RNA–Protein interactions for RNA: ENST00000598155.5

SYMPK-209, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-209ENST00000598155 VPS72Q15906 364 aa28.83■■■□□ 2.21
SYMPK-209ENST00000598155 POLR3AO14802 1390 aaPredicted RBP28.83■■■□□ 2.21
SYMPK-209ENST00000598155 FAM83GA6ND36 823 aa28.8■■■□□ 2.2
SYMPK-209ENST00000598155 NEUROD1Q13562 356 aa28.8■■■□□ 2.2
SYMPK-209ENST00000598155 PLEKHG3A1L390 1219 aa28.79■■■□□ 2.2
SYMPK-209ENST00000598155 ACEP12821 1306 aa28.78■■■□□ 2.2
SYMPK-209ENST00000598155 TRPM1Q7Z4N2 1603 aa28.76■■■□□ 2.19
SYMPK-209ENST00000598155 CRYBG1Q9Y4K1 1723 aa28.76■■■□□ 2.19
SYMPK-209ENST00000598155 SRPK2P78362 688 aaKnown RBP28.76■■■□□ 2.19
SYMPK-209ENST00000598155 COL14A1Q05707 1796 aaKnown RBP28.75■■■□□ 2.19
SYMPK-209ENST00000598155 NBPF8Q3BBV2 869 aa28.75■■■□□ 2.19
SYMPK-209ENST00000598155 CCDC9Q9Y3X0 531 aaKnown RBP28.75■■■□□ 2.19
SYMPK-209ENST00000598155 QRICH2Q9H0J4 1663 aa28.75■■■□□ 2.19
SYMPK-209ENST00000598155 ROCK2O75116 1388 aaKnown RBP28.73■■■□□ 2.19
SYMPK-209ENST00000598155 BTG4Q9NY30 223 aa28.72■■■□□ 2.19
SYMPK-209ENST00000598155 PPIP5K1Q6PFW1 1433 aa28.72■■■□□ 2.19
SYMPK-209ENST00000598155 NRAPQ86VF7 1730 aa28.72■■■□□ 2.19
SYMPK-209ENST00000598155 CABP2Q9NPB3 220 aa28.71■■■□□ 2.19
SYMPK-209ENST00000598155 SEPT12Q8IYM1 358 aa28.7■■■□□ 2.19
SYMPK-209ENST00000598155 ONECUT3O60422 494 aaPredicted RBP28.69■■■□□ 2.18
SYMPK-209ENST00000598155 CCDC125Q86Z20 511 aa28.69■■■□□ 2.18
SYMPK-209ENST00000598155 PRDM11Q9NQV5 511 aa28.69■■■□□ 2.18
SYMPK-209ENST00000598155 BRD4O60885 1362 aaPredicted RBP28.67■■■□□ 2.18
SYMPK-209ENST00000598155 PHRF1Q9P1Y6 1649 aaKnown RBP28.67■■■□□ 2.18
SYMPK-209ENST00000598155 EVC2Q86UK5 1308 aa28.66■■■□□ 2.18
SYMPK-209ENST00000598155 KIAA0232Q92628 1395 aa28.65■■■□□ 2.18
SYMPK-209ENST00000598155 NUTM2GQ5VZR2 741 aa28.64■■■□□ 2.18
SYMPK-209ENST00000598155 ABTB2Q8N961 1025 aa28.64■■■□□ 2.18
SYMPK-209ENST00000598155 USP19O94966 1318 aa28.61■■■□□ 2.17
SYMPK-209ENST00000598155 SPATA31A5Q5VU36 1347 aa28.61■■■□□ 2.17
SYMPK-209ENST00000598155 SPATA31A7Q8IWB4 1347 aa28.61■■■□□ 2.17
SYMPK-209ENST00000598155 CABP1Q9NZU7 370 aa28.61■■■□□ 2.17
SYMPK-209ENST00000598155 BRWD3Q6RI45 1802 aa28.6■■■□□ 2.17
SYMPK-209ENST00000598155 BLMP54132 1417 aaPredicted RBP28.6■■■□□ 2.17
SYMPK-209ENST00000598155 KRT27Q7Z3Y8 459 aa28.6■■■□□ 2.17
SYMPK-209ENST00000598155 EP400Q96L91 3159 aa28.6■■■□□ 2.17
SYMPK-209ENST00000598155 NRKQ7Z2Y5 1582 aa28.6■■■□□ 2.17
SYMPK-209ENST00000598155 USP6P35125 1406 aa28.59■■■□□ 2.17
SYMPK-209ENST00000598155 TONSLQ96HA7 1378 aa28.59■■■□□ 2.17
SYMPK-209ENST00000598155 A0A0G2JS52 829 aa28.59■■■□□ 2.17
SYMPK-209ENST00000598155 ZC3H6P61129 1189 aaKnown RBP28.59■■■□□ 2.17
SYMPK-209ENST00000598155 MYT1Q01538 1121 aa28.59■■■□□ 2.17
SYMPK-209ENST00000598155 FAM98CQ17RN3 349 aaKnown RBP28.59■■■□□ 2.17
SYMPK-209ENST00000598155 CHRNA2Q15822 529 aa28.58■■■□□ 2.17
SYMPK-209ENST00000598155 NLRP13Q86W25 1043 aa28.58■■■□□ 2.17
SYMPK-209ENST00000598155 CPDO75976 1380 aa28.56■■■□□ 2.16
SYMPK-209ENST00000598155 SBNO2Q9Y2G9 1366 aa28.54■■■□□ 2.16
SYMPK-209ENST00000598155 CARD11Q9BXL7 1154 aa28.53■■■□□ 2.16
SYMPK-209ENST00000598155 SPATA31A1Q5TZJ5 1347 aa28.52■■■□□ 2.16
SYMPK-209ENST00000598155 SSH2Q76I76 1423 aa28.52■■■□□ 2.16
SYMPK-209ENST00000598155 GCP02774 474 aa28.51■■■□□ 2.15
SYMPK-209ENST00000598155 STRN4Q9NRL3 753 aa28.51■■■□□ 2.15
SYMPK-209ENST00000598155 THSD7AQ9UPZ6 1657 aa28.51■■■□□ 2.15
SYMPK-209ENST00000598155 SF3B2Q13435 895 aaKnown RBP28.51■■■□□ 2.15
SYMPK-209ENST00000598155 ZNF692Q9BU19 519 aaPredicted RBP28.5■■■□□ 2.15
SYMPK-209ENST00000598155 NLRP6P59044 892 aa28.48■■■□□ 2.15
SYMPK-209ENST00000598155 LMO7Q8WWI1 1683 aa28.48■■■□□ 2.15
SYMPK-209ENST00000598155 EVA1CP58658 441 aa28.47■■■□□ 2.15
SYMPK-209ENST00000598155 ZRANB1Q9UGI0 708 aa28.47■■■□□ 2.15
SYMPK-209ENST00000598155 CAMTA1Q9Y6Y1 1673 aa28.47■■■□□ 2.15
SYMPK-209ENST00000598155 SLIT3O75094 1523 aa28.47■■■□□ 2.15
SYMPK-209ENST00000598155 CPSF1Q10570 1443 aaKnown RBP28.44■■■□□ 2.14
SYMPK-209ENST00000598155 PIK3C2AO00443 1686 aa28.43■■■□□ 2.14
SYMPK-209ENST00000598155 TTC21BQ7Z4L5 1316 aa28.43■■■□□ 2.14
SYMPK-209ENST00000598155 TTC21AQ8NDW8 1320 aa28.43■■■□□ 2.14
SYMPK-209ENST00000598155 BARGINQ6ZT62 677 aa28.42■■■□□ 2.14
SYMPK-209ENST00000598155 DEFB132Q7Z7B7 95 aa28.42■■■□□ 2.14
SYMPK-209ENST00000598155 AKAP12Q02952 1782 aa28.41■■■□□ 2.14
SYMPK-209ENST00000598155 COL5A2P05997 1499 aaPredicted RBP28.4■■■□□ 2.14
SYMPK-209ENST00000598155 AATKQ6ZMQ8 1374 aa28.4■■■□□ 2.14
SYMPK-209ENST00000598155 LARP1Q6PKG0 1096 aaKnown RBP28.4■■■□□ 2.14
SYMPK-209ENST00000598155 KTN1Q86UP2 1357 aaKnown RBP28.4■■■□□ 2.14
SYMPK-209ENST00000598155 ZEB1P37275 1124 aaPredicted RBP28.4■■■□□ 2.14
SYMPK-209ENST00000598155 USP35Q9P2H5 1018 aa28.39■■■□□ 2.13
SYMPK-209ENST00000598155 TCP11L2Q8N4U5 519 aa28.38■■■□□ 2.13
SYMPK-209ENST00000598155 BAG6P46379 1132 aa28.37■■■□□ 2.13
SYMPK-209ENST00000598155 THRAP3Q9Y2W1 955 aaKnown RBP28.37■■■□□ 2.13
SYMPK-209ENST00000598155 ZBTB7CA1YPR0 619 aa28.36■■■□□ 2.13
SYMPK-209ENST00000598155 FAM182BQ5T319 152 aa28.36■■■□□ 2.13
SYMPK-209ENST00000598155 KCNH5Q8NCM2 988 aa28.36■■■□□ 2.13
SYMPK-209ENST00000598155 CRB1P82279 1406 aa28.34■■■□□ 2.13
SYMPK-209ENST00000598155 PUS7Q96PZ0 661 aaKnown RBP28.33■■■□□ 2.13
SYMPK-209ENST00000598155 RGPD1P0DJD0 1748 aa28.33■■■□□ 2.13
SYMPK-209ENST00000598155 MON2Q7Z3U7 1717 aa28.33■■■□□ 2.13
SYMPK-209ENST00000598155 FAM196AQ6ZSG2 479 aa28.32■■■□□ 2.12
SYMPK-209ENST00000598155 CD163L1Q9NR16 1453 aa28.31■■■□□ 2.12
SYMPK-209ENST00000598155 ARHGEF25Q86VW2 580 aa28.31■■■□□ 2.12
SYMPK-209ENST00000598155 PDE3BQ13370 1112 aa28.3■■■□□ 2.12
SYMPK-209ENST00000598155 TMC1Q8TDI8 760 aa28.3■■■□□ 2.12
SYMPK-209ENST00000598155 DISP2A7MBM2 1401 aa28.3■■■□□ 2.12
SYMPK-209ENST00000598155 HDGFL2Q7Z4V5 671 aaPredicted RBP28.29■■■□□ 2.12
SYMPK-209ENST00000598155 COL18A1P39060 1754 aa28.28■■■□□ 2.12
SYMPK-209ENST00000598155 USP31Q70CQ4 1352 aa28.28■■■□□ 2.12
SYMPK-209ENST00000598155 SLC24A1O60721 1099 aa28.28■■■□□ 2.12
SYMPK-209ENST00000598155 NFAT5O94916 1531 aa28.27■■■□□ 2.12
SYMPK-209ENST00000598155 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.26■■■□□ 2.11
SYMPK-209ENST00000598155 TESK2Q96S53 571 aa28.26■■■□□ 2.11
SYMPK-209ENST00000598155 TERF2IPQ9NYB0 399 aa28.26■■■□□ 2.11
SYMPK-209ENST00000598155 EDC4Q6P2E9 1401 aaKnown RBP28.26■■■□□ 2.11
SYMPK-209ENST00000598155 SOX12O15370 315 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms