RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 JDP2Q8WYK2 163 aa14.12□□□□□ -0.15
SEH1L-208ENST00000590843 CCDC43Q96MW1 224 aaKnown RBP14.12□□□□□ -0.15
SEH1L-208ENST00000590843 BCL2L13Q9BXK5 485 aa14.12□□□□□ -0.15
SEH1L-208ENST00000590843 CNNM1Q9NRU3 951 aa14.12□□□□□ -0.15
SEH1L-208ENST00000590843 IFNL2Q8IZJ0 200 aa14.11□□□□□ -0.15
SEH1L-208ENST00000590843 QTRT2Q9H974 415 aaKnown RBP14.11□□□□□ -0.15
SEH1L-208ENST00000590843 MYO1BO43795 1136 aa14.11□□□□□ -0.15
SEH1L-208ENST00000590843 MPRIPQ6WCQ1 1025 aa14.11□□□□□ -0.15
SEH1L-208ENST00000590843 ZNF622Q969S3 477 aaKnown RBP eCLIP14.11□□□□□ -0.15
SEH1L-208ENST00000590843 CCDC27Q2M243 656 aa14.1□□□□□ -0.15
SEH1L-208ENST00000590843 SLF2Q8IX21 1173 aa14.1□□□□□ -0.15
SEH1L-208ENST00000590843 BIVM-ERCC5R4GMW8 1640 aa14.1□□□□□ -0.15
SEH1L-208ENST00000590843 APBA3O96018 575 aa14.1□□□□□ -0.15
SEH1L-208ENST00000590843 APBB1O00213 710 aa14.09□□□□□ -0.15
SEH1L-208ENST00000590843 DUOX2Q9NRD8 1548 aa14.09□□□□□ -0.15
SEH1L-208ENST00000590843 GOLGA6L4A6NEF3 574 aa14.09□□□□□ -0.15
SEH1L-208ENST00000590843 MYBBP1AQ9BQG0 1328 aaKnown RBP14.09□□□□□ -0.15
SEH1L-208ENST00000590843 IKQ13123 557 aaPredicted RBP14.09□□□□□ -0.15
SEH1L-208ENST00000590843 ERICH2A1L162 156 aa14.09□□□□□ -0.15
SEH1L-208ENST00000590843 HDAC9Q9UKV0 1011 aa14.09□□□□□ -0.15
SEH1L-208ENST00000590843 IFIT2P09913 472 aaKnown RBP14.08□□□□□ -0.16
SEH1L-208ENST00000590843 TRDNQ13061 729 aa14.08□□□□□ -0.16
SEH1L-208ENST00000590843 WAPLQ7Z5K2 1190 aa14.08□□□□□ -0.16
SEH1L-208ENST00000590843 HMOX1P09601 288 aa14.07□□□□□ -0.16
SEH1L-208ENST00000590843 RASSF8Q8NHQ8 419 aa14.07□□□□□ -0.16
SEH1L-208ENST00000590843 ZCRB1Q8TBF4 217 aaKnown RBP14.07□□□□□ -0.16
SEH1L-208ENST00000590843 RUNDC1Q96C34 613 aa14.07□□□□□ -0.16
SEH1L-208ENST00000590843 RTCBQ9Y3I0 505 aaKnown RBP14.07□□□□□ -0.16
SEH1L-208ENST00000590843 NINLQ9Y2I6 1382 aa14.07□□□□□ -0.16
SEH1L-208ENST00000590843 IL2RBP14784 551 aa14.07□□□□□ -0.16
SEH1L-208ENST00000590843 APPP05067 770 aa14.07□□□□□ -0.16
SEH1L-208ENST00000590843 KIAA0556O60303 1618 aa14.06□□□□□ -0.16
SEH1L-208ENST00000590843 PPP1R42Q7Z4L9 355 aa14.06□□□□□ -0.16
SEH1L-208ENST00000590843 CCDC87Q9NVE4 849 aa14.06□□□□□ -0.16
SEH1L-208ENST00000590843 MFAP1P55081 439 aaKnown RBP14.06□□□□□ -0.16
SEH1L-208ENST00000590843 RUFY2Q8WXA3 655 aa14.06□□□□□ -0.16
SEH1L-208ENST00000590843 TRIM6-TRIM34B2RNG4 842 aa14.06□□□□□ -0.16
SEH1L-208ENST00000590843 ARHGEF6Q15052 776 aa14.06□□□□□ -0.16
SEH1L-208ENST00000590843 ARAP1Q96P48 1450 aa14.06□□□□□ -0.16
SEH1L-208ENST00000590843 SULT6B1Q6IMI4 303 aa14.06□□□□□ -0.16
SEH1L-208ENST00000590843 NCOA1Q15788 1441 aa14.05□□□□□ -0.16
SEH1L-208ENST00000590843 BTBD11A6QL63 1104 aa14.05□□□□□ -0.16
SEH1L-208ENST00000590843 ZSCAN29Q8IWY8 852 aaPredicted RBP14.05□□□□□ -0.16
SEH1L-208ENST00000590843 R3HCC1Q9Y3T6 440 aaKnown RBP14.05□□□□□ -0.16
SEH1L-208ENST00000590843 FAM196AQ6ZSG2 479 aa14.04□□□□□ -0.16
SEH1L-208ENST00000590843 THOC2Q8NI27 1593 aaKnown RBP14.04□□□□□ -0.16
SEH1L-208ENST00000590843 PHF14O94880 888 aa14.04□□□□□ -0.16
SEH1L-208ENST00000590843 TTC21BQ7Z4L5 1316 aa14.04□□□□□ -0.16
SEH1L-208ENST00000590843 CCDC57Q2TAC2 916 aa14.04□□□□□ -0.16
SEH1L-208ENST00000590843 SAMD1Q6SPF0 538 aaPredicted RBP14.04□□□□□ -0.16
SEH1L-208ENST00000590843 DDX46Q7L014 1031 aaKnown RBP14.04□□□□□ -0.16
SEH1L-208ENST00000590843 TRPM2O94759 1503 aa14.04□□□□□ -0.16
SEH1L-208ENST00000590843 NPHP4O75161 1426 aaPredicted RBP14.04□□□□□ -0.16
SEH1L-208ENST00000590843 GOLGA6L6A8MZA4 724 aa14.03□□□□□ -0.16
SEH1L-208ENST00000590843 PLIN1O60240 522 aa14.03□□□□□ -0.16
SEH1L-208ENST00000590843 NYXQ9GZU5 481 aa14.03□□□□□ -0.16
SEH1L-208ENST00000590843 BTG4Q9NY30 223 aa14.03□□□□□ -0.16
SEH1L-208ENST00000590843 E9PSI1 815 aa14.03□□□□□ -0.16
SEH1L-208ENST00000590843 DPY19L2Q6NUT2 758 aa14.03□□□□□ -0.16
SEH1L-208ENST00000590843 ATF7IPQ6VMQ6 1270 aa14.03□□□□□ -0.16
SEH1L-208ENST00000590843 ANKRD24Q8TF21 1146 aa14.03□□□□□ -0.16
SEH1L-208ENST00000590843 FMNL2Q96PY5 1086 aa14.03□□□□□ -0.16
SEH1L-208ENST00000590843 CHAF1AQ13111 956 aaPredicted RBP14.03□□□□□ -0.16
SEH1L-208ENST00000590843 NRDCO43847 1150 aa14.02□□□□□ -0.17
SEH1L-208ENST00000590843 TCP11L2Q8N4U5 519 aa14.02□□□□□ -0.17
SEH1L-208ENST00000590843 GNAT3A8MTJ3 354 aa14.02□□□□□ -0.17
SEH1L-208ENST00000590843 ELL2O00472 640 aaPredicted RBP14.02□□□□□ -0.17
SEH1L-208ENST00000590843 CHRNA2Q15822 529 aa14.02□□□□□ -0.17
SEH1L-208ENST00000590843 FBXO41Q8TF61 875 aa14.02□□□□□ -0.17
SEH1L-208ENST00000590843 NECTIN2Q92692 538 aa14.02□□□□□ -0.17
SEH1L-208ENST00000590843 HDGFL1Q5TGJ6 251 aa14.01□□□□□ -0.17
SEH1L-208ENST00000590843 CCDC146Q8IYE0 955 aa14.01□□□□□ -0.17
SEH1L-208ENST00000590843 PTCD1O75127 700 aaKnown RBP14.01□□□□□ -0.17
SEH1L-208ENST00000590843 CCDC158Q5M9N0 1113 aa14.01□□□□□ -0.17
SEH1L-208ENST00000590843 ANKIB1Q9P2G1 1089 aa14.01□□□□□ -0.17
SEH1L-208ENST00000590843 CCDC7Q96M83 1385 aa14.01□□□□□ -0.17
SEH1L-208ENST00000590843 NEUROD6Q96NK8 337 aa14.01□□□□□ -0.17
SEH1L-208ENST00000590843 ERC2O15083 957 aa14.01□□□□□ -0.17
SEH1L-208ENST00000590843 SETDB2Q96T68 719 aa14.01□□□□□ -0.17
SEH1L-208ENST00000590843 WASHC4Q2M389 1173 aa14□□□□□ -0.17
SEH1L-208ENST00000590843 CCER2I3L3R5 266 aa14□□□□□ -0.17
SEH1L-208ENST00000590843 GNAI3P08754 354 aa14□□□□□ -0.17
SEH1L-208ENST00000590843 NBPF6Q5VWK0 638 aa14□□□□□ -0.17
SEH1L-208ENST00000590843 NBPF5PQ86XG9 351 aaPredicted RBP14□□□□□ -0.17
SEH1L-208ENST00000590843 OGFOD1Q8N543 542 aa14□□□□□ -0.17
SEH1L-208ENST00000590843 AIDAQ96BJ3 306 aa14□□□□□ -0.17
SEH1L-208ENST00000590843 NBPF4Q96M43 638 aa14□□□□□ -0.17
SEH1L-208ENST00000590843 EYA3Q99504 573 aa14□□□□□ -0.17
SEH1L-208ENST00000590843 PDE6BP35913 854 aa14□□□□□ -0.17
SEH1L-208ENST00000590843 ZNF287Q9HBT7 754 aa14□□□□□ -0.17
SEH1L-208ENST00000590843 TIAM1Q13009 1591 aa14□□□□□ -0.17
SEH1L-208ENST00000590843 CAVIN4Q5BKX8 364 aa14□□□□□ -0.17
SEH1L-208ENST00000590843 UBTFL1P0CB47 393 aaPredicted RBP13.99□□□□□ -0.17
SEH1L-208ENST00000590843 ATP6V1AP38606 617 aa13.99□□□□□ -0.17
SEH1L-208ENST00000590843 CDC5LQ99459 802 aaKnown RBP13.99□□□□□ -0.17
SEH1L-208ENST00000590843 MPHOSPH6Q99547 160 aaKnown RBP13.99□□□□□ -0.17
SEH1L-208ENST00000590843 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.99□□□□□ -0.17
SEH1L-208ENST00000590843 GPATCH8Q9UKJ3 1502 aaKnown RBP13.99□□□□□ -0.17
SEH1L-208ENST00000590843 ITSN2Q9NZM3 1697 aa13.99□□□□□ -0.17
SEH1L-208ENST00000590843 TCERG1O14776 1098 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms