RNA–Protein interactions for RNA: ENST00000589925.1

SAFB2-204, Transcript of scaffold attachment factor B2, humanhuman

TSL 3

Gene SAFB2, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-204ENST00000589925 BCL9LQ86UU0 1499 aa23.75■■□□□ 1.39
SAFB2-204ENST00000589925 PLEKHG5O94827 1062 aa23.75■■□□□ 1.39
SAFB2-204ENST00000589925 HAP1P54257 671 aaPredicted RBP23.75■■□□□ 1.39
SAFB2-204ENST00000589925 ATAD2Q6PL18 1390 aa23.75■■□□□ 1.39
SAFB2-204ENST00000589925 ST20-MTHFSA0A0A6YYL1 179 aa23.74■■□□□ 1.39
SAFB2-204ENST00000589925 TESK2Q96S53 571 aa23.74■■□□□ 1.39
SAFB2-204ENST00000589925 QTRT2Q9H974 415 aaKnown RBP23.74■■□□□ 1.39
SAFB2-204ENST00000589925 SLIT2O94813 1529 aa23.74■■□□□ 1.39
SAFB2-204ENST00000589925 CRYBG1Q9Y4K1 1723 aa23.73■■□□□ 1.39
SAFB2-204ENST00000589925 RXRBP28702 533 aa23.73■■□□□ 1.39
SAFB2-204ENST00000589925 USP6P35125 1406 aa23.73■■□□□ 1.39
SAFB2-204ENST00000589925 BRD4O60885 1362 aaPredicted RBP23.72■■□□□ 1.39
SAFB2-204ENST00000589925 USP47Q96K76 1375 aa23.72■■□□□ 1.39
SAFB2-204ENST00000589925 ATRNO75882 1429 aa23.7■■□□□ 1.38
SAFB2-204ENST00000589925 SSH2Q76I76 1423 aa23.7■■□□□ 1.38
SAFB2-204ENST00000589925 CDK12Q9NYV4 1490 aaPredicted RBP23.69■■□□□ 1.38
SAFB2-204ENST00000589925 RBM6P78332 1123 aaKnown RBP23.69■■□□□ 1.38
SAFB2-204ENST00000589925 TRPC5Q9UL62 973 aaPredicted RBP23.69■■□□□ 1.38
SAFB2-204ENST00000589925 CPSF1Q10570 1443 aaKnown RBP23.68■■□□□ 1.38
SAFB2-204ENST00000589925 FAM83GA6ND36 823 aa23.67■■□□□ 1.38
SAFB2-204ENST00000589925 NUTM2GQ5VZR2 741 aa23.67■■□□□ 1.38
SAFB2-204ENST00000589925 ABTB2Q8N961 1025 aa23.67■■□□□ 1.38
SAFB2-204ENST00000589925 PUS7Q96PZ0 661 aaKnown RBP23.67■■□□□ 1.38
SAFB2-204ENST00000589925 UNC5CLQ8IV45 518 aa23.66■■□□□ 1.38
SAFB2-204ENST00000589925 ZNF692Q9BU19 519 aaPredicted RBP23.66■■□□□ 1.38
SAFB2-204ENST00000589925 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.66■■□□□ 1.38
SAFB2-204ENST00000589925 PHRF1Q9P1Y6 1649 aaKnown RBP23.66■■□□□ 1.38
SAFB2-204ENST00000589925 SLC24A1O60721 1099 aa23.65■■□□□ 1.38
SAFB2-204ENST00000589925 USP19O94966 1318 aa23.64■■□□□ 1.38
SAFB2-204ENST00000589925 PLCH1Q4KWH8 1693 aa23.64■■□□□ 1.38
SAFB2-204ENST00000589925 CD163L1Q9NR16 1453 aa23.64■■□□□ 1.38
SAFB2-204ENST00000589925 RGS12O14924 1447 aa23.64■■□□□ 1.37
SAFB2-204ENST00000589925 AKAP12Q02952 1782 aa23.63■■□□□ 1.37
SAFB2-204ENST00000589925 NWD2Q9ULI1 1742 aa23.62■■□□□ 1.37
SAFB2-204ENST00000589925 NRKQ7Z2Y5 1582 aa23.62■■□□□ 1.37
SAFB2-204ENST00000589925 COL14A1Q05707 1796 aaKnown RBP23.61■■□□□ 1.37
SAFB2-204ENST00000589925 KTN1Q86UP2 1357 aaKnown RBP23.61■■□□□ 1.37
SAFB2-204ENST00000589925 KIAA0232Q92628 1395 aa23.61■■□□□ 1.37
SAFB2-204ENST00000589925 PIK3C2AO00443 1686 aa23.6■■□□□ 1.37
SAFB2-204ENST00000589925 TTC21BQ7Z4L5 1316 aa23.6■■□□□ 1.37
SAFB2-204ENST00000589925 NLRP13Q86W25 1043 aa23.6■■□□□ 1.37
SAFB2-204ENST00000589925 TMC1Q8TDI8 760 aa23.6■■□□□ 1.37
SAFB2-204ENST00000589925 GJD4Q96KN9 370 aaPredicted RBP23.6■■□□□ 1.37
SAFB2-204ENST00000589925 SLC12A5Q9H2X9 1139 aa23.6■■□□□ 1.37
SAFB2-204ENST00000589925 PRDM11Q9NQV5 511 aa23.59■■□□□ 1.37
SAFB2-204ENST00000589925 NINLQ9Y2I6 1382 aa23.58■■□□□ 1.37
SAFB2-204ENST00000589925 TMF1P82094 1093 aa23.58■■□□□ 1.37
SAFB2-204ENST00000589925 BTG4Q9NY30 223 aa23.58■■□□□ 1.37
SAFB2-204ENST00000589925 MON2Q7Z3U7 1717 aa23.58■■□□□ 1.37
SAFB2-204ENST00000589925 TTC21AQ8NDW8 1320 aa23.58■■□□□ 1.36
SAFB2-204ENST00000589925 NRAPQ86VF7 1730 aa23.57■■□□□ 1.36
SAFB2-204ENST00000589925 GCP02774 474 aa23.57■■□□□ 1.36
SAFB2-204ENST00000589925 NLRP6P59044 892 aa23.57■■□□□ 1.36
SAFB2-204ENST00000589925 VPS72Q15906 364 aa23.57■■□□□ 1.36
SAFB2-204ENST00000589925 GLI3P10071 1580 aa23.57■■□□□ 1.36
SAFB2-204ENST00000589925 A0A1W2PP64 1363 aa23.56■■□□□ 1.36
SAFB2-204ENST00000589925 CPDO75976 1380 aa23.56■■□□□ 1.36
SAFB2-204ENST00000589925 SLIT3O75094 1523 aa23.56■■□□□ 1.36
SAFB2-204ENST00000589925 ZC3H6P61129 1189 aaKnown RBP23.56■■□□□ 1.36
SAFB2-204ENST00000589925 CHRNA2Q15822 529 aa23.54■■□□□ 1.36
SAFB2-204ENST00000589925 HDGFL2Q7Z4V5 671 aaPredicted RBP23.54■■□□□ 1.36
SAFB2-204ENST00000589925 TERF2IPQ9NYB0 399 aa23.54■■□□□ 1.36
SAFB2-204ENST00000589925 EDC4Q6P2E9 1401 aaKnown RBP23.52■■□□□ 1.36
SAFB2-204ENST00000589925 EP400Q96L91 3159 aa23.52■■□□□ 1.36
SAFB2-204ENST00000589925 CDCA8Q53HL2 280 aa23.5■■□□□ 1.35
SAFB2-204ENST00000589925 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.5■■□□□ 1.35
SAFB2-204ENST00000589925 LMO7Q8WWI1 1683 aa23.5■■□□□ 1.35
SAFB2-204ENST00000589925 USP31Q70CQ4 1352 aa23.49■■□□□ 1.35
SAFB2-204ENST00000589925 CCDC9Q9Y3X0 531 aaKnown RBP23.48■■□□□ 1.35
SAFB2-204ENST00000589925 ANKRD36BQ8N2N9 1353 aa23.48■■□□□ 1.35
SAFB2-204ENST00000589925 CAMTA1Q9Y6Y1 1673 aa23.48■■□□□ 1.35
SAFB2-204ENST00000589925 ONECUT3O60422 494 aaPredicted RBP23.47■■□□□ 1.35
SAFB2-204ENST00000589925 EIF4G2P78344 907 aaKnown RBP eCLIP23.47■■□□□ 1.35
SAFB2-204ENST00000589925 NME9Q86XW9 330 aa23.47■■□□□ 1.35
SAFB2-204ENST00000589925 USP54Q70EL1 1684 aa23.47■■□□□ 1.35
SAFB2-204ENST00000589925 SPATA31A5Q5VU36 1347 aa23.46■■□□□ 1.35
SAFB2-204ENST00000589925 SPATA31A7Q8IWB4 1347 aa23.46■■□□□ 1.35
SAFB2-204ENST00000589925 ZRANB1Q9UGI0 708 aa23.46■■□□□ 1.35
SAFB2-204ENST00000589925 NFAT5O94916 1531 aa23.45■■□□□ 1.34
SAFB2-204ENST00000589925 HSPA5P11021 654 aaKnown RBP23.45■■□□□ 1.34
SAFB2-204ENST00000589925 KCNH5Q8NCM2 988 aa23.45■■□□□ 1.34
SAFB2-204ENST00000589925 AATKQ6ZMQ8 1374 aa23.44■■□□□ 1.34
SAFB2-204ENST00000589925 UPF1Q92900 1129 aaKnown RBP eCLIP23.43■■□□□ 1.34
SAFB2-204ENST00000589925 STRN4Q9NRL3 753 aa23.43■■□□□ 1.34
SAFB2-204ENST00000589925 ARHGEF25Q86VW2 580 aa23.42■■□□□ 1.34
SAFB2-204ENST00000589925 SEPT12Q8IYM1 358 aa23.42■■□□□ 1.34
SAFB2-204ENST00000589925 COL5A2P05997 1499 aaPredicted RBP23.42■■□□□ 1.34
SAFB2-204ENST00000589925 OVOS2A0A0J9YW53 1432 aa23.42■■□□□ 1.34
SAFB2-204ENST00000589925 OVOS2Q6IE36 1432 aa23.42■■□□□ 1.34
SAFB2-204ENST00000589925 MYOM1P52179 1685 aa23.41■■□□□ 1.34
SAFB2-204ENST00000589925 SPATA31A1Q5TZJ5 1347 aa23.41■■□□□ 1.34
SAFB2-204ENST00000589925 SOX12O15370 315 aa23.4■■□□□ 1.34
SAFB2-204ENST00000589925 FAM98CQ17RN3 349 aaKnown RBP23.4■■□□□ 1.34
SAFB2-204ENST00000589925 ZBTB7CA1YPR0 619 aa23.39■■□□□ 1.33
SAFB2-204ENST00000589925 EVA1CP58658 441 aa23.39■■□□□ 1.33
SAFB2-204ENST00000589925 COL18A1P39060 1754 aa23.39■■□□□ 1.33
SAFB2-204ENST00000589925 LARP1Q6PKG0 1096 aaKnown RBP23.38■■□□□ 1.33
SAFB2-204ENST00000589925 AXIN2Q9Y2T1 843 aa23.38■■□□□ 1.33
SAFB2-204ENST00000589925 THSD7AQ9UPZ6 1657 aa23.36■■□□□ 1.33
SAFB2-204ENST00000589925 ABCC6O95255 1503 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms