 1.74
COPE-209ENST00000599964 PHRF1Q9P1Y6 1649 aaKnown RBP25.92■■□□□ 1.74
COPE-209ENST00000599964 SLIT3O75094 1523 aa25.92■■□□□ 1.74
COPE-209ENST00000599964 NUTM2BA6NNL0 878 aaPredicted RBP25.91■■□□□ 1.74
COPE-209ENST00000599964 NUTM2EB1AL46 878 aaPredicted RBP25.91■■□□□ 1.74
COPE-209ENST00000599964 NUTM2AQ8IVF1 878 aaPredicted RBP25.91■■□□□ 1.74
COPE-209ENST00000599964 ABCA3Q99758 1704 aa25.91■■□□□ 1.74
COPE-209ENST00000599964 CRYBG1Q9Y4K1 1723 aa25.91■■□□□ 1.74
COPE-209ENST00000599964 GCP02774 474 aa25.9■■□□□ 1.74
COPE-209ENST00000599964 MORC1Q86VD1 984 aa25.9■■□□□ 1.74
COPE-209ENST00000599964 MARF1Q9Y4F3 1742 aaKnown RBP25.9■■□□□ 1.74
COPE-209ENST00000599964 CC2D1BQ5T0F9 858 aaKnown RBP25.89■■□□□ 1.74
COPE-209ENST00000599964 SOX12O15370 315 aa25.86■■□□□ 1.73
COPE-209ENST00000599964 CNGB1Q14028 1251 aaPredicted RBP25.85■■□□□ 1.73
COPE-209ENST00000599964 MEX3CQ5U5Q3 659 aaKnown RBP25.84■■□□□ 1.73
COPE-209ENST00000599964 ADAMTS2O95450 1211 aa25.83■■□□□ 1.73
COPE-209ENST00000599964 ZC3H6P61129 1189 aaKnown RBP25.83■■□□□ 1.73
COPE-209ENST00000599964 NFAT5O94916 1531 aa25.82■■□□□ 1.72
COPE-209ENST00000599964 CPDO75976 1380 aa25.82■■□□□ 1.72
COPE-209ENST00000599964 PRDM11Q9NQV5 511 aa25.81■■□□□ 1.72
COPE-209ENST00000599964 TNNT2P45379 298 aaPredicted RBP25.8■■□□□ 1.72
COPE-209ENST00000599964 LRP6O75581 1613 aa25.8■■□□□ 1.72
COPE-209ENST00000599964 AATKQ6ZMQ8 1374 aa25.8■■□□□ 1.72
COPE-209ENST00000599964 KIAA0232Q92628 1395 aa25.8■■□□□ 1.72
COPE-209ENST00000599964 ZBTB7CA1YPR0 619 aa25.79■■□□□ 1.72
COPE-209ENST00000599964 ARHGEF25Q86VW2 580 aa25.78■■□□□ 1.72
COPE-209ENST00000599964 RALBP1Q15311 655 aa25.77■■□□□ 1.72
COPE-209ENST00000599964 COL14A1Q05707 1796 aaKnown RBP25.76■■□□□ 1.71
COPE-209ENST00000599964 LTN1O94822 1766 aa25.75■■□□□ 1.71
COPE-209ENST00000599964 NGLY1Q96IV0 654 aa25.75■■□□□ 1.71
COPE-209ENST00000599964 KIF24Q5T7B8 1368 aa25.74■■□□□ 1.71
COPE-209ENST00000599964 PARD3Q8TEW0 1356 aa25.74■■□□□ 1.71
COPE-209ENST00000599964 MAP3K19Q56UN5 1328 aa25.74■■□□□ 1.71
COPE-209ENST00000599964 AMPHP49418 695 aa25.74■■□□□ 1.71
COPE-209ENST00000599964 C8orf37Q96NL8 207 aa25.74■■□□□ 1.71
COPE-209ENST00000599964 ABCC6O95255 1503 aa25.73■■□□□ 1.71
COPE-209ENST00000599964 FAM83GA6ND36 823 aa25.73■■□□□ 1.71
COPE-209ENST00000599964 ANP32CO43423 234 aa25.73■■□□□ 1.71
COPE-209ENST00000599964 RRS1Q15050 365 aaKnown RBP25.73■■□□□ 1.71
COPE-209ENST00000599964 RTL1A6NKG5 1358 aa25.72■■□□□ 1.71
COPE-209ENST00000599964 FBLN1P23142 703 aa25.72■■□□□ 1.71
COPE-209ENST00000599964 CHRNA2Q15822 529 aa25.72■■□□□ 1.71
COPE-209ENST00000599964 MAP2P11137 1827 aaKnown RBP25.72■■□□□ 1.71
COPE-209ENST00000599964 PPM1GO15355 546 aaPredicted RBP25.7■■□□□ 1.7
COPE-209ENST00000599964 PRKRIP1Q9H875 184 aaPredicted RBP25.7■■□□□ 1.7
COPE-209ENST00000599964 POLKQ9UBT6 870 aa25.7■■□□□ 1.7
COPE-209ENST00000599964 IP6K1Q92551 441 aa25.69■■□□□ 1.7
COPE-209ENST00000599964 EMILIN1Q9Y6C2 1016 aa25.69■■□□□ 1.7
COPE-209ENST00000599964 FLT4P35916 1363 aa25.69■■□□□ 1.7
COPE-209ENST00000599964 PLCH1Q4KWH8 1693 aa25.68■■□□□ 1.7
COPE-209ENST00000599964 BLMP54132 1417 aaPredicted RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms