RNA–Protein interactions for RNA: ENST00000599907.1

SUPT5H-217, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 4

Gene SUPT5H, Length 859 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-217ENST00000599907 DCCP43146 1447 aa16.68■□□□□ 0.26
SUPT5H-217ENST00000599907 USP6P35125 1406 aa16.67■□□□□ 0.26
SUPT5H-217ENST00000599907 FYB1O15117 783 aa16.66■□□□□ 0.26
SUPT5H-217ENST00000599907 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.66■□□□□ 0.26
SUPT5H-217ENST00000599907 NGDNQ8NEJ9 315 aaKnown RBP16.66■□□□□ 0.26
SUPT5H-217ENST00000599907 PMFBP1Q8TBY8 1022 aa16.66■□□□□ 0.26
SUPT5H-217ENST00000599907 LRRC7Q96NW7 1537 aa16.65■□□□□ 0.26
SUPT5H-217ENST00000599907 GGNBP2Q9H3C7 697 aa16.65■□□□□ 0.26
SUPT5H-217ENST00000599907 MSH6P52701 1360 aa16.64■□□□□ 0.26
SUPT5H-217ENST00000599907 HSPA1LP34931 641 aa16.64■□□□□ 0.25
SUPT5H-217ENST00000599907 PHF8Q9UPP1 1060 aa16.64■□□□□ 0.25
SUPT5H-217ENST00000599907 KIF1AQ12756 1690 aa16.64■□□□□ 0.25
SUPT5H-217ENST00000599907 ATF3P18847 181 aa16.63■□□□□ 0.25
SUPT5H-217ENST00000599907 TTC21BQ7Z4L5 1316 aa16.63■□□□□ 0.25
SUPT5H-217ENST00000599907 SSH2Q76I76 1423 aa16.62■□□□□ 0.25
SUPT5H-217ENST00000599907 C1orf167Q5SNV9 1468 aa16.62■□□□□ 0.25
SUPT5H-217ENST00000599907 FAM9BQ8IZU0 186 aa16.62■□□□□ 0.25
SUPT5H-217ENST00000599907 PNISRQ8TF01 805 aaKnown RBP16.62■□□□□ 0.25
SUPT5H-217ENST00000599907 MST1RQ04912 1400 aa16.62■□□□□ 0.25
SUPT5H-217ENST00000599907 ESCO1Q5FWF5 840 aa16.61■□□□□ 0.25
SUPT5H-217ENST00000599907 CADPS2Q86UW7 1296 aa16.61■□□□□ 0.25
SUPT5H-217ENST00000599907 NME9Q86XW9 330 aa16.61■□□□□ 0.25
SUPT5H-217ENST00000599907 TTC21AQ8NDW8 1320 aa16.61■□□□□ 0.25
SUPT5H-217ENST00000599907 TNNT2P45379 298 aaPredicted RBP16.6■□□□□ 0.25
SUPT5H-217ENST00000599907 COG3Q96JB2 828 aa16.59■□□□□ 0.25
SUPT5H-217ENST00000599907 CENPBP07199 599 aaPredicted RBP16.58■□□□□ 0.24
SUPT5H-217ENST00000599907 PIK3C2AO00443 1686 aa16.57■□□□□ 0.24
SUPT5H-217ENST00000599907 USP54Q70EL1 1684 aa16.57■□□□□ 0.24
SUPT5H-217ENST00000599907 ORAI2Q96SN7 254 aa16.57■□□□□ 0.24
SUPT5H-217ENST00000599907 OVOS2A0A0J9YW53 1432 aa16.56■□□□□ 0.24
SUPT5H-217ENST00000599907 OVOS2Q6IE36 1432 aa16.56■□□□□ 0.24
SUPT5H-217ENST00000599907 ZRANB1Q9UGI0 708 aa16.56■□□□□ 0.24
SUPT5H-217ENST00000599907 MAP2P11137 1827 aaKnown RBP16.56■□□□□ 0.24
SUPT5H-217ENST00000599907 USP31Q70CQ4 1352 aa16.55■□□□□ 0.24
SUPT5H-217ENST00000599907 MTHFSP49914 203 aa16.55■□□□□ 0.24
SUPT5H-217ENST00000599907 CFAP53Q96M91 514 aa16.55■□□□□ 0.24
SUPT5H-217ENST00000599907 INSRP06213 1382 aa16.54■□□□□ 0.24
SUPT5H-217ENST00000599907 AATKQ6ZMQ8 1374 aa16.54■□□□□ 0.24
SUPT5H-217ENST00000599907 PSME1Q06323 249 aa16.54■□□□□ 0.24
SUPT5H-217ENST00000599907 SHPRHQ149N8 1683 aa16.53■□□□□ 0.24
SUPT5H-217ENST00000599907 HNRNPUQ00839 825 aaKnown RBP eCLIP16.53■□□□□ 0.24
SUPT5H-217ENST00000599907 WDR43Q15061 677 aaKnown RBP eCLIP16.53■□□□□ 0.244e-6■□□□□ 9.3
SUPT5H-217ENST00000599907 TRPM3Q9HCF6 1732 aaPredicted RBP16.53■□□□□ 0.24
SUPT5H-217ENST00000599907 PHF23Q9BUL5 403 aaPredicted RBP16.52■□□□□ 0.24
SUPT5H-217ENST00000599907 MARF1Q9Y4F3 1742 aaKnown RBP16.52■□□□□ 0.24
SUPT5H-217ENST00000599907 MED1Q15648 1581 aaPredicted RBP16.51■□□□□ 0.23
SUPT5H-217ENST00000599907 FOXO3O43524 673 aa16.51■□□□□ 0.23
SUPT5H-217ENST00000599907 PAK3O75914 559 aaPredicted RBP16.51■□□□□ 0.23
SUPT5H-217ENST00000599907 SMG6Q86US8 1419 aaKnown RBP16.51■□□□□ 0.23
SUPT5H-217ENST00000599907 COL3A1P02461 1466 aaPredicted RBP16.5■□□□□ 0.23
SUPT5H-217ENST00000599907 BLMP54132 1417 aaPredicted RBP16.5■□□□□ 0.23
SUPT5H-217ENST00000599907 ABTB2Q8N961 1025 aa16.49■□□□□ 0.23
SUPT5H-217ENST00000599907 POLKQ9UBT6 870 aa16.49■□□□□ 0.23
SUPT5H-217ENST00000599907 CDK12Q9NYV4 1490 aaPredicted RBP16.48■□□□□ 0.23
SUPT5H-217ENST00000599907 NLRP6P59044 892 aa16.48■□□□□ 0.23
SUPT5H-217ENST00000599907 KRT28Q7Z3Y7 464 aa16.48■□□□□ 0.23
SUPT5H-217ENST00000599907 SLAIN2Q9P270 581 aa16.48■□□□□ 0.23
SUPT5H-217ENST00000599907 ADAMTS8Q9UP79 889 aa16.48■□□□□ 0.23
SUPT5H-217ENST00000599907 PNPLA6Q8IY17 1366 aa16.48■□□□□ 0.23
SUPT5H-217ENST00000599907 NPHP3Q7Z494 1330 aa16.47■□□□□ 0.23
SUPT5H-217ENST00000599907 ALS2Q96Q42 1657 aa16.46■□□□□ 0.23
SUPT5H-217ENST00000599907 FBLN1P23142 703 aa16.46■□□□□ 0.23
SUPT5H-217ENST00000599907 XPCQ01831 940 aaPredicted RBP16.46■□□□□ 0.23
SUPT5H-217ENST00000599907 EMILIN1Q9Y6C2 1016 aa16.46■□□□□ 0.23
SUPT5H-217ENST00000599907 PPM1GO15355 546 aaPredicted RBP16.45■□□□□ 0.22
SUPT5H-217ENST00000599907 NUTM2GQ5VZR2 741 aa16.45■□□□□ 0.22
SUPT5H-217ENST00000599907 BRINP3Q76B58 766 aa16.45■□□□□ 0.22
SUPT5H-217ENST00000599907 NUDCQ9Y266 331 aa16.45■□□□□ 0.22
SUPT5H-217ENST00000599907 SBNO1A3KN83 1393 aa16.45■□□□□ 0.22
SUPT5H-217ENST00000599907 ZBED9Q6R2W3 1325 aa16.45■□□□□ 0.22
SUPT5H-217ENST00000599907 PXDNQ92626 1479 aa16.44■□□□□ 0.22
SUPT5H-217ENST00000599907 RRS1Q15050 365 aaKnown RBP16.44■□□□□ 0.22
SUPT5H-217ENST00000599907 PEAK1Q9H792 1746 aa16.43■□□□□ 0.22
SUPT5H-217ENST00000599907 DIAPH1O60610 1272 aaKnown RBP16.43■□□□□ 0.22
SUPT5H-217ENST00000599907 NHSL1Q5SYE7 1610 aa16.42■□□□□ 0.22
SUPT5H-217ENST00000599907 SLIT3O75094 1523 aa16.42■□□□□ 0.22
SUPT5H-217ENST00000599907 NFAT5O94916 1531 aa16.41■□□□□ 0.22
SUPT5H-217ENST00000599907 SOX12O15370 315 aa16.41■□□□□ 0.22
SUPT5H-217ENST00000599907 DDX17Q92841 729 aaKnown RBP16.41■□□□□ 0.22
SUPT5H-217ENST00000599907 TNS3Q68CZ2 1445 aa16.41■□□□□ 0.22
SUPT5H-217ENST00000599907 MAP3K19Q56UN5 1328 aa16.41■□□□□ 0.22
SUPT5H-217ENST00000599907 LTN1O94822 1766 aa16.41■□□□□ 0.22
SUPT5H-217ENST00000599907 KIF24Q5T7B8 1368 aa16.4■□□□□ 0.22
SUPT5H-217ENST00000599907 LMOD2Q6P5Q4 547 aa16.4■□□□□ 0.22
SUPT5H-217ENST00000599907 KCNH5Q8NCM2 988 aa16.4■□□□□ 0.22
SUPT5H-217ENST00000599907 USP19O94966 1318 aa16.4■□□□□ 0.22
SUPT5H-217ENST00000599907 FLT4P35916 1363 aa16.39■□□□□ 0.21
SUPT5H-217ENST00000599907 U2SURPO15042 1029 aaKnown RBP16.39■□□□□ 0.21
SUPT5H-217ENST00000599907 U2AF1L5P0DN76 240 aaPredicted RBP16.39■□□□□ 0.21
SUPT5H-217ENST00000599907 U2AF1Q01081 240 aaKnown RBP eCLIP16.39■□□□□ 0.21
SUPT5H-217ENST00000599907 CCDC146Q8IYE0 955 aa16.38■□□□□ 0.21
SUPT5H-217ENST00000599907 SOS2Q07890 1332 aaPredicted RBP16.38■□□□□ 0.21
SUPT5H-217ENST00000599907 SPATA31A3Q5VYP0 1347 aa16.38■□□□□ 0.21
SUPT5H-217ENST00000599907 RTL1A6NKG5 1358 aa16.38■□□□□ 0.21
SUPT5H-217ENST00000599907 ARHGEF10O15013 1369 aa16.38■□□□□ 0.21
SUPT5H-217ENST00000599907 PHRF1Q9P1Y6 1649 aaKnown RBP16.37■□□□□ 0.21
SUPT5H-217ENST00000599907 ROBO1Q9Y6N7 1651 aa16.37■□□□□ 0.21
SUPT5H-217ENST00000599907 IL13P35225 146 aa16.37■□□□□ 0.21
SUPT5H-217ENST00000599907 AMPHP49418 695 aa16.37■□□□□ 0.21
SUPT5H-217ENST00000599907 RUNDC1Q96C34 613 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms