RNA–Protein interactions for RNA: ENST00000596957.1

ARHGEF1-214, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-214ENST00000596957 BRD4O60885 1362 aaPredicted RBP20.56■□□□□ 0.88
ARHGEF1-214ENST00000596957 MYOM1P52179 1685 aa20.54■□□□□ 0.88
ARHGEF1-214ENST00000596957 TTC21BQ7Z4L5 1316 aa20.54■□□□□ 0.88
ARHGEF1-214ENST00000596957 EDC4Q6P2E9 1401 aaKnown RBP20.54■□□□□ 0.88
ARHGEF1-214ENST00000596957 ABTB2Q8N961 1025 aa20.54■□□□□ 0.88
ARHGEF1-214ENST00000596957 SPATA31A3Q5VYP0 1347 aa20.53■□□□□ 0.88
ARHGEF1-214ENST00000596957 TNS3Q68CZ2 1445 aa20.53■□□□□ 0.88
ARHGEF1-214ENST00000596957 NSD3Q9BZ95 1437 aa20.53■□□□□ 0.88
ARHGEF1-214ENST00000596957 DDX10Q13206 875 aaKnown RBP20.53■□□□□ 0.88
ARHGEF1-214ENST00000596957 KNSTRNQ9Y448 316 aa20.53■□□□□ 0.88
ARHGEF1-214ENST00000596957 TTC21AQ8NDW8 1320 aa20.53■□□□□ 0.88
ARHGEF1-214ENST00000596957 ARHGEF10O15013 1369 aa20.52■□□□□ 0.88
ARHGEF1-214ENST00000596957 NUTM2GQ5VZR2 741 aa20.52■□□□□ 0.88
ARHGEF1-214ENST00000596957 HAP1P54257 671 aaPredicted RBP20.51■□□□□ 0.87
ARHGEF1-214ENST00000596957 CARD14Q9BXL6 1004 aa20.51■□□□□ 0.87
ARHGEF1-214ENST00000596957 COL16A1Q07092 1604 aaPredicted RBP20.5■□□□□ 0.87
ARHGEF1-214ENST00000596957 NLRP6P59044 892 aa20.5■□□□□ 0.87
ARHGEF1-214ENST00000596957 CGNL1Q0VF96 1302 aa20.5■□□□□ 0.87
ARHGEF1-214ENST00000596957 JCADQ9P266 1359 aa20.49■□□□□ 0.87
ARHGEF1-214ENST00000596957 NME9Q86XW9 330 aa20.49■□□□□ 0.87
ARHGEF1-214ENST00000596957 AKAP12Q02952 1782 aa20.49■□□□□ 0.87
ARHGEF1-214ENST00000596957 SSH2Q76I76 1423 aa20.48■□□□□ 0.87
ARHGEF1-214ENST00000596957 NLRP13Q86W25 1043 aa20.48■□□□□ 0.87
ARHGEF1-214ENST00000596957 PNPLA6Q8IY17 1366 aa20.47■□□□□ 0.87
ARHGEF1-214ENST00000596957 CNGB1Q14028 1251 aaPredicted RBP20.47■□□□□ 0.87
ARHGEF1-214ENST00000596957 MON2Q7Z3U7 1717 aa20.47■□□□□ 0.87
ARHGEF1-214ENST00000596957 COG3Q96JB2 828 aa20.46■□□□□ 0.87
ARHGEF1-214ENST00000596957 GGNBP2Q9H3C7 697 aa20.46■□□□□ 0.87
ARHGEF1-214ENST00000596957 TRPM3Q9HCF6 1732 aaPredicted RBP20.45■□□□□ 0.86
ARHGEF1-214ENST00000596957 NUTM2BA6NNL0 878 aaPredicted RBP20.45■□□□□ 0.86
ARHGEF1-214ENST00000596957 NUTM2EB1AL46 878 aaPredicted RBP20.45■□□□□ 0.86
ARHGEF1-214ENST00000596957 NUTM2AQ8IVF1 878 aaPredicted RBP20.45■□□□□ 0.86
ARHGEF1-214ENST00000596957 NRKQ7Z2Y5 1582 aa20.44■□□□□ 0.86
ARHGEF1-214ENST00000596957 ZRANB1Q9UGI0 708 aa20.44■□□□□ 0.86
ARHGEF1-214ENST00000596957 FYB1O15117 783 aa20.43■□□□□ 0.86
ARHGEF1-214ENST00000596957 SOX12O15370 315 aa20.43■□□□□ 0.86
ARHGEF1-214ENST00000596957 CABLES1Q8TDN4 633 aa20.43■□□□□ 0.86
ARHGEF1-214ENST00000596957 CC2D1BQ5T0F9 858 aaKnown RBP20.41■□□□□ 0.86
ARHGEF1-214ENST00000596957 SPATA31A6Q5VVP1 1343 aa20.41■□□□□ 0.86
ARHGEF1-214ENST00000596957 PER1O15534 1290 aaPredicted RBP20.4■□□□□ 0.86
ARHGEF1-214ENST00000596957 ALS2Q96Q42 1657 aa20.39■□□□□ 0.86
ARHGEF1-214ENST00000596957 NSD2O96028 1365 aa20.39■□□□□ 0.85
ARHGEF1-214ENST00000596957 USP31Q70CQ4 1352 aa20.39■□□□□ 0.85
ARHGEF1-214ENST00000596957 MORC1Q86VD1 984 aa20.39■□□□□ 0.85
ARHGEF1-214ENST00000596957 PIK3C2AO00443 1686 aa20.38■□□□□ 0.85
ARHGEF1-214ENST00000596957 ZBTB7CA1YPR0 619 aa20.38■□□□□ 0.85
ARHGEF1-214ENST00000596957 ADAMTS2O95450 1211 aa20.38■□□□□ 0.85
ARHGEF1-214ENST00000596957 MEX3CQ5U5Q3 659 aaKnown RBP20.38■□□□□ 0.85
ARHGEF1-214ENST00000596957 KCNH5Q8NCM2 988 aa20.38■□□□□ 0.85
ARHGEF1-214ENST00000596957 USP19O94966 1318 aa20.37■□□□□ 0.85
ARHGEF1-214ENST00000596957 AMER1Q5JTC6 1135 aaPredicted RBP20.37■□□□□ 0.85
ARHGEF1-214ENST00000596957 OVOS2A0A0J9YW53 1432 aa20.36■□□□□ 0.85
ARHGEF1-214ENST00000596957 OVOS2Q6IE36 1432 aa20.36■□□□□ 0.85
ARHGEF1-214ENST00000596957 SHPRHQ149N8 1683 aa20.36■□□□□ 0.85
ARHGEF1-214ENST00000596957 GCP02774 474 aa20.36■□□□□ 0.85
ARHGEF1-214ENST00000596957 TNNT2P45379 298 aaPredicted RBP20.36■□□□□ 0.85
ARHGEF1-214ENST00000596957 MED1Q15648 1581 aaPredicted RBP20.35■□□□□ 0.85
ARHGEF1-214ENST00000596957 ZC3H6P61129 1189 aaKnown RBP20.35■□□□□ 0.85
ARHGEF1-214ENST00000596957 COL22A1Q8NFW1 1626 aaPredicted RBP20.34■□□□□ 0.85
ARHGEF1-214ENST00000596957 KIF20BQ96Q89 1820 aa20.32■□□□□ 0.84
ARHGEF1-214ENST00000596957 PRDM11Q9NQV5 511 aa20.32■□□□□ 0.84
ARHGEF1-214ENST00000596957 NPC1L1Q9UHC9 1359 aa20.32■□□□□ 0.84
ARHGEF1-214ENST00000596957 SLIT3O75094 1523 aa20.3■□□□□ 0.84
ARHGEF1-214ENST00000596957 C8orf37Q96NL8 207 aa20.29■□□□□ 0.84
ARHGEF1-214ENST00000596957 KIAA0232Q92628 1395 aa20.29■□□□□ 0.84
ARHGEF1-214ENST00000596957 LRP6O75581 1613 aa20.27■□□□□ 0.84
ARHGEF1-214ENST00000596957 PHRF1Q9P1Y6 1649 aaKnown RBP20.27■□□□□ 0.84
ARHGEF1-214ENST00000596957 PPM1GO15355 546 aaPredicted RBP20.27■□□□□ 0.84
ARHGEF1-214ENST00000596957 FBLN1P23142 703 aa20.27■□□□□ 0.84
ARHGEF1-214ENST00000596957 AMPHP49418 695 aa20.27■□□□□ 0.84
ARHGEF1-214ENST00000596957 RRS1Q15050 365 aaKnown RBP20.27■□□□□ 0.84
ARHGEF1-214ENST00000596957 CHRNA2Q15822 529 aa20.27■□□□□ 0.84
ARHGEF1-214ENST00000596957 NGLY1Q96IV0 654 aa20.27■□□□□ 0.84
ARHGEF1-214ENST00000596957 CPDO75976 1380 aa20.25■□□□□ 0.83
ARHGEF1-214ENST00000596957 ANP32CO43423 234 aa20.25■□□□□ 0.83
ARHGEF1-214ENST00000596957 ARHGEF25Q86VW2 580 aa20.25■□□□□ 0.83
ARHGEF1-214ENST00000596957 USP54Q70EL1 1684 aa20.25■□□□□ 0.83
ARHGEF1-214ENST00000596957 NFAT5O94916 1531 aa20.24■□□□□ 0.83
ARHGEF1-214ENST00000596957 FAM83GA6ND36 823 aa20.24■□□□□ 0.83
ARHGEF1-214ENST00000596957 ABCA3Q99758 1704 aa20.24■□□□□ 0.83
ARHGEF1-214ENST00000596957 MAP3K19Q56UN5 1328 aa20.24■□□□□ 0.83
ARHGEF1-214ENST00000596957 AATKQ6ZMQ8 1374 aa20.23■□□□□ 0.83
ARHGEF1-214ENST00000596957 RALBP1Q15311 655 aa20.23■□□□□ 0.83
ARHGEF1-214ENST00000596957 MARF1Q9Y4F3 1742 aaKnown RBP20.22■□□□□ 0.83
ARHGEF1-214ENST00000596957 CRYBG1Q9Y4K1 1723 aa20.22■□□□□ 0.83
ARHGEF1-214ENST00000596957 PHF23Q9BUL5 403 aaPredicted RBP20.22■□□□□ 0.83
ARHGEF1-214ENST00000596957 EMILIN1Q9Y6C2 1016 aa20.22■□□□□ 0.83
ARHGEF1-214ENST00000596957 ANKRD26Q9UPS8 1709 aa20.22■□□□□ 0.83
ARHGEF1-214ENST00000596957 BTG4Q9NY30 223 aa20.21■□□□□ 0.83
ARHGEF1-214ENST00000596957 EVA1CP58658 441 aa20.2■□□□□ 0.82
ARHGEF1-214ENST00000596957 POLKQ9UBT6 870 aa20.2■□□□□ 0.82
ARHGEF1-214ENST00000596957 PARD3Q8TEW0 1356 aa20.2■□□□□ 0.82
ARHGEF1-214ENST00000596957 DIEXFQ68CQ4 756 aaKnown RBP20.19■□□□□ 0.82
ARHGEF1-214ENST00000596957 IP6K1Q92551 441 aa20.19■□□□□ 0.82
ARHGEF1-214ENST00000596957 STRN4Q9NRL3 753 aa20.19■□□□□ 0.82
ARHGEF1-214ENST00000596957 AFF2P51816 1311 aa20.19■□□□□ 0.82
ARHGEF1-214ENST00000596957 CSB-PGBD3P0DP91 1061 aa20.18■□□□□ 0.82
ARHGEF1-214ENST00000596957 PPP2R1AP30153 589 aa20.18■□□□□ 0.82
ARHGEF1-214ENST00000596957 HOXC9P31274 260 aa20.18■□□□□ 0.82
ARHGEF1-214ENST00000596957 PRKRIP1Q9H875 184 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms