RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 ESCO1Q5FWF5 840 aa12□□□□□ -0.49
SNRPA-202ENST00000596860 AMER1Q5JTC6 1135 aaPredicted RBP12□□□□□ -0.49
SNRPA-202ENST00000596860 CARD14Q9BXL6 1004 aa12□□□□□ -0.49
SNRPA-202ENST00000596860 RALBP1Q15311 655 aa11.99□□□□□ -0.49
SNRPA-202ENST00000596860 NGDNQ8NEJ9 315 aaKnown RBP11.99□□□□□ -0.49
SNRPA-202ENST00000596860 NPHP3Q7Z494 1330 aa11.99□□□□□ -0.49
SNRPA-202ENST00000596860 TRPM3Q9HCF6 1732 aaPredicted RBP11.99□□□□□ -0.49
SNRPA-202ENST00000596860 AHDC1Q5TGY3 1603 aaPredicted RBP11.98□□□□□ -0.49
SNRPA-202ENST00000596860 SBNO1A3KN83 1393 aa11.98□□□□□ -0.49
SNRPA-202ENST00000596860 USP31Q70CQ4 1352 aa11.98□□□□□ -0.49
SNRPA-202ENST00000596860 PARD3Q8TEW0 1356 aa11.98□□□□□ -0.49
SNRPA-202ENST00000596860 TTC21BQ7Z4L5 1316 aa11.97□□□□□ -0.49
SNRPA-202ENST00000596860 NUTM2FA1L443 756 aa11.97□□□□□ -0.49
SNRPA-202ENST00000596860 ANP32CO43423 234 aa11.97□□□□□ -0.49
SNRPA-202ENST00000596860 PSME1Q06323 249 aa11.97□□□□□ -0.49
SNRPA-202ENST00000596860 BRINP3Q76B58 766 aa11.97□□□□□ -0.49
SNRPA-202ENST00000596860 ORAI2Q96SN7 254 aa11.96□□□□□ -0.49
SNRPA-202ENST00000596860 PRKRIP1Q9H875 184 aaPredicted RBP11.96□□□□□ -0.49
SNRPA-202ENST00000596860 ALS2Q96Q42 1657 aa11.96□□□□□ -0.5
SNRPA-202ENST00000596860 ROBO1Q9Y6N7 1651 aa11.96□□□□□ -0.5
SNRPA-202ENST00000596860 PXDNQ92626 1479 aa11.95□□□□□ -0.5
SNRPA-202ENST00000596860 SOS2Q07890 1332 aaPredicted RBP11.95□□□□□ -0.5
SNRPA-202ENST00000596860 PMFBP1Q8TBY8 1022 aa11.95□□□□□ -0.5
SNRPA-202ENST00000596860 PIK3C2AO00443 1686 aa11.94□□□□□ -0.5
SNRPA-202ENST00000596860 FYB1O15117 783 aa11.94□□□□□ -0.5
SNRPA-202ENST00000596860 OVOS2A0A0J9YW53 1432 aa11.94□□□□□ -0.5
SNRPA-202ENST00000596860 OVOS2Q6IE36 1432 aa11.94□□□□□ -0.5
SNRPA-202ENST00000596860 TNS3Q68CZ2 1445 aa11.93□□□□□ -0.5
SNRPA-202ENST00000596860 ARHGEF10O15013 1369 aa11.92□□□□□ -0.5
SNRPA-202ENST00000596860 AATKQ6ZMQ8 1374 aa11.92□□□□□ -0.5
SNRPA-202ENST00000596860 MARF1Q9Y4F3 1742 aaKnown RBP11.92□□□□□ -0.5
SNRPA-202ENST00000596860 CCER2I3L3R5 266 aa11.92□□□□□ -0.5
SNRPA-202ENST00000596860 FOXO3O43524 673 aa11.92□□□□□ -0.5
SNRPA-202ENST00000596860 KRT28Q7Z3Y7 464 aa11.92□□□□□ -0.5
SNRPA-202ENST00000596860 COG3Q96JB2 828 aa11.91□□□□□ -0.5
SNRPA-202ENST00000596860 KIF24Q5T7B8 1368 aa11.91□□□□□ -0.5
SNRPA-202ENST00000596860 MYBBP1AQ9BQG0 1328 aaKnown RBP11.9□□□□□ -0.5
SNRPA-202ENST00000596860 PHRF1Q9P1Y6 1649 aaKnown RBP11.9□□□□□ -0.5
SNRPA-202ENST00000596860 SLIT3O75094 1523 aa11.9□□□□□ -0.5
SNRPA-202ENST00000596860 USP19O94966 1318 aa11.89□□□□□ -0.51
SNRPA-202ENST00000596860 SPATA31A3Q5VYP0 1347 aa11.89□□□□□ -0.51
SNRPA-202ENST00000596860 SMG6Q86US8 1419 aaKnown RBP11.89□□□□□ -0.51
SNRPA-202ENST00000596860 MAP2P11137 1827 aaKnown RBP11.89□□□□□ -0.51
SNRPA-202ENST00000596860 MORC1Q86VD1 984 aa11.89□□□□□ -0.51
SNRPA-202ENST00000596860 NLRP13Q86W25 1043 aa11.89□□□□□ -0.51
SNRPA-202ENST00000596860 COL16A1Q07092 1604 aaPredicted RBP11.89□□□□□ -0.51
SNRPA-202ENST00000596860 COL22A1Q8NFW1 1626 aaPredicted RBP11.89□□□□□ -0.51
SNRPA-202ENST00000596860 PHLPP1O60346 1717 aa11.89□□□□□ -0.51
SNRPA-202ENST00000596860 CRYBG1Q9Y4K1 1723 aa11.89□□□□□ -0.51
SNRPA-202ENST00000596860 ABCC6O95255 1503 aa11.88□□□□□ -0.51
SNRPA-202ENST00000596860 NME9Q86XW9 330 aa11.88□□□□□ -0.51
SNRPA-202ENST00000596860 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.88□□□□□ -0.51
SNRPA-202ENST00000596860 ABTB2Q8N961 1025 aa11.88□□□□□ -0.51
SNRPA-202ENST00000596860 KCNH5Q8NCM2 988 aa11.88□□□□□ -0.51
SNRPA-202ENST00000596860 INSRP06213 1382 aa11.88□□□□□ -0.51
SNRPA-202ENST00000596860 CC2D1BQ5T0F9 858 aaKnown RBP11.87□□□□□ -0.51
SNRPA-202ENST00000596860 LRRC59Q96AG4 307 aaKnown RBP11.87□□□□□ -0.51
SNRPA-202ENST00000596860 NLRP6P59044 892 aa11.86□□□□□ -0.51
SNRPA-202ENST00000596860 GGNBP2Q9H3C7 697 aa11.86□□□□□ -0.51
SNRPA-202ENST00000596860 NFAT5O94916 1531 aa11.86□□□□□ -0.51
SNRPA-202ENST00000596860 SHPRHQ149N8 1683 aa11.85□□□□□ -0.51
SNRPA-202ENST00000596860 RTL1A6NKG5 1358 aa11.85□□□□□ -0.51
SNRPA-202ENST00000596860 PAK3O75914 559 aaPredicted RBP11.85□□□□□ -0.51
SNRPA-202ENST00000596860 PPP2R1AP30153 589 aa11.85□□□□□ -0.51
SNRPA-202ENST00000596860 CDK12Q9NYV4 1490 aaPredicted RBP11.84□□□□□ -0.51
SNRPA-202ENST00000596860 PNPLA6Q8IY17 1366 aa11.84□□□□□ -0.51
SNRPA-202ENST00000596860 ABCA3Q99758 1704 aa11.84□□□□□ -0.51
SNRPA-202ENST00000596860 MIER1Q8N108 512 aa11.84□□□□□ -0.51
SNRPA-202ENST00000596860 CPDO75976 1380 aa11.83□□□□□ -0.52
SNRPA-202ENST00000596860 LTN1O94822 1766 aa11.83□□□□□ -0.52
SNRPA-202ENST00000596860 RGS17Q9UGC6 210 aaPredicted RBP11.83□□□□□ -0.52
SNRPA-202ENST00000596860 GCP02774 474 aa11.81□□□□□ -0.52
SNRPA-202ENST00000596860 XPCQ01831 940 aaPredicted RBP11.81□□□□□ -0.52
SNRPA-202ENST00000596860 CFAP53Q96M91 514 aa11.81□□□□□ -0.52
SNRPA-202ENST00000596860 POLKQ9UBT6 870 aa11.81□□□□□ -0.52
SNRPA-202ENST00000596860 FLT4P35916 1363 aa11.8□□□□□ -0.52
SNRPA-202ENST00000596860 JCADQ9P266 1359 aa11.8□□□□□ -0.52
SNRPA-202ENST00000596860 DDX17Q92841 729 aaKnown RBP11.8□□□□□ -0.52
SNRPA-202ENST00000596860 ZRANB1Q9UGI0 708 aa11.8□□□□□ -0.52
SNRPA-202ENST00000596860 BLMP54132 1417 aaPredicted RBP11.79□□□□□ -0.52
SNRPA-202ENST00000596860 COL3A1P02461 1466 aaPredicted RBP11.79□□□□□ -0.52
SNRPA-202ENST00000596860 MTHFSP49914 203 aa11.79□□□□□ -0.52
SNRPA-202ENST00000596860 ARHGEF25Q86VW2 580 aa11.79□□□□□ -0.52
SNRPA-202ENST00000596860 FAM208AQ9UK61 1670 aaKnown RBP11.78□□□□□ -0.52
SNRPA-202ENST00000596860 PEAK1Q9H792 1746 aa11.78□□□□□ -0.52
SNRPA-202ENST00000596860 COL18A1P39060 1754 aa11.78□□□□□ -0.52
SNRPA-202ENST00000596860 MAP3K19Q56UN5 1328 aa11.78□□□□□ -0.52
SNRPA-202ENST00000596860 LMOD2Q6P5Q4 547 aa11.77□□□□□ -0.53
SNRPA-202ENST00000596860 IP6K1Q92551 441 aa11.77□□□□□ -0.53
SNRPA-202ENST00000596860 MRS2Q9HD23 443 aa11.77□□□□□ -0.53
SNRPA-202ENST00000596860 SPATA31A6Q5VVP1 1343 aa11.77□□□□□ -0.53
SNRPA-202ENST00000596860 LMO7Q8WWI1 1683 aa11.76□□□□□ -0.53
SNRPA-202ENST00000596860 PNISRQ8TF01 805 aaKnown RBP11.76□□□□□ -0.53
SNRPA-202ENST00000596860 COL14A1Q05707 1796 aaKnown RBP11.76□□□□□ -0.53
SNRPA-202ENST00000596860 PLEKHG2Q9H7P9 1386 aa11.76□□□□□ -0.53
SNRPA-202ENST00000596860 TNNT2P45379 298 aaPredicted RBP11.75□□□□□ -0.53
SNRPA-202ENST00000596860 NUTM2GQ5VZR2 741 aa11.75□□□□□ -0.53
SNRPA-202ENST00000596860 NUDCQ9Y266 331 aa11.75□□□□□ -0.53
SNRPA-202ENST00000596860 RGPD1P0DJD0 1748 aa11.74□□□□□ -0.53
SNRPA-202ENST00000596860 NWD2Q9ULI1 1742 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms