RNA–Protein interactions for RNA: ENST00000593283.5

CIRBP-244, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-244ENST00000593283 CCDC61Q9Y6R9 512 aa25.38■■□□□ 1.65
CIRBP-244ENST00000593283 NRAPQ86VF7 1730 aa25.37■■□□□ 1.65
CIRBP-244ENST00000593283 GLI3P10071 1580 aa25.37■■□□□ 1.65
CIRBP-244ENST00000593283 PAK3O75914 559 aaPredicted RBP25.37■■□□□ 1.65
CIRBP-244ENST00000593283 SRPK2P78362 688 aaKnown RBP25.37■■□□□ 1.65
CIRBP-244ENST00000593283 PPIP5K1Q6PFW1 1433 aa25.37■■□□□ 1.65
CIRBP-244ENST00000593283 RALGAPBQ86X10 1494 aa25.36■■□□□ 1.65
CIRBP-244ENST00000593283 COL14A1Q05707 1796 aaKnown RBP25.36■■□□□ 1.65
CIRBP-244ENST00000593283 ACEP12821 1306 aa25.36■■□□□ 1.65
CIRBP-244ENST00000593283 UNC5CLQ8IV45 518 aa25.35■■□□□ 1.65
CIRBP-244ENST00000593283 CABP2Q9NPB3 220 aa25.35■■□□□ 1.65
CIRBP-244ENST00000593283 PLEKHG3A1L390 1219 aa25.34■■□□□ 1.65
CIRBP-244ENST00000593283 UPF1Q92900 1129 aaKnown RBP eCLIP25.32■■□□□ 1.64
CIRBP-244ENST00000593283 GJD4Q96KN9 370 aaPredicted RBP25.31■■□□□ 1.64
CIRBP-244ENST00000593283 EVC2Q86UK5 1308 aa25.3■■□□□ 1.64
CIRBP-244ENST00000593283 FAM83GA6ND36 823 aa25.29■■□□□ 1.64
CIRBP-244ENST00000593283 NRKQ7Z2Y5 1582 aa25.29■■□□□ 1.64
CIRBP-244ENST00000593283 BRWD3Q6RI45 1802 aa25.28■■□□□ 1.64
CIRBP-244ENST00000593283 AKAP12Q02952 1782 aa25.27■■□□□ 1.64
CIRBP-244ENST00000593283 NUTM2GQ5VZR2 741 aa25.26■■□□□ 1.63
CIRBP-244ENST00000593283 CARD11Q9BXL7 1154 aa25.25■■□□□ 1.63
CIRBP-244ENST00000593283 ATAD2Q6PL18 1390 aa25.25■■□□□ 1.63
CIRBP-244ENST00000593283 USP6P35125 1406 aa25.24■■□□□ 1.63
CIRBP-244ENST00000593283 SBNO2Q9Y2G9 1366 aa25.24■■□□□ 1.63
CIRBP-244ENST00000593283 VPS72Q15906 364 aa25.24■■□□□ 1.63
CIRBP-244ENST00000593283 CABP1Q9NZU7 370 aa25.23■■□□□ 1.63
CIRBP-244ENST00000593283 KIAA0232Q92628 1395 aa25.22■■□□□ 1.63
CIRBP-244ENST00000593283 PRDM11Q9NQV5 511 aa25.22■■□□□ 1.63
CIRBP-244ENST00000593283 PIK3C2AO00443 1686 aa25.22■■□□□ 1.63
CIRBP-244ENST00000593283 EP400Q96L91 3159 aa25.21■■□□□ 1.63
CIRBP-244ENST00000593283 BTG4Q9NY30 223 aa25.21■■□□□ 1.63
CIRBP-244ENST00000593283 CCDC9Q9Y3X0 531 aaKnown RBP25.21■■□□□ 1.63
CIRBP-244ENST00000593283 BRD4O60885 1362 aaPredicted RBP25.2■■□□□ 1.63
CIRBP-244ENST00000593283 USP19O94966 1318 aa25.2■■□□□ 1.62
CIRBP-244ENST00000593283 ABTB2Q8N961 1025 aa25.2■■□□□ 1.62
CIRBP-244ENST00000593283 MON2Q7Z3U7 1717 aa25.18■■□□□ 1.62
CIRBP-244ENST00000593283 LMO7Q8WWI1 1683 aa25.17■■□□□ 1.62
CIRBP-244ENST00000593283 CHRNA2Q15822 529 aa25.16■■□□□ 1.62
CIRBP-244ENST00000593283 SSH2Q76I76 1423 aa25.16■■□□□ 1.62
CIRBP-244ENST00000593283 ZC3H6P61129 1189 aaKnown RBP25.15■■□□□ 1.62
CIRBP-244ENST00000593283 SLIT3O75094 1523 aa25.14■■□□□ 1.62
CIRBP-244ENST00000593283 SEPT12Q8IYM1 358 aa25.13■■□□□ 1.61
CIRBP-244ENST00000593283 NLRP13Q86W25 1043 aa25.12■■□□□ 1.61
CIRBP-244ENST00000593283 CPDO75976 1380 aa25.12■■□□□ 1.61
CIRBP-244ENST00000593283 THSD7AQ9UPZ6 1657 aa25.12■■□□□ 1.61
CIRBP-244ENST00000593283 CPSF1Q10570 1443 aaKnown RBP25.12■■□□□ 1.61
CIRBP-244ENST00000593283 SPATA31A5Q5VU36 1347 aa25.11■■□□□ 1.61
CIRBP-244ENST00000593283 SPATA31A7Q8IWB4 1347 aa25.11■■□□□ 1.61
CIRBP-244ENST00000593283 CAMTA1Q9Y6Y1 1673 aa25.1■■□□□ 1.61
CIRBP-244ENST00000593283 ONECUT3O60422 494 aaPredicted RBP25.09■■□□□ 1.61
CIRBP-244ENST00000593283 FAM98CQ17RN3 349 aaKnown RBP25.09■■□□□ 1.61
CIRBP-244ENST00000593283 A0A0G2JS52 829 aa25.08■■□□□ 1.61
CIRBP-244ENST00000593283 MYT1Q01538 1121 aa25.08■■□□□ 1.61
CIRBP-244ENST00000593283 PCGF6Q9BYE7 350 aa25.08■■□□□ 1.61
CIRBP-244ENST00000593283 CD163L1Q9NR16 1453 aa25.08■■□□□ 1.6
CIRBP-244ENST00000593283 KTN1Q86UP2 1357 aaKnown RBP25.07■■□□□ 1.6
CIRBP-244ENST00000593283 GCP02774 474 aa25.07■■□□□ 1.6
CIRBP-244ENST00000593283 NLRP6P59044 892 aa25.07■■□□□ 1.6
CIRBP-244ENST00000593283 STRN4Q9NRL3 753 aa25.07■■□□□ 1.6
CIRBP-244ENST00000593283 TTC21BQ7Z4L5 1316 aa25.07■■□□□ 1.6
CIRBP-244ENST00000593283 ZNF692Q9BU19 519 aaPredicted RBP25.06■■□□□ 1.6
CIRBP-244ENST00000593283 USP54Q70EL1 1684 aa25.05■■□□□ 1.6
CIRBP-244ENST00000593283 COL18A1P39060 1754 aa25.04■■□□□ 1.6
CIRBP-244ENST00000593283 SPATA31A1Q5TZJ5 1347 aa25.04■■□□□ 1.6
CIRBP-244ENST00000593283 TTC21AQ8NDW8 1320 aa25.04■■□□□ 1.6
CIRBP-244ENST00000593283 ST20-MTHFSA0A0A6YYL1 179 aa25.03■■□□□ 1.6
CIRBP-244ENST00000593283 KRT27Q7Z3Y8 459 aa25.03■■□□□ 1.6
CIRBP-244ENST00000593283 TESK2Q96S53 571 aa25.03■■□□□ 1.6
CIRBP-244ENST00000593283 CLSPNQ9HAW4 1339 aa25.03■■□□□ 1.6
CIRBP-244ENST00000593283 COL5A2P05997 1499 aaPredicted RBP25.02■■□□□ 1.6
CIRBP-244ENST00000593283 USP47Q96K76 1375 aa25.02■■□□□ 1.6
CIRBP-244ENST00000593283 NFAT5O94916 1531 aa25.02■■□□□ 1.6
CIRBP-244ENST00000593283 TMC1Q8TDI8 760 aa25.01■■□□□ 1.59
CIRBP-244ENST00000593283 BLMP54132 1417 aaPredicted RBP25.01■■□□□ 1.59
CIRBP-244ENST00000593283 RGPD5Q99666 1765 aa25■■□□□ 1.59
CIRBP-244ENST00000593283 ZBTB7CA1YPR0 619 aa25■■□□□ 1.59
CIRBP-244ENST00000593283 A0A1W2PP64 1363 aa24.98■■□□□ 1.59
CIRBP-244ENST00000593283 AATKQ6ZMQ8 1374 aa24.98■■□□□ 1.59
CIRBP-244ENST00000593283 EVA1CP58658 441 aa24.98■■□□□ 1.59
CIRBP-244ENST00000593283 LARP1Q6PKG0 1096 aaKnown RBP24.98■■□□□ 1.59
CIRBP-244ENST00000593283 CCDC125Q86Z20 511 aa24.98■■□□□ 1.59
CIRBP-244ENST00000593283 SLC12A5Q9H2X9 1139 aa24.98■■□□□ 1.59
CIRBP-244ENST00000593283 PUS7Q96PZ0 661 aaKnown RBP24.97■■□□□ 1.59
CIRBP-244ENST00000593283 USP35Q9P2H5 1018 aa24.97■■□□□ 1.59
CIRBP-244ENST00000593283 EDC4Q6P2E9 1401 aaKnown RBP24.96■■□□□ 1.59
CIRBP-244ENST00000593283 WNK3Q9BYP7 1800 aa24.96■■□□□ 1.59
CIRBP-244ENST00000593283 HDGFL2Q7Z4V5 671 aaPredicted RBP24.96■■□□□ 1.59
CIRBP-244ENST00000593283 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.96■■□□□ 1.59
CIRBP-244ENST00000593283 RGPD1P0DJD0 1748 aa24.95■■□□□ 1.59
CIRBP-244ENST00000593283 SOX12O15370 315 aa24.95■■□□□ 1.58
CIRBP-244ENST00000593283 LTN1O94822 1766 aa24.95■■□□□ 1.58
CIRBP-244ENST00000593283 NINLQ9Y2I6 1382 aa24.94■■□□□ 1.58
CIRBP-244ENST00000593283 TIMELESSQ9UNS1 1208 aa24.94■■□□□ 1.58
CIRBP-244ENST00000593283 PARP4Q9UKK3 1724 aaKnown RBP24.94■■□□□ 1.58
CIRBP-244ENST00000593283 USP31Q70CQ4 1352 aa24.93■■□□□ 1.58
CIRBP-244ENST00000593283 NME9Q86XW9 330 aa24.93■■□□□ 1.58
CIRBP-244ENST00000593283 ZRANB1Q9UGI0 708 aa24.93■■□□□ 1.58
CIRBP-244ENST00000593283 TNS1Q9HBL0 1735 aaKnown RBP24.92■■□□□ 1.58
CIRBP-244ENST00000593283 ABCC6O95255 1503 aa24.92■■□□□ 1.58
CIRBP-244ENST00000593283 KCNH5Q8NCM2 988 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms