RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 DCCP43146 1447 aa31.46■■■□□ 2.63
SYMPK-212ENST00000598896 TTC21BQ7Z4L5 1316 aa31.45■■■□□ 2.63
SYMPK-212ENST00000598896 PHF8Q9UPP1 1060 aa31.44■■■□□ 2.62
SYMPK-212ENST00000598896 ZRANB1Q9UGI0 708 aa31.44■■■□□ 2.62
SYMPK-212ENST00000598896 ESCO1Q5FWF5 840 aa31.42■■■□□ 2.62
SYMPK-212ENST00000598896 C1orf167Q5SNV9 1468 aa31.42■■■□□ 2.62
SYMPK-212ENST00000598896 MST1RQ04912 1400 aa31.41■■■□□ 2.62
SYMPK-212ENST00000598896 ORAI2Q96SN7 254 aa31.4■■■□□ 2.62
SYMPK-212ENST00000598896 ATF3P18847 181 aa31.39■■■□□ 2.62
SYMPK-212ENST00000598896 MSH6P52701 1360 aa31.39■■■□□ 2.62
SYMPK-212ENST00000598896 MTHFSP49914 203 aa31.37■■■□□ 2.61
SYMPK-212ENST00000598896 PIK3C2AO00443 1686 aa31.36■■■□□ 2.61
SYMPK-212ENST00000598896 TTC21AQ8NDW8 1320 aa31.36■■■□□ 2.61
SYMPK-212ENST00000598896 OVOS2A0A0J9YW53 1432 aa31.35■■■□□ 2.61
SYMPK-212ENST00000598896 OVOS2Q6IE36 1432 aa31.35■■■□□ 2.61
SYMPK-212ENST00000598896 HNRNPUQ00839 825 aaKnown RBP eCLIP31.35■■■□□ 2.61
SYMPK-212ENST00000598896 CENPBP07199 599 aaPredicted RBP31.34■■■□□ 2.61
SYMPK-212ENST00000598896 CADPS2Q86UW7 1296 aa31.34■■■□□ 2.61
SYMPK-212ENST00000598896 KIF1AQ12756 1690 aa31.34■■■□□ 2.61
SYMPK-212ENST00000598896 COG3Q96JB2 828 aa31.33■■■□□ 2.61
SYMPK-212ENST00000598896 FBLN1P23142 703 aa31.32■■■□□ 2.6
SYMPK-212ENST00000598896 SCAF1Q9H7N4 1312 aaKnown RBP31.32■■■□□ 2.6
SYMPK-212ENST00000598896 SHPRHQ149N8 1683 aa31.31■■■□□ 2.6
SYMPK-212ENST00000598896 MAP2P11137 1827 aaKnown RBP31.29■■■□□ 2.6
SYMPK-212ENST00000598896 FOXO3O43524 673 aa31.28■■■□□ 2.6
SYMPK-212ENST00000598896 MARF1Q9Y4F3 1742 aaKnown RBP31.28■■■□□ 2.6
SYMPK-212ENST00000598896 ADAMTS8Q9UP79 889 aa31.27■■■□□ 2.6
SYMPK-212ENST00000598896 AATKQ6ZMQ8 1374 aa31.26■■■□□ 2.6
SYMPK-212ENST00000598896 USP31Q70CQ4 1352 aa31.26■■■□□ 2.6
SYMPK-212ENST00000598896 PSME1Q06323 249 aa31.26■■■□□ 2.59
SYMPK-212ENST00000598896 USP54Q70EL1 1684 aa31.25■■■□□ 2.59
SYMPK-212ENST00000598896 COL3A1P02461 1466 aaPredicted RBP31.25■■■□□ 2.59
SYMPK-212ENST00000598896 POLKQ9UBT6 870 aa31.25■■■□□ 2.59
SYMPK-212ENST00000598896 WDR43Q15061 677 aaKnown RBP eCLIP31.24■■■□□ 2.591e-5■■■■□ 24.6
SYMPK-212ENST00000598896 PAK3O75914 559 aaPredicted RBP31.23■■■□□ 2.59
SYMPK-212ENST00000598896 BLMP54132 1417 aaPredicted RBP31.23■■■□□ 2.59
SYMPK-212ENST00000598896 LTBP4Q8N2S1 1624 aa31.23■■■□□ 2.59
SYMPK-212ENST00000598896 TRPM3Q9HCF6 1732 aaPredicted RBP31.23■■■□□ 2.59
SYMPK-212ENST00000598896 XPCQ01831 940 aaPredicted RBP31.23■■■□□ 2.59
SYMPK-212ENST00000598896 SMG6Q86US8 1419 aaKnown RBP31.22■■■□□ 2.59
SYMPK-212ENST00000598896 CFAP53Q96M91 514 aa31.22■■■□□ 2.59
SYMPK-212ENST00000598896 INSRP06213 1382 aa31.22■■■□□ 2.59
SYMPK-212ENST00000598896 PNPLA6Q8IY17 1366 aa31.21■■■□□ 2.59
SYMPK-212ENST00000598896 EMILIN1Q9Y6C2 1016 aa31.21■■■□□ 2.59
SYMPK-212ENST00000598896 ABTB2Q8N961 1025 aa31.2■■■□□ 2.58
SYMPK-212ENST00000598896 SENP3-EIF4A1A0A087X0R7 540 aa31.19■■■□□ 2.58
SYMPK-212ENST00000598896 NLRP6P59044 892 aa31.18■■■□□ 2.58
SYMPK-212ENST00000598896 RRS1Q15050 365 aaKnown RBP31.18■■■□□ 2.58
SYMPK-212ENST00000598896 NUTM2GQ5VZR2 741 aa31.18■■■□□ 2.58
SYMPK-212ENST00000598896 PPM1GO15355 546 aaPredicted RBP31.16■■■□□ 2.58
SYMPK-212ENST00000598896 CDK12Q9NYV4 1490 aaPredicted RBP31.16■■■□□ 2.58
SYMPK-212ENST00000598896 DDX17Q92841 729 aaKnown RBP31.16■■■□□ 2.58
SYMPK-212ENST00000598896 ZBED9Q6R2W3 1325 aa31.15■■■□□ 2.58
SYMPK-212ENST00000598896 KRT28Q7Z3Y7 464 aa31.15■■■□□ 2.58
SYMPK-212ENST00000598896 SLAIN2Q9P270 581 aa31.14■■■□□ 2.58
SYMPK-212ENST00000598896 BRINP3Q76B58 766 aa31.14■■■□□ 2.58
SYMPK-212ENST00000598896 SOX12O15370 315 aa31.13■■■□□ 2.57
SYMPK-212ENST00000598896 PEAK1Q9H792 1746 aa31.13■■■□□ 2.57
SYMPK-212ENST00000598896 ALS2Q96Q42 1657 aa31.11■■■□□ 2.57
SYMPK-212ENST00000598896 PXDNQ92626 1479 aa31.09■■■□□ 2.57
SYMPK-212ENST00000598896 NPHP3Q7Z494 1330 aa31.09■■■□□ 2.57
SYMPK-212ENST00000598896 DIAPH1O60610 1272 aaKnown RBP31.08■■■□□ 2.57
SYMPK-212ENST00000598896 AEBP2Q6ZN18 517 aaPredicted RBP31.07■■■□□ 2.56
SYMPK-212ENST00000598896 CCDC146Q8IYE0 955 aa31.07■■■□□ 2.56
SYMPK-212ENST00000598896 MAP3K19Q56UN5 1328 aa31.06■■■□□ 2.56
SYMPK-212ENST00000598896 NFAT5O94916 1531 aa31.05■■■□□ 2.56
SYMPK-212ENST00000598896 SBNO1A3KN83 1393 aa31.04■■■□□ 2.56
SYMPK-212ENST00000598896 U2AF1L5P0DN76 240 aaPredicted RBP31.03■■■□□ 2.56
SYMPK-212ENST00000598896 U2AF1Q01081 240 aaKnown RBP eCLIP31.03■■■□□ 2.56
SYMPK-212ENST00000598896 LMOD2Q6P5Q4 547 aa31.03■■■□□ 2.56
SYMPK-212ENST00000598896 NUDCQ9Y266 331 aa31.03■■■□□ 2.56
SYMPK-212ENST00000598896 SLIT3O75094 1523 aa31.02■■■□□ 2.56
SYMPK-212ENST00000598896 U2SURPO15042 1029 aaKnown RBP31.02■■■□□ 2.56
SYMPK-212ENST00000598896 SALL2Q9Y467 1007 aaPredicted RBP31.01■■■□□ 2.55
SYMPK-212ENST00000598896 IL13P35225 146 aa31■■■□□ 2.55
SYMPK-212ENST00000598896 TNS3Q68CZ2 1445 aa31■■■□□ 2.55
SYMPK-212ENST00000598896 LTN1O94822 1766 aa31■■■□□ 2.55
SYMPK-212ENST00000598896 USP19O94966 1318 aa30.99■■■□□ 2.55
SYMPK-212ENST00000598896 NHSL1Q5SYE7 1610 aa30.98■■■□□ 2.55
SYMPK-212ENST00000598896 HSP90AB2PQ58FF8 381 aa30.98■■■□□ 2.55
SYMPK-212ENST00000598896 FLT4P35916 1363 aa30.98■■■□□ 2.55
SYMPK-212ENST00000598896 MED1Q15648 1581 aaPredicted RBP30.98■■■□□ 2.55
SYMPK-212ENST00000598896 APAF1O14727 1248 aa30.95■■■□□ 2.55
SYMPK-212ENST00000598896 SOS2Q07890 1332 aaPredicted RBP30.95■■■□□ 2.55
SYMPK-212ENST00000598896 SPATA31A3Q5VYP0 1347 aa30.95■■■□□ 2.55
SYMPK-212ENST00000598896 IQSEC2Q5JU85 1478 aa30.95■■■□□ 2.54
SYMPK-212ENST00000598896 PLEKHG5O94827 1062 aa30.95■■■□□ 2.54
SYMPK-212ENST00000598896 KCNH5Q8NCM2 988 aa30.95■■■□□ 2.54
SYMPK-212ENST00000598896 EIF4A2Q14240 407 aaKnown RBP30.94■■■□□ 2.54
SYMPK-212ENST00000598896 GCP02774 474 aa30.93■■■□□ 2.54
SYMPK-212ENST00000598896 AMPHP49418 695 aa30.93■■■□□ 2.54
SYMPK-212ENST00000598896 RUNDC1Q96C34 613 aa30.93■■■□□ 2.54
SYMPK-212ENST00000598896 KIF24Q5T7B8 1368 aa30.93■■■□□ 2.54
SYMPK-212ENST00000598896 ROBO1Q9Y6N7 1651 aa30.93■■■□□ 2.54
SYMPK-212ENST00000598896 PHRF1Q9P1Y6 1649 aaKnown RBP30.92■■■□□ 2.54
SYMPK-212ENST00000598896 PLEKHF1Q96S99 279 aa30.91■■■□□ 2.54
SYMPK-212ENST00000598896 RGPD1P0DJD0 1748 aa30.91■■■□□ 2.54
SYMPK-212ENST00000598896 CRYBG1Q9Y4K1 1723 aa30.91■■■□□ 2.54
SYMPK-212ENST00000598896 HOXC9P31274 260 aa30.91■■■□□ 2.54
SYMPK-212ENST00000598896 RTL1A6NKG5 1358 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms