RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 PLEKHG3A1L390 1219 aa29.47■■■□□ 2.31
CIRBP-226ENST00000590171 CABP2Q9NPB3 220 aa29.47■■■□□ 2.31
CIRBP-226ENST00000590171 UNC5CLQ8IV45 518 aa29.46■■■□□ 2.31
CIRBP-226ENST00000590171 UPF1Q92900 1129 aaKnown RBP eCLIP29.44■■■□□ 2.3
CIRBP-226ENST00000590171 PPIP5K1Q6PFW1 1433 aa29.44■■■□□ 2.3
CIRBP-226ENST00000590171 CRYBG1Q9Y4K1 1723 aa29.43■■■□□ 2.3
CIRBP-226ENST00000590171 GJD4Q96KN9 370 aaPredicted RBP29.43■■■□□ 2.3
CIRBP-226ENST00000590171 PLCH1Q4KWH8 1693 aa29.43■■■□□ 2.3
CIRBP-226ENST00000590171 FAM83GA6ND36 823 aa29.4■■■□□ 2.3
CIRBP-226ENST00000590171 RALGAPBQ86X10 1494 aa29.39■■■□□ 2.3
CIRBP-226ENST00000590171 NWD2Q9ULI1 1742 aa29.39■■■□□ 2.3
CIRBP-226ENST00000590171 GLI3P10071 1580 aa29.39■■■□□ 2.29
CIRBP-226ENST00000590171 EVC2Q86UK5 1308 aa29.38■■■□□ 2.29
CIRBP-226ENST00000590171 CARD11Q9BXL7 1154 aa29.36■■■□□ 2.29
CIRBP-226ENST00000590171 VPS72Q15906 364 aa29.34■■■□□ 2.29
CIRBP-226ENST00000590171 NUTM2GQ5VZR2 741 aa29.34■■■□□ 2.29
CIRBP-226ENST00000590171 CABP1Q9NZU7 370 aa29.34■■■□□ 2.29
CIRBP-226ENST00000590171 PHRF1Q9P1Y6 1649 aaKnown RBP29.34■■■□□ 2.29
CIRBP-226ENST00000590171 COL14A1Q05707 1796 aaKnown RBP29.33■■■□□ 2.29
CIRBP-226ENST00000590171 NRAPQ86VF7 1730 aa29.31■■■□□ 2.28
CIRBP-226ENST00000590171 BTG4Q9NY30 223 aa29.31■■■□□ 2.28
CIRBP-226ENST00000590171 ATAD2Q6PL18 1390 aa29.3■■■□□ 2.28
CIRBP-226ENST00000590171 SBNO2Q9Y2G9 1366 aa29.3■■■□□ 2.28
CIRBP-226ENST00000590171 USP6P35125 1406 aa29.29■■■□□ 2.28
CIRBP-226ENST00000590171 ABTB2Q8N961 1025 aa29.29■■■□□ 2.28
CIRBP-226ENST00000590171 PRDM11Q9NQV5 511 aa29.29■■■□□ 2.28
CIRBP-226ENST00000590171 CCDC9Q9Y3X0 531 aaKnown RBP29.28■■■□□ 2.28
CIRBP-226ENST00000590171 BRD4O60885 1362 aaPredicted RBP29.27■■■□□ 2.28
CIRBP-226ENST00000590171 KIAA0232Q92628 1395 aa29.27■■■□□ 2.28
CIRBP-226ENST00000590171 NRKQ7Z2Y5 1582 aa29.26■■■□□ 2.28
CIRBP-226ENST00000590171 USP19O94966 1318 aa29.25■■■□□ 2.27
CIRBP-226ENST00000590171 SSH2Q76I76 1423 aa29.23■■■□□ 2.27
CIRBP-226ENST00000590171 ZC3H6P61129 1189 aaKnown RBP29.23■■■□□ 2.27
CIRBP-226ENST00000590171 CHRNA2Q15822 529 aa29.23■■■□□ 2.27
CIRBP-226ENST00000590171 NLRP13Q86W25 1043 aa29.21■■■□□ 2.27
CIRBP-226ENST00000590171 SEPT12Q8IYM1 358 aa29.21■■■□□ 2.27
CIRBP-226ENST00000590171 ONECUT3O60422 494 aaPredicted RBP29.2■■■□□ 2.26
CIRBP-226ENST00000590171 CPDO75976 1380 aa29.17■■■□□ 2.26
CIRBP-226ENST00000590171 CPSF1Q10570 1443 aaKnown RBP29.17■■■□□ 2.26
CIRBP-226ENST00000590171 PIK3C2AO00443 1686 aa29.16■■■□□ 2.26
CIRBP-226ENST00000590171 GCP02774 474 aa29.16■■■□□ 2.26
CIRBP-226ENST00000590171 ZNF692Q9BU19 519 aaPredicted RBP29.16■■■□□ 2.26
CIRBP-226ENST00000590171 SPATA31A5Q5VU36 1347 aa29.16■■■□□ 2.26
CIRBP-226ENST00000590171 SPATA31A7Q8IWB4 1347 aa29.16■■■□□ 2.26
CIRBP-226ENST00000590171 AKAP12Q02952 1782 aa29.16■■■□□ 2.26
CIRBP-226ENST00000590171 BRWD3Q6RI45 1802 aa29.15■■■□□ 2.26
CIRBP-226ENST00000590171 NLRP6P59044 892 aa29.15■■■□□ 2.26
CIRBP-226ENST00000590171 FAM98CQ17RN3 349 aaKnown RBP29.15■■■□□ 2.26
CIRBP-226ENST00000590171 PCGF6Q9BYE7 350 aa29.15■■■□□ 2.26
CIRBP-226ENST00000590171 SLIT3O75094 1523 aa29.15■■■□□ 2.26
CIRBP-226ENST00000590171 TTC21BQ7Z4L5 1316 aa29.14■■■□□ 2.25
CIRBP-226ENST00000590171 LMO7Q8WWI1 1683 aa29.12■■■□□ 2.25
CIRBP-226ENST00000590171 STRN4Q9NRL3 753 aa29.12■■■□□ 2.25
CIRBP-226ENST00000590171 KTN1Q86UP2 1357 aaKnown RBP29.12■■■□□ 2.25
CIRBP-226ENST00000590171 CAMTA1Q9Y6Y1 1673 aa29.12■■■□□ 2.25
CIRBP-226ENST00000590171 A0A0G2JS52 829 aa29.11■■■□□ 2.25
CIRBP-226ENST00000590171 MYT1Q01538 1121 aa29.11■■■□□ 2.25
CIRBP-226ENST00000590171 ST20-MTHFSA0A0A6YYL1 179 aa29.1■■■□□ 2.25
CIRBP-226ENST00000590171 TESK2Q96S53 571 aa29.1■■■□□ 2.25
CIRBP-226ENST00000590171 CLSPNQ9HAW4 1339 aa29.1■■■□□ 2.25
CIRBP-226ENST00000590171 CD163L1Q9NR16 1453 aa29.1■■■□□ 2.25
CIRBP-226ENST00000590171 KRT27Q7Z3Y8 459 aa29.09■■■□□ 2.25
CIRBP-226ENST00000590171 SPATA31A1Q5TZJ5 1347 aa29.09■■■□□ 2.25
CIRBP-226ENST00000590171 TTC21AQ8NDW8 1320 aa29.09■■■□□ 2.25
CIRBP-226ENST00000590171 MON2Q7Z3U7 1717 aa29.08■■■□□ 2.25
CIRBP-226ENST00000590171 EP400Q96L91 3159 aa29.07■■■□□ 2.24
CIRBP-226ENST00000590171 THSD7AQ9UPZ6 1657 aa29.06■■■□□ 2.24
CIRBP-226ENST00000590171 TMC1Q8TDI8 760 aa29.06■■■□□ 2.24
CIRBP-226ENST00000590171 EVA1CP58658 441 aa29.05■■■□□ 2.24
CIRBP-226ENST00000590171 CCDC125Q86Z20 511 aa29.05■■■□□ 2.24
CIRBP-226ENST00000590171 PUS7Q96PZ0 661 aaKnown RBP29.05■■■□□ 2.24
CIRBP-226ENST00000590171 SLC12A5Q9H2X9 1139 aa29.05■■■□□ 2.24
CIRBP-226ENST00000590171 TIMELESSQ9UNS1 1208 aa29.04■■■□□ 2.24
CIRBP-226ENST00000590171 ZBTB7CA1YPR0 619 aa29.03■■■□□ 2.24
CIRBP-226ENST00000590171 LARP1Q6PKG0 1096 aaKnown RBP29.03■■■□□ 2.24
CIRBP-226ENST00000590171 COL5A2P05997 1499 aaPredicted RBP29.03■■■□□ 2.24
CIRBP-226ENST00000590171 BLMP54132 1417 aaPredicted RBP29.03■■■□□ 2.24
CIRBP-226ENST00000590171 USP47Q96K76 1375 aa29.02■■■□□ 2.24
CIRBP-226ENST00000590171 AATKQ6ZMQ8 1374 aa29.01■■■□□ 2.24
CIRBP-226ENST00000590171 HDGFL2Q7Z4V5 671 aaPredicted RBP29■■■□□ 2.23
CIRBP-226ENST00000590171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29■■■□□ 2.23
CIRBP-226ENST00000590171 USP35Q9P2H5 1018 aa29■■■□□ 2.23
CIRBP-226ENST00000590171 A0A1W2PP64 1363 aa29■■■□□ 2.23
CIRBP-226ENST00000590171 KCNH5Q8NCM2 988 aa28.99■■■□□ 2.23
CIRBP-226ENST00000590171 ZRANB1Q9UGI0 708 aa28.98■■■□□ 2.23
CIRBP-226ENST00000590171 SOX12O15370 315 aa28.97■■■□□ 2.23
CIRBP-226ENST00000590171 SLC24A1O60721 1099 aa28.97■■■□□ 2.23
CIRBP-226ENST00000590171 TERF2IPQ9NYB0 399 aa28.97■■■□□ 2.23
CIRBP-226ENST00000590171 USP31Q70CQ4 1352 aa28.97■■■□□ 2.23
CIRBP-226ENST00000590171 EDC4Q6P2E9 1401 aaKnown RBP28.96■■■□□ 2.23
CIRBP-226ENST00000590171 COL18A1P39060 1754 aa28.96■■■□□ 2.23
CIRBP-226ENST00000590171 NFAT5O94916 1531 aa28.96■■■□□ 2.23
CIRBP-226ENST00000590171 BARGINQ6ZT62 677 aa28.96■■■□□ 2.23
CIRBP-226ENST00000590171 ARHGEF25Q86VW2 580 aa28.96■■■□□ 2.23
CIRBP-226ENST00000590171 NME9Q86XW9 330 aa28.96■■■□□ 2.23
CIRBP-226ENST00000590171 FAM182BQ5T319 152 aa28.95■■■□□ 2.22
CIRBP-226ENST00000590171 NINLQ9Y2I6 1382 aa28.95■■■□□ 2.22
CIRBP-226ENST00000590171 USP54Q70EL1 1684 aa28.94■■■□□ 2.22
CIRBP-226ENST00000590171 TCP11L2Q8N4U5 519 aa28.94■■■□□ 2.22
CIRBP-226ENST00000590171 CRB1P82279 1406 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms