RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 CCDC125Q86Z20 511 aa26.55■■□□□ 1.84
CIRBP-237ENST00000592234 NBPF1Q3BBV0 1214 aa26.54■■□□□ 1.84
CIRBP-237ENST00000592234 TOPAZ1Q8N9V7 1692 aa26.54■■□□□ 1.84
CIRBP-237ENST00000592234 SEPT12Q8IYM1 358 aa26.53■■□□□ 1.84
CIRBP-237ENST00000592234 BTG4Q9NY30 223 aa26.51■■□□□ 1.83
CIRBP-237ENST00000592234 ONECUT3O60422 494 aaPredicted RBP26.48■■□□□ 1.83
CIRBP-237ENST00000592234 CCDC61Q9Y6R9 512 aa26.48■■□□□ 1.83
CIRBP-237ENST00000592234 PHRF1Q9P1Y6 1649 aaKnown RBP26.47■■□□□ 1.83
CIRBP-237ENST00000592234 POLR3AO14802 1390 aaPredicted RBP26.46■■□□□ 1.83
CIRBP-237ENST00000592234 ACEP12821 1306 aa26.46■■□□□ 1.83
CIRBP-237ENST00000592234 A0A0G2JS52 829 aa26.46■■□□□ 1.83
CIRBP-237ENST00000592234 MYT1Q01538 1121 aa26.46■■□□□ 1.83
CIRBP-237ENST00000592234 BLMP54132 1417 aaPredicted RBP26.46■■□□□ 1.83
CIRBP-237ENST00000592234 CENPJQ9HC77 1338 aaPredicted RBP26.45■■□□□ 1.83
CIRBP-237ENST00000592234 QRICH2Q9H0J4 1663 aa26.45■■□□□ 1.82
CIRBP-237ENST00000592234 PRDM11Q9NQV5 511 aa26.45■■□□□ 1.82
CIRBP-237ENST00000592234 NBPF8Q3BBV2 869 aa26.44■■□□□ 1.82
CIRBP-237ENST00000592234 KRT27Q7Z3Y8 459 aa26.44■■□□□ 1.82
CIRBP-237ENST00000592234 L3MBTL2Q969R5 705 aa26.44■■□□□ 1.82
CIRBP-237ENST00000592234 PLEKHG3A1L390 1219 aa26.43■■□□□ 1.82
CIRBP-237ENST00000592234 SRPK2P78362 688 aaKnown RBP26.43■■□□□ 1.82
CIRBP-237ENST00000592234 FAM98CQ17RN3 349 aaKnown RBP26.42■■□□□ 1.82
CIRBP-237ENST00000592234 ZRANB1Q9UGI0 708 aa26.42■■□□□ 1.82
CIRBP-237ENST00000592234 NUTM2GQ5VZR2 741 aa26.41■■□□□ 1.82
CIRBP-237ENST00000592234 SIN3AQ96ST3 1273 aa26.41■■□□□ 1.82
CIRBP-237ENST00000592234 SF3B2Q13435 895 aaKnown RBP26.4■■□□□ 1.82
CIRBP-237ENST00000592234 KIAA0232Q92628 1395 aa26.4■■□□□ 1.82
CIRBP-237ENST00000592234 PPIP5K1Q6PFW1 1433 aa26.39■■□□□ 1.82
CIRBP-237ENST00000592234 TRPM1Q7Z4N2 1603 aa26.39■■□□□ 1.82
CIRBP-237ENST00000592234 CABP2Q9NPB3 220 aa26.38■■□□□ 1.81
CIRBP-237ENST00000592234 SPATA31A5Q5VU36 1347 aa26.38■■□□□ 1.81
CIRBP-237ENST00000592234 SPATA31A7Q8IWB4 1347 aa26.38■■□□□ 1.81
CIRBP-237ENST00000592234 ZC3H6P61129 1189 aaKnown RBP26.37■■□□□ 1.81
CIRBP-237ENST00000592234 NEUROD1Q13562 356 aa26.37■■□□□ 1.81
CIRBP-237ENST00000592234 CHRNA2Q15822 529 aa26.37■■□□□ 1.81
CIRBP-237ENST00000592234 ABTB2Q8N961 1025 aa26.37■■□□□ 1.81
CIRBP-237ENST00000592234 DEFB132Q7Z7B7 95 aa26.35■■□□□ 1.81
CIRBP-237ENST00000592234 NRKQ7Z2Y5 1582 aa26.34■■□□□ 1.81
CIRBP-237ENST00000592234 STRN4Q9NRL3 753 aa26.33■■□□□ 1.81
CIRBP-237ENST00000592234 THSD7AQ9UPZ6 1657 aa26.33■■□□□ 1.81
CIRBP-237ENST00000592234 ROCK2O75116 1388 aaKnown RBP26.31■■□□□ 1.8
CIRBP-237ENST00000592234 NLRP13Q86W25 1043 aa26.3■■□□□ 1.8
CIRBP-237ENST00000592234 SPATA31A1Q5TZJ5 1347 aa26.3■■□□□ 1.8
CIRBP-237ENST00000592234 CABP1Q9NZU7 370 aa26.29■■□□□ 1.8
CIRBP-237ENST00000592234 BRD4O60885 1362 aaPredicted RBP26.29■■□□□ 1.8
CIRBP-237ENST00000592234 USP19O94966 1318 aa26.28■■□□□ 1.8
CIRBP-237ENST00000592234 EVC2Q86UK5 1308 aa26.28■■□□□ 1.8
CIRBP-237ENST00000592234 RGPD1P0DJD0 1748 aa26.28■■□□□ 1.8
CIRBP-237ENST00000592234 EVA1CP58658 441 aa26.27■■□□□ 1.8
CIRBP-237ENST00000592234 CPDO75976 1380 aa26.26■■□□□ 1.79
CIRBP-237ENST00000592234 BAG6P46379 1132 aa26.26■■□□□ 1.79
CIRBP-237ENST00000592234 FAM182BQ5T319 152 aa26.26■■□□□ 1.79
CIRBP-237ENST00000592234 SRCAPQ6ZRS2 3230 aa26.26■■□□□ 1.79
CIRBP-237ENST00000592234 LMO7Q8WWI1 1683 aa26.25■■□□□ 1.79
CIRBP-237ENST00000592234 USP6P35125 1406 aa26.25■■□□□ 1.79
CIRBP-237ENST00000592234 SSH2Q76I76 1423 aa26.25■■□□□ 1.79
CIRBP-237ENST00000592234 CAMTA1Q9Y6Y1 1673 aa26.25■■□□□ 1.79
CIRBP-237ENST00000592234 GCP02774 474 aa26.24■■□□□ 1.79
CIRBP-237ENST00000592234 USP35Q9P2H5 1018 aa26.24■■□□□ 1.79
CIRBP-237ENST00000592234 NLRP6P59044 892 aa26.21■■□□□ 1.79
CIRBP-237ENST00000592234 LARP1Q6PKG0 1096 aaKnown RBP26.2■■□□□ 1.78
CIRBP-237ENST00000592234 AKAP12Q02952 1782 aa26.2■■□□□ 1.78
CIRBP-237ENST00000592234 TNS1Q9HBL0 1735 aaKnown RBP26.19■■□□□ 1.78
CIRBP-237ENST00000592234 PIK3C2AO00443 1686 aa26.19■■□□□ 1.78
CIRBP-237ENST00000592234 BARGINQ6ZT62 677 aa26.18■■□□□ 1.78
CIRBP-237ENST00000592234 ZBTB7CA1YPR0 619 aa26.17■■□□□ 1.78
CIRBP-237ENST00000592234 SLIT3O75094 1523 aa26.17■■□□□ 1.78
CIRBP-237ENST00000592234 EN1Q05925 392 aaPredicted RBP26.16■■□□□ 1.78
CIRBP-237ENST00000592234 TCP11L2Q8N4U5 519 aa26.16■■□□□ 1.78
CIRBP-237ENST00000592234 COL5A2P05997 1499 aaPredicted RBP26.16■■□□□ 1.78
CIRBP-237ENST00000592234 TRIM26Q12899 539 aaPredicted RBP26.15■■□□□ 1.78
CIRBP-237ENST00000592234 FAM196AQ6ZSG2 479 aa26.15■■□□□ 1.78
CIRBP-237ENST00000592234 ZNF692Q9BU19 519 aaPredicted RBP26.15■■□□□ 1.78
CIRBP-237ENST00000592234 PDE3BQ13370 1112 aa26.14■■□□□ 1.78
CIRBP-237ENST00000592234 THRAP3Q9Y2W1 955 aaKnown RBP26.13■■□□□ 1.77
CIRBP-237ENST00000592234 AATKQ6ZMQ8 1374 aa26.11■■□□□ 1.77
CIRBP-237ENST00000592234 TONSLQ96HA7 1378 aa26.11■■□□□ 1.77
CIRBP-237ENST00000592234 TRIM37O94972 964 aa26.11■■□□□ 1.77
CIRBP-237ENST00000592234 CARD11Q9BXL7 1154 aa26.11■■□□□ 1.77
CIRBP-237ENST00000592234 DISP2A7MBM2 1401 aa26.11■■□□□ 1.77
CIRBP-237ENST00000592234 TTC21BQ7Z4L5 1316 aa26.11■■□□□ 1.77
CIRBP-237ENST00000592234 PARP4Q9UKK3 1724 aaKnown RBP26.11■■□□□ 1.77
CIRBP-237ENST00000592234 CRB1P82279 1406 aa26.1■■□□□ 1.77
CIRBP-237ENST00000592234 COL18A1P39060 1754 aa26.1■■□□□ 1.77
CIRBP-237ENST00000592234 SBNO2Q9Y2G9 1366 aa26.09■■□□□ 1.77
CIRBP-237ENST00000592234 PSDA5PKW4 1024 aaPredicted RBP26.08■■□□□ 1.77
CIRBP-237ENST00000592234 TTC21AQ8NDW8 1320 aa26.08■■□□□ 1.77
CIRBP-237ENST00000592234 MON2Q7Z3U7 1717 aa26.08■■□□□ 1.76
CIRBP-237ENST00000592234 KTN1Q86UP2 1357 aaKnown RBP26.07■■□□□ 1.76
CIRBP-237ENST00000592234 RGPD5Q99666 1765 aa26.07■■□□□ 1.76
CIRBP-237ENST00000592234 CPSF1Q10570 1443 aaKnown RBP26.07■■□□□ 1.76
CIRBP-237ENST00000592234 EZH2Q15910 746 aaKnown RBP26.06■■□□□ 1.76
CIRBP-237ENST00000592234 KCNH5Q8NCM2 988 aa26.06■■□□□ 1.76
CIRBP-237ENST00000592234 LRP5O75197 1615 aa26.04■■□□□ 1.76
CIRBP-237ENST00000592234 SOX12O15370 315 aa26.04■■□□□ 1.76
CIRBP-237ENST00000592234 APBA3O96018 575 aa26.04■■□□□ 1.76
CIRBP-237ENST00000592234 TOM1L2Q6ZVM7 507 aa26.04■■□□□ 1.76
CIRBP-237ENST00000592234 WNK3Q9BYP7 1800 aa26.03■■□□□ 1.76
CIRBP-237ENST00000592234 ARHGEF25Q86VW2 580 aa26.02■■□□□ 1.76
CIRBP-237ENST00000592234 CAMKK2Q96RR4 588 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms