RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 PRR36Q9H6K5 1346 aa19.16■□□□□ 0.66
PRKCSH-210ENST00000589990 CAMKK2Q96RR4 588 aa19.15■□□□□ 0.66
PRKCSH-210ENST00000589990 DHX57Q6P158 1386 aaKnown RBP19.15■□□□□ 0.66
PRKCSH-210ENST00000589990 ANKARQ7Z5J8 1434 aa19.15■□□□□ 0.66
PRKCSH-210ENST00000589990 ADGRB2O60241 1585 aa19.15■□□□□ 0.66
PRKCSH-210ENST00000589990 TRIM37O94972 964 aa19.14■□□□□ 0.65
PRKCSH-210ENST00000589990 ACIN1Q9UKV3 1341 aaKnown RBP19.12■□□□□ 0.65
PRKCSH-210ENST00000589990 POGKQ9P215 609 aa19.12■□□□□ 0.65
PRKCSH-210ENST00000589990 DLC1Q96QB1 1528 aa19.11■□□□□ 0.65
PRKCSH-210ENST00000589990 MINK1Q8N4C8 1332 aaPredicted RBP19.1■□□□□ 0.65
PRKCSH-210ENST00000589990 CHRNA2Q15822 529 aa19.1■□□□□ 0.65
PRKCSH-210ENST00000589990 ADGRB1O14514 1584 aa19.1■□□□□ 0.65
PRKCSH-210ENST00000589990 NUP188Q5SRE5 1749 aa19.09■□□□□ 0.65
PRKCSH-210ENST00000589990 SPATA31A1Q5TZJ5 1347 aa19.09■□□□□ 0.65
PRKCSH-210ENST00000589990 RREB1Q92766 1687 aa19.09■□□□□ 0.65
PRKCSH-210ENST00000589990 PRDM11Q9NQV5 511 aa19.09■□□□□ 0.65
PRKCSH-210ENST00000589990 GPRASP1Q5JY77 1395 aa19.08■□□□□ 0.65
PRKCSH-210ENST00000589990 KIAA0232Q92628 1395 aa19.08■□□□□ 0.65
PRKCSH-210ENST00000589990 TRAK1Q9UPV9 953 aa19.08■□□□□ 0.64
PRKCSH-210ENST00000589990 TULP4Q9NRJ4 1543 aa19.07■□□□□ 0.64
PRKCSH-210ENST00000589990 PAK3O75914 559 aaPredicted RBP19.07■□□□□ 0.64
PRKCSH-210ENST00000589990 APBA3O96018 575 aa19.07■□□□□ 0.64
PRKCSH-210ENST00000589990 YY1P25490 414 aa19.07■□□□□ 0.64
PRKCSH-210ENST00000589990 STRN4Q9NRL3 753 aa19.07■□□□□ 0.64
PRKCSH-210ENST00000589990 PHRF1Q9P1Y6 1649 aaKnown RBP19.07■□□□□ 0.64
PRKCSH-210ENST00000589990 FAM196AQ6ZSG2 479 aa19.05■□□□□ 0.64
PRKCSH-210ENST00000589990 USP35Q9P2H5 1018 aa19.05■□□□□ 0.64
PRKCSH-210ENST00000589990 NUTM2GQ5VZR2 741 aa19.04■□□□□ 0.64
PRKCSH-210ENST00000589990 NGDNQ8NEJ9 315 aaKnown RBP19.04■□□□□ 0.64
PRKCSH-210ENST00000589990 WASLO00401 505 aaPredicted RBP19.03■□□□□ 0.64
PRKCSH-210ENST00000589990 ZC3H6P61129 1189 aaKnown RBP19.03■□□□□ 0.64
PRKCSH-210ENST00000589990 PARD3Q8TEW0 1356 aa19■□□□□ 0.63
PRKCSH-210ENST00000589990 ATP7BP35670 1465 aa19■□□□□ 0.63
PRKCSH-210ENST00000589990 CAMTA1Q9Y6Y1 1673 aa19■□□□□ 0.63
PRKCSH-210ENST00000589990 SSH2Q76I76 1423 aa18.99■□□□□ 0.63
PRKCSH-210ENST00000589990 LARP1Q6PKG0 1096 aaKnown RBP18.98■□□□□ 0.63
PRKCSH-210ENST00000589990 EIF3AQ14152 1382 aaKnown RBP18.97■□□□□ 0.63
PRKCSH-210ENST00000589990 PDE3BQ13370 1112 aa18.96■□□□□ 0.63
PRKCSH-210ENST00000589990 NRKQ7Z2Y5 1582 aa18.96■□□□□ 0.63
PRKCSH-210ENST00000589990 ITSN1Q15811 1721 aa18.96■□□□□ 0.63
PRKCSH-210ENST00000589990 LMO7Q8WWI1 1683 aa18.95■□□□□ 0.62
PRKCSH-210ENST00000589990 ARHGEF28Q8N1W1 1705 aaKnown RBP18.95■□□□□ 0.62
PRKCSH-210ENST00000589990 BARGINQ6ZT62 677 aa18.95■□□□□ 0.62
PRKCSH-210ENST00000589990 NUDT16Q96DE0 195 aaKnown RBP18.95■□□□□ 0.62
PRKCSH-210ENST00000589990 KDM2AQ9Y2K7 1162 aa18.95■□□□□ 0.62
PRKCSH-210ENST00000589990 KCNQ2O43526 872 aa18.93■□□□□ 0.62
PRKCSH-210ENST00000589990 EVA1CP58658 441 aa18.93■□□□□ 0.62
PRKCSH-210ENST00000589990 NBPF8Q3BBV2 869 aa18.93■□□□□ 0.62
PRKCSH-210ENST00000589990 NBPF14Q5TI25 921 aa18.93■□□□□ 0.62
PRKCSH-210ENST00000589990 SPON1Q9HCB6 807 aa18.93■□□□□ 0.62
PRKCSH-210ENST00000589990 PPP1R1BQ9UD71 204 aaPredicted RBP18.93■□□□□ 0.62
PRKCSH-210ENST00000589990 UTRNP46939 3433 aa18.92■□□□□ 0.62
PRKCSH-210ENST00000589990 PDGFDQ9GZP0 370 aaPredicted RBP18.92■□□□□ 0.62
PRKCSH-210ENST00000589990 TOPAZ1Q8N9V7 1692 aa18.92■□□□□ 0.62
PRKCSH-210ENST00000589990 PTF1AQ7RTS3 328 aa18.91■□□□□ 0.62
PRKCSH-210ENST00000589990 TCP11L2Q8N4U5 519 aa18.91■□□□□ 0.62
PRKCSH-210ENST00000589990 PEAK1Q9H792 1746 aa18.91■□□□□ 0.62
PRKCSH-210ENST00000589990 PARP4Q9UKK3 1724 aaKnown RBP18.91■□□□□ 0.62
PRKCSH-210ENST00000589990 ANO8Q9HCE9 1232 aaPredicted RBP18.9■□□□□ 0.62
PRKCSH-210ENST00000589990 ACEP12821 1306 aa18.9■□□□□ 0.62
PRKCSH-210ENST00000589990 CASZ1Q86V15 1759 aa18.89■□□□□ 0.61
PRKCSH-210ENST00000589990 DCAF11Q8TEB1 546 aa18.89■□□□□ 0.61
PRKCSH-210ENST00000589990 CDK19Q9BWU1 502 aa18.89■□□□□ 0.61
PRKCSH-210ENST00000589990 POLR3AO14802 1390 aaPredicted RBP18.89■□□□□ 0.61
PRKCSH-210ENST00000589990 NINLQ9Y2I6 1382 aa18.89■□□□□ 0.61
PRKCSH-210ENST00000589990 SBF2Q86WG5 1849 aa18.88■□□□□ 0.61
PRKCSH-210ENST00000589990 COL5A2P05997 1499 aaPredicted RBP18.87■□□□□ 0.61
PRKCSH-210ENST00000589990 CPDO75976 1380 aa18.86■□□□□ 0.61
PRKCSH-210ENST00000589990 USP19O94966 1318 aa18.86■□□□□ 0.61
PRKCSH-210ENST00000589990 ABTB2Q8N961 1025 aa18.86■□□□□ 0.61
PRKCSH-210ENST00000589990 MYOM1P52179 1685 aa18.85■□□□□ 0.61
PRKCSH-210ENST00000589990 LRRC37A3O60309 1634 aa18.85■□□□□ 0.61
PRKCSH-210ENST00000589990 RGPD3A6NKT7 1758 aaPredicted RBP18.83■□□□□ 0.61
PRKCSH-210ENST00000589990 RGPD4Q7Z3J3 1758 aa18.83■□□□□ 0.61
PRKCSH-210ENST00000589990 ZBTB7AO95365 584 aa18.83■□□□□ 0.6
PRKCSH-210ENST00000589990 PROM2Q8N271 834 aa18.83■□□□□ 0.6
PRKCSH-210ENST00000589990 OVOS2A0A0G2JMS6 1433 aa18.83■□□□□ 0.6
PRKCSH-210ENST00000589990 OVOS2A0A0J9YW53 1432 aa18.83■□□□□ 0.6
PRKCSH-210ENST00000589990 OVOS2Q6IE36 1432 aa18.83■□□□□ 0.6
PRKCSH-210ENST00000589990 PLEKHG3A1L390 1219 aa18.82■□□□□ 0.6
PRKCSH-210ENST00000589990 GCP02774 474 aa18.82■□□□□ 0.6
PRKCSH-210ENST00000589990 THRAP3Q9Y2W1 955 aaKnown RBP18.82■□□□□ 0.6
PRKCSH-210ENST00000589990 CCDC61Q9Y6R9 512 aa18.82■□□□□ 0.6
PRKCSH-210ENST00000589990 RAB3GAP2Q9H2M9 1393 aa18.81■□□□□ 0.6
PRKCSH-210ENST00000589990 ZBTB7CA1YPR0 619 aa18.81■□□□□ 0.6
PRKCSH-210ENST00000589990 CRB1P82279 1406 aa18.81■□□□□ 0.6
PRKCSH-210ENST00000589990 DCAF8L1A6NGE4 600 aa18.8■□□□□ 0.6
PRKCSH-210ENST00000589990 PTGER2P43116 358 aa18.8■□□□□ 0.6
PRKCSH-210ENST00000589990 ZNF784Q8NCA9 323 aaPredicted RBP18.8■□□□□ 0.6
PRKCSH-210ENST00000589990 PLSCR1O15162 318 aa18.79■□□□□ 0.6
PRKCSH-210ENST00000589990 ATF5Q9Y2D1 282 aaPredicted RBP18.79■□□□□ 0.6
PRKCSH-210ENST00000589990 WNK3Q9BYP7 1800 aa18.78■□□□□ 0.6
PRKCSH-210ENST00000589990 MARCH10Q8NA82 808 aaPredicted RBP18.77■□□□□ 0.6
PRKCSH-210ENST00000589990 PPIP5K1Q6PFW1 1433 aa18.76■□□□□ 0.59
PRKCSH-210ENST00000589990 COL18A1P39060 1754 aa18.76■□□□□ 0.59
PRKCSH-210ENST00000589990 DDB1Q16531 1140 aa18.76■□□□□ 0.59
PRKCSH-210ENST00000589990 NLRP13Q86W25 1043 aa18.76■□□□□ 0.59
PRKCSH-210ENST00000589990 BCL11BQ9C0K0 894 aaPredicted RBP18.76■□□□□ 0.59
PRKCSH-210ENST00000589990 AXIN2Q9Y2T1 843 aa18.75■□□□□ 0.59
PRKCSH-210ENST00000589990 CABP2Q9NPB3 220 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms