RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 KTN1Q86UP2 1357 aaKnown RBP26.84■■□□□ 1.89
PNKP-207ENST00000596014 MON2Q7Z3U7 1717 aa26.83■■□□□ 1.88
PNKP-207ENST00000596014 SPATA31A6Q5VVP1 1343 aa26.82■■□□□ 1.88
PNKP-207ENST00000596014 ARHGEF10O15013 1369 aa26.82■■□□□ 1.88
PNKP-207ENST00000596014 MYOM1P52179 1685 aa26.82■■□□□ 1.88
PNKP-207ENST00000596014 SSH2Q76I76 1423 aa26.82■■□□□ 1.88
PNKP-207ENST00000596014 COL22A1Q8NFW1 1626 aaPredicted RBP26.82■■□□□ 1.88
PNKP-207ENST00000596014 A0A1W2PP64 1363 aa26.81■■□□□ 1.88
PNKP-207ENST00000596014 KIF7Q2M1P5 1343 aa26.79■■□□□ 1.88
PNKP-207ENST00000596014 ANKRD36BQ8N2N9 1353 aa26.79■■□□□ 1.88
PNKP-207ENST00000596014 TTC21BQ7Z4L5 1316 aa26.78■■□□□ 1.88
PNKP-207ENST00000596014 ABTB2Q8N961 1025 aa26.78■■□□□ 1.88
PNKP-207ENST00000596014 NUTM2BA6NNL0 878 aaPredicted RBP26.77■■□□□ 1.88
PNKP-207ENST00000596014 NUTM2EB1AL46 878 aaPredicted RBP26.77■■□□□ 1.88
PNKP-207ENST00000596014 NUTM2AQ8IVF1 878 aaPredicted RBP26.77■■□□□ 1.88
PNKP-207ENST00000596014 NRKQ7Z2Y5 1582 aa26.77■■□□□ 1.88
PNKP-207ENST00000596014 TTC21AQ8NDW8 1320 aa26.74■■□□□ 1.87
PNKP-207ENST00000596014 PLEKHG5O94827 1062 aa26.74■■□□□ 1.87
PNKP-207ENST00000596014 NUTM2GQ5VZR2 741 aa26.74■■□□□ 1.87
PNKP-207ENST00000596014 CABLES1Q8TDN4 633 aa26.74■■□□□ 1.87
PNKP-207ENST00000596014 EDC4Q6P2E9 1401 aaKnown RBP26.74■■□□□ 1.87
PNKP-207ENST00000596014 WASHC2AQ641Q2 1341 aa26.74■■□□□ 1.87
PNKP-207ENST00000596014 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.73■■□□□ 1.87
PNKP-207ENST00000596014 LRP6O75581 1613 aa26.73■■□□□ 1.87
PNKP-207ENST00000596014 CCDC7Q96M83 1385 aa26.72■■□□□ 1.87
PNKP-207ENST00000596014 PIK3C2AO00443 1686 aa26.71■■□□□ 1.87
PNKP-207ENST00000596014 MED1Q15648 1581 aaPredicted RBP26.71■■□□□ 1.87
PNKP-207ENST00000596014 NLRP13Q86W25 1043 aa26.7■■□□□ 1.87
PNKP-207ENST00000596014 CARD14Q9BXL6 1004 aa26.7■■□□□ 1.87
PNKP-207ENST00000596014 NLRP6P59044 892 aa26.7■■□□□ 1.86
PNKP-207ENST00000596014 ABCA3Q99758 1704 aa26.69■■□□□ 1.86
PNKP-207ENST00000596014 CRYBG1Q9Y4K1 1723 aa26.69■■□□□ 1.86
PNKP-207ENST00000596014 ADAMTS2O95450 1211 aa26.68■■□□□ 1.86
PNKP-207ENST00000596014 HAP1P54257 671 aaPredicted RBP26.67■■□□□ 1.86
PNKP-207ENST00000596014 NME9Q86XW9 330 aa26.67■■□□□ 1.86
PNKP-207ENST00000596014 PANK3Q9H999 370 aa26.67■■□□□ 1.86
PNKP-207ENST00000596014 MEX3CQ5U5Q3 659 aaKnown RBP26.66■■□□□ 1.86
PNKP-207ENST00000596014 USP19O94966 1318 aa26.65■■□□□ 1.86
PNKP-207ENST00000596014 ZRANB1Q9UGI0 708 aa26.64■■□□□ 1.86
PNKP-207ENST00000596014 MARF1Q9Y4F3 1742 aaKnown RBP26.64■■□□□ 1.86
PNKP-207ENST00000596014 NSD3Q9BZ95 1437 aa26.64■■□□□ 1.85
PNKP-207ENST00000596014 USP31Q70CQ4 1352 aa26.63■■□□□ 1.85
PNKP-207ENST00000596014 PHRF1Q9P1Y6 1649 aaKnown RBP26.63■■□□□ 1.85
PNKP-207ENST00000596014 FYB1O15117 783 aa26.6■■□□□ 1.85
PNKP-207ENST00000596014 GCP02774 474 aa26.6■■□□□ 1.85
PNKP-207ENST00000596014 C8orf37Q96NL8 207 aa26.6■■□□□ 1.85
PNKP-207ENST00000596014 USP54Q70EL1 1684 aa26.6■■□□□ 1.85
PNKP-207ENST00000596014 SLIT3O75094 1523 aa26.58■■□□□ 1.85
PNKP-207ENST00000596014 NGLY1Q96IV0 654 aa26.58■■□□□ 1.85
PNKP-207ENST00000596014 KIF20BQ96Q89 1820 aa26.57■■□□□ 1.84
PNKP-207ENST00000596014 GGNBP2Q9H3C7 697 aa26.57■■□□□ 1.84
PNKP-207ENST00000596014 OVOS2A0A0J9YW53 1432 aa26.56■■□□□ 1.84
PNKP-207ENST00000596014 OVOS2Q6IE36 1432 aa26.56■■□□□ 1.84
PNKP-207ENST00000596014 ZC3H6P61129 1189 aaKnown RBP26.56■■□□□ 1.84
PNKP-207ENST00000596014 CGNL1Q0VF96 1302 aa26.55■■□□□ 1.84
PNKP-207ENST00000596014 KCNH5Q8NCM2 988 aa26.55■■□□□ 1.84
PNKP-207ENST00000596014 COG3Q96JB2 828 aa26.55■■□□□ 1.84
PNKP-207ENST00000596014 PHF23Q9BUL5 403 aaPredicted RBP26.55■■□□□ 1.84
PNKP-207ENST00000596014 FAM83GA6ND36 823 aa26.54■■□□□ 1.84
PNKP-207ENST00000596014 KIAA0232Q92628 1395 aa26.53■■□□□ 1.84
PNKP-207ENST00000596014 SOX12O15370 315 aa26.53■■□□□ 1.84
PNKP-207ENST00000596014 KNSTRNQ9Y448 316 aa26.53■■□□□ 1.84
PNKP-207ENST00000596014 AFF2P51816 1311 aa26.52■■□□□ 1.84
PNKP-207ENST00000596014 PER1O15534 1290 aaPredicted RBP26.52■■□□□ 1.84
PNKP-207ENST00000596014 FNBP4Q8N3X1 1017 aaPredicted RBP26.52■■□□□ 1.84
PNKP-207ENST00000596014 PRDM11Q9NQV5 511 aa26.52■■□□□ 1.84
PNKP-207ENST00000596014 RGS17Q9UGC6 210 aaPredicted RBP26.51■■□□□ 1.83
PNKP-207ENST00000596014 CPDO75976 1380 aa26.51■■□□□ 1.83
PNKP-207ENST00000596014 NFAT5O94916 1531 aa26.49■■□□□ 1.83
PNKP-207ENST00000596014 COL14A1Q05707 1796 aaKnown RBP26.49■■□□□ 1.83
PNKP-207ENST00000596014 CHRNA2Q15822 529 aa26.48■■□□□ 1.83
PNKP-207ENST00000596014 SLIT2O94813 1529 aa26.47■■□□□ 1.83
PNKP-207ENST00000596014 PLCH1Q4KWH8 1693 aa26.47■■□□□ 1.83
PNKP-207ENST00000596014 ARHGEF25Q86VW2 580 aa26.47■■□□□ 1.83
PNKP-207ENST00000596014 USP21Q9UK80 565 aa26.47■■□□□ 1.83
PNKP-207ENST00000596014 ZNF772Q68DY9 489 aaPredicted RBP26.46■■□□□ 1.83
PNKP-207ENST00000596014 ZBTB7CA1YPR0 619 aa26.45■■□□□ 1.82
PNKP-207ENST00000596014 AMER1Q5JTC6 1135 aaPredicted RBP26.45■■□□□ 1.82
PNKP-207ENST00000596014 BCL9LQ86UU0 1499 aa26.45■■□□□ 1.82
PNKP-207ENST00000596014 NWD2Q9ULI1 1742 aa26.45■■□□□ 1.82
PNKP-207ENST00000596014 BTG4Q9NY30 223 aa26.44■■□□□ 1.82
PNKP-207ENST00000596014 ANKRD26Q9UPS8 1709 aa26.44■■□□□ 1.82
PNKP-207ENST00000596014 NSD2O96028 1365 aa26.44■■□□□ 1.82
PNKP-207ENST00000596014 ZNF316A6NFI3 1004 aaPredicted RBP26.44■■□□□ 1.82
PNKP-207ENST00000596014 FBLN1P23142 703 aa26.44■■□□□ 1.82
PNKP-207ENST00000596014 LTN1O94822 1766 aa26.43■■□□□ 1.82
PNKP-207ENST00000596014 UNC5CLQ8IV45 518 aa26.42■■□□□ 1.82
PNKP-207ENST00000596014 AATKQ6ZMQ8 1374 aa26.42■■□□□ 1.82
PNKP-207ENST00000596014 COL18A1P39060 1754 aa26.41■■□□□ 1.82
PNKP-207ENST00000596014 LMO7Q8WWI1 1683 aa26.41■■□□□ 1.82
PNKP-207ENST00000596014 DDX10Q13206 875 aaKnown RBP26.41■■□□□ 1.82
PNKP-207ENST00000596014 POTEAQ6S8J7 498 aa26.4■■□□□ 1.82
PNKP-207ENST00000596014 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.4■■□□□ 1.82
PNKP-207ENST00000596014 CAMTA1Q9Y6Y1 1673 aa26.4■■□□□ 1.82
PNKP-207ENST00000596014 QTRT2Q9H974 415 aaKnown RBP26.39■■□□□ 1.82
PNKP-207ENST00000596014 NRAPQ86VF7 1730 aa26.38■■□□□ 1.81
PNKP-207ENST00000596014 AXIN2Q9Y2T1 843 aa26.38■■□□□ 1.81
PNKP-207ENST00000596014 RGPD5Q99666 1765 aa26.37■■□□□ 1.81
PNKP-207ENST00000596014 MAP3K19Q56UN5 1328 aa26.37■■□□□ 1.81
PNKP-207ENST00000596014 CC2D1BQ5T0F9 858 aaKnown RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms