RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 SRPK2P78362 688 aaKnown RBP23.14■■□□□ 1.29
CIRBP-240ENST00000592815 GLI3P10071 1580 aa23.14■■□□□ 1.29
CIRBP-240ENST00000592815 CCDC125Q86Z20 511 aa23.13■■□□□ 1.29
CIRBP-240ENST00000592815 ONECUT3O60422 494 aaPredicted RBP23.12■■□□□ 1.29
CIRBP-240ENST00000592815 NUTM2GQ5VZR2 741 aa23.12■■□□□ 1.29
CIRBP-240ENST00000592815 CABP2Q9NPB3 220 aa23.12■■□□□ 1.29
CIRBP-240ENST00000592815 ALS2Q96Q42 1657 aa23.11■■□□□ 1.29
CIRBP-240ENST00000592815 PRDM11Q9NQV5 511 aa23.1■■□□□ 1.29
CIRBP-240ENST00000592815 POLR3AO14802 1390 aaPredicted RBP23.1■■□□□ 1.29
CIRBP-240ENST00000592815 ABCA3Q99758 1704 aa23.1■■□□□ 1.29
CIRBP-240ENST00000592815 A0A0G2JS52 829 aa23.08■■□□□ 1.29
CIRBP-240ENST00000592815 MYT1Q01538 1121 aa23.08■■□□□ 1.29
CIRBP-240ENST00000592815 PLCH1Q4KWH8 1693 aa23.08■■□□□ 1.29
CIRBP-240ENST00000592815 FAM98CQ17RN3 349 aaKnown RBP23.07■■□□□ 1.28
CIRBP-240ENST00000592815 ABTB2Q8N961 1025 aa23.07■■□□□ 1.28
CIRBP-240ENST00000592815 NWD2Q9ULI1 1742 aa23.07■■□□□ 1.28
CIRBP-240ENST00000592815 ITSN1Q15811 1721 aa23.06■■□□□ 1.28
CIRBP-240ENST00000592815 ZC3H6P61129 1189 aaKnown RBP23.06■■□□□ 1.28
CIRBP-240ENST00000592815 KRT27Q7Z3Y8 459 aa23.06■■□□□ 1.28
CIRBP-240ENST00000592815 CHRNA2Q15822 529 aa23.05■■□□□ 1.28
CIRBP-240ENST00000592815 EP400Q96L91 3159 aa23.05■■□□□ 1.28
CIRBP-240ENST00000592815 KIAA0232Q92628 1395 aa23.04■■□□□ 1.28
CIRBP-240ENST00000592815 CABP1Q9NZU7 370 aa23.04■■□□□ 1.28
CIRBP-240ENST00000592815 PPIP5K1Q6PFW1 1433 aa23.04■■□□□ 1.28
CIRBP-240ENST00000592815 SPATA31A5Q5VU36 1347 aa23.03■■□□□ 1.28
CIRBP-240ENST00000592815 SPATA31A7Q8IWB4 1347 aa23.03■■□□□ 1.28
CIRBP-240ENST00000592815 COL14A1Q05707 1796 aaKnown RBP23.02■■□□□ 1.28
CIRBP-240ENST00000592815 ROCK2O75116 1388 aaKnown RBP23.01■■□□□ 1.27
CIRBP-240ENST00000592815 STRN4Q9NRL3 753 aa23.01■■□□□ 1.27
CIRBP-240ENST00000592815 SF3B2Q13435 895 aaKnown RBP23■■□□□ 1.27
CIRBP-240ENST00000592815 ZRANB1Q9UGI0 708 aa23■■□□□ 1.27
CIRBP-240ENST00000592815 EVC2Q86UK5 1308 aa23■■□□□ 1.27
CIRBP-240ENST00000592815 TOPAZ1Q8N9V7 1692 aa23■■□□□ 1.27
CIRBP-240ENST00000592815 BLMP54132 1417 aaPredicted RBP22.99■■□□□ 1.27
CIRBP-240ENST00000592815 NLRP13Q86W25 1043 aa22.99■■□□□ 1.27
CIRBP-240ENST00000592815 EVA1CP58658 441 aa22.98■■□□□ 1.27
CIRBP-240ENST00000592815 BRWD3Q6RI45 1802 aa22.98■■□□□ 1.27
CIRBP-240ENST00000592815 NRAPQ86VF7 1730 aa22.97■■□□□ 1.27
CIRBP-240ENST00000592815 CRYBG1Q9Y4K1 1723 aa22.97■■□□□ 1.27
CIRBP-240ENST00000592815 DEFB132Q7Z7B7 95 aa22.97■■□□□ 1.27
CIRBP-240ENST00000592815 USP19O94966 1318 aa22.95■■□□□ 1.26
CIRBP-240ENST00000592815 GCP02774 474 aa22.95■■□□□ 1.26
CIRBP-240ENST00000592815 SPATA31A1Q5TZJ5 1347 aa22.95■■□□□ 1.26
CIRBP-240ENST00000592815 QRICH2Q9H0J4 1663 aa22.95■■□□□ 1.26
CIRBP-240ENST00000592815 TRPM1Q7Z4N2 1603 aa22.94■■□□□ 1.26
CIRBP-240ENST00000592815 BRD4O60885 1362 aaPredicted RBP22.94■■□□□ 1.26
CIRBP-240ENST00000592815 NLRP6P59044 892 aa22.94■■□□□ 1.26
CIRBP-240ENST00000592815 FAM182BQ5T319 152 aa22.94■■□□□ 1.26
CIRBP-240ENST00000592815 USP35Q9P2H5 1018 aa22.93■■□□□ 1.26
CIRBP-240ENST00000592815 USP6P35125 1406 aa22.91■■□□□ 1.26
CIRBP-240ENST00000592815 CPDO75976 1380 aa22.91■■□□□ 1.26
CIRBP-240ENST00000592815 PHRF1Q9P1Y6 1649 aaKnown RBP22.91■■□□□ 1.26
CIRBP-240ENST00000592815 CARD11Q9BXL7 1154 aa22.91■■□□□ 1.26
CIRBP-240ENST00000592815 ZBTB7CA1YPR0 619 aa22.9■■□□□ 1.26
CIRBP-240ENST00000592815 LARP1Q6PKG0 1096 aaKnown RBP22.9■■□□□ 1.26
CIRBP-240ENST00000592815 ZNF692Q9BU19 519 aaPredicted RBP22.9■■□□□ 1.26
CIRBP-240ENST00000592815 TONSLQ96HA7 1378 aa22.89■■□□□ 1.25
CIRBP-240ENST00000592815 TRIM26Q12899 539 aaPredicted RBP22.88■■□□□ 1.25
CIRBP-240ENST00000592815 SSH2Q76I76 1423 aa22.87■■□□□ 1.25
CIRBP-240ENST00000592815 CAMTA1Q9Y6Y1 1673 aa22.87■■□□□ 1.25
CIRBP-240ENST00000592815 NRKQ7Z2Y5 1582 aa22.86■■□□□ 1.25
CIRBP-240ENST00000592815 BAG6P46379 1132 aa22.86■■□□□ 1.25
CIRBP-240ENST00000592815 BARGINQ6ZT62 677 aa22.86■■□□□ 1.25
CIRBP-240ENST00000592815 TTC21BQ7Z4L5 1316 aa22.85■■□□□ 1.25
CIRBP-240ENST00000592815 TCP11L2Q8N4U5 519 aa22.85■■□□□ 1.25
CIRBP-240ENST00000592815 SRCAPQ6ZRS2 3230 aa22.83■■□□□ 1.25
CIRBP-240ENST00000592815 THSD7AQ9UPZ6 1657 aa22.82■■□□□ 1.24
CIRBP-240ENST00000592815 EN1Q05925 392 aaPredicted RBP22.82■■□□□ 1.24
CIRBP-240ENST00000592815 PDE3BQ13370 1112 aa22.82■■□□□ 1.24
CIRBP-240ENST00000592815 FAM196AQ6ZSG2 479 aa22.82■■□□□ 1.24
CIRBP-240ENST00000592815 AATKQ6ZMQ8 1374 aa22.8■■□□□ 1.24
CIRBP-240ENST00000592815 SOX12O15370 315 aa22.8■■□□□ 1.24
CIRBP-240ENST00000592815 THRAP3Q9Y2W1 955 aaKnown RBP22.8■■□□□ 1.24
CIRBP-240ENST00000592815 KTN1Q86UP2 1357 aaKnown RBP22.79■■□□□ 1.24
CIRBP-240ENST00000592815 TRIM37O94972 964 aa22.79■■□□□ 1.24
CIRBP-240ENST00000592815 TMC1Q8TDI8 760 aa22.79■■□□□ 1.24
CIRBP-240ENST00000592815 CPSF1Q10570 1443 aaKnown RBP22.79■■□□□ 1.24
CIRBP-240ENST00000592815 TTC21AQ8NDW8 1320 aa22.79■■□□□ 1.24
CIRBP-240ENST00000592815 SBNO2Q9Y2G9 1366 aa22.78■■□□□ 1.24
CIRBP-240ENST00000592815 LMO7Q8WWI1 1683 aa22.78■■□□□ 1.24
CIRBP-240ENST00000592815 KCNH5Q8NCM2 988 aa22.78■■□□□ 1.24
CIRBP-240ENST00000592815 COL5A2P05997 1499 aaPredicted RBP22.78■■□□□ 1.24
CIRBP-240ENST00000592815 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.77■■□□□ 1.24
CIRBP-240ENST00000592815 AXIN2Q9Y2T1 843 aa22.77■■□□□ 1.24
CIRBP-240ENST00000592815 SLIT3O75094 1523 aa22.77■■□□□ 1.24
CIRBP-240ENST00000592815 ARHGEF25Q86VW2 580 aa22.76■■□□□ 1.23
CIRBP-240ENST00000592815 TOM1L2Q6ZVM7 507 aa22.75■■□□□ 1.23
CIRBP-240ENST00000592815 SLC12A5Q9H2X9 1139 aa22.75■■□□□ 1.23
CIRBP-240ENST00000592815 PIK3C2AO00443 1686 aa22.74■■□□□ 1.23
CIRBP-240ENST00000592815 CRB1P82279 1406 aa22.74■■□□□ 1.23
CIRBP-240ENST00000592815 PSDA5PKW4 1024 aaPredicted RBP22.73■■□□□ 1.23
CIRBP-240ENST00000592815 APBA3O96018 575 aa22.73■■□□□ 1.23
CIRBP-240ENST00000592815 EZH2Q15910 746 aaKnown RBP22.73■■□□□ 1.23
CIRBP-240ENST00000592815 HDGFL2Q7Z4V5 671 aaPredicted RBP22.73■■□□□ 1.23
CIRBP-240ENST00000592815 ST20-MTHFSA0A0A6YYL1 179 aa22.7■■□□□ 1.22
CIRBP-240ENST00000592815 CSB-PGBD3P0DP91 1061 aa22.7■■□□□ 1.22
CIRBP-240ENST00000592815 NME9Q86XW9 330 aa22.7■■□□□ 1.22
CIRBP-240ENST00000592815 CAMKK2Q96RR4 588 aa22.7■■□□□ 1.22
CIRBP-240ENST00000592815 WDR17Q8IZU2 1322 aa22.7■■□□□ 1.22
CIRBP-240ENST00000592815 AKAP12Q02952 1782 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms