RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 C14orf93Q9H972 538 aaKnown RBP12.01□□□□□ -0.49
VAT1-207ENST00000589828 NRAPQ86VF7 1730 aa12□□□□□ -0.49
VAT1-207ENST00000589828 APBA3O96018 575 aa12□□□□□ -0.49
VAT1-207ENST00000589828 CFAP70Q5T0N1 1121 aa12□□□□□ -0.49
VAT1-207ENST00000589828 ABCA3Q99758 1704 aa12□□□□□ -0.49
VAT1-207ENST00000589828 FAM196AQ6ZSG2 479 aa11.99□□□□□ -0.49
VAT1-207ENST00000589828 SPATA31A1Q5TZJ5 1347 aa11.99□□□□□ -0.49
VAT1-207ENST00000589828 PRR36Q9H6K5 1346 aa11.99□□□□□ -0.49
VAT1-207ENST00000589828 KNDC1Q76NI1 1749 aa11.98□□□□□ -0.49
VAT1-207ENST00000589828 THSD7AQ9UPZ6 1657 aa11.98□□□□□ -0.49
VAT1-207ENST00000589828 ACIN1Q9UKV3 1341 aaKnown RBP11.98□□□□□ -0.49
VAT1-207ENST00000589828 ANKARQ7Z5J8 1434 aa11.97□□□□□ -0.49
VAT1-207ENST00000589828 CHRNA2Q15822 529 aa11.97□□□□□ -0.49
VAT1-207ENST00000589828 PRDM11Q9NQV5 511 aa11.97□□□□□ -0.49
VAT1-207ENST00000589828 RGPD1P0DJD0 1748 aa11.97□□□□□ -0.49
VAT1-207ENST00000589828 TNS1Q9HBL0 1735 aaKnown RBP11.97□□□□□ -0.49
VAT1-207ENST00000589828 DHX57Q6P158 1386 aaKnown RBP11.96□□□□□ -0.49
VAT1-207ENST00000589828 PARD3Q8TEW0 1356 aa11.96□□□□□ -0.49
VAT1-207ENST00000589828 HIRIP3Q9BW71 556 aaPredicted RBP11.96□□□□□ -0.49
VAT1-207ENST00000589828 STRN4Q9NRL3 753 aa11.96□□□□□ -0.49
VAT1-207ENST00000589828 GPRASP1Q5JY77 1395 aa11.95□□□□□ -0.5
VAT1-207ENST00000589828 KIAA0232Q92628 1395 aa11.95□□□□□ -0.5
VAT1-207ENST00000589828 POGKQ9P215 609 aa11.95□□□□□ -0.5
VAT1-207ENST00000589828 RGPD8O14715 1765 aaPredicted RBP11.95□□□□□ -0.5
VAT1-207ENST00000589828 COL14A1Q05707 1796 aaKnown RBP11.95□□□□□ -0.5
VAT1-207ENST00000589828 KCNQ2O43526 872 aa11.94□□□□□ -0.5
VAT1-207ENST00000589828 SPON1Q9HCB6 807 aa11.94□□□□□ -0.5
VAT1-207ENST00000589828 USP35Q9P2H5 1018 aa11.94□□□□□ -0.5
VAT1-207ENST00000589828 TRPM3Q9HCF6 1732 aaPredicted RBP11.94□□□□□ -0.5
VAT1-207ENST00000589828 PAK3O75914 559 aaPredicted RBP11.93□□□□□ -0.5
VAT1-207ENST00000589828 SLC4A2P04920 1241 aa11.93□□□□□ -0.5
VAT1-207ENST00000589828 NBPF8Q3BBV2 869 aa11.93□□□□□ -0.5
VAT1-207ENST00000589828 NBPF14Q5TI25 921 aa11.93□□□□□ -0.5
VAT1-207ENST00000589828 MPHOSPH9Q99550 1183 aa11.93□□□□□ -0.5
VAT1-207ENST00000589828 PPP1R1BQ9UD71 204 aaPredicted RBP11.93□□□□□ -0.5
VAT1-207ENST00000589828 IFT172Q9UG01 1749 aa11.93□□□□□ -0.5
VAT1-207ENST00000589828 ADGRB2O60241 1585 aa11.92□□□□□ -0.5
VAT1-207ENST00000589828 MINK1Q8N4C8 1332 aaPredicted RBP11.92□□□□□ -0.5
VAT1-207ENST00000589828 ALS2Q96Q42 1657 aa11.92□□□□□ -0.5
VAT1-207ENST00000589828 ZC3H6P61129 1189 aaKnown RBP11.92□□□□□ -0.5
VAT1-207ENST00000589828 BARGINQ6ZT62 677 aa11.92□□□□□ -0.5
VAT1-207ENST00000589828 NINLQ9Y2I6 1382 aa11.92□□□□□ -0.5
VAT1-207ENST00000589828 PDE3BQ13370 1112 aa11.91□□□□□ -0.5
VAT1-207ENST00000589828 NUTM2GQ5VZR2 741 aa11.91□□□□□ -0.5
VAT1-207ENST00000589828 NGDNQ8NEJ9 315 aaKnown RBP11.91□□□□□ -0.5
VAT1-207ENST00000589828 TRAK1Q9UPV9 953 aa11.91□□□□□ -0.5
VAT1-207ENST00000589828 WASLO00401 505 aaPredicted RBP11.9□□□□□ -0.5
VAT1-207ENST00000589828 ZBTB22O15209 634 aa11.9□□□□□ -0.5
VAT1-207ENST00000589828 LARP1Q6PKG0 1096 aaKnown RBP11.9□□□□□ -0.5
VAT1-207ENST00000589828 ZNF784Q8NCA9 323 aaPredicted RBP11.9□□□□□ -0.5
VAT1-207ENST00000589828 PDGFDQ9GZP0 370 aaPredicted RBP11.9□□□□□ -0.5
VAT1-207ENST00000589828 ANO8Q9HCE9 1232 aaPredicted RBP11.9□□□□□ -0.5
VAT1-207ENST00000589828 DLC1Q96QB1 1528 aa11.9□□□□□ -0.5
VAT1-207ENST00000589828 SSH2Q76I76 1423 aa11.89□□□□□ -0.51
VAT1-207ENST00000589828 RREB1Q92766 1687 aa11.88□□□□□ -0.51
VAT1-207ENST00000589828 PTF1AQ7RTS3 328 aa11.88□□□□□ -0.51
VAT1-207ENST00000589828 TCP11L2Q8N4U5 519 aa11.88□□□□□ -0.51
VAT1-207ENST00000589828 NUP188Q5SRE5 1749 aa11.88□□□□□ -0.51
VAT1-207ENST00000589828 CRYBG1Q9Y4K1 1723 aa11.88□□□□□ -0.51
VAT1-207ENST00000589828 TULP4Q9NRJ4 1543 aa11.87□□□□□ -0.51
VAT1-207ENST00000589828 EVA1CP58658 441 aa11.87□□□□□ -0.51
VAT1-207ENST00000589828 FOXD4L1Q9NU39 408 aa11.87□□□□□ -0.51
VAT1-207ENST00000589828 ADGRB1O14514 1584 aa11.87□□□□□ -0.51
VAT1-207ENST00000589828 PTGER2P43116 358 aa11.86□□□□□ -0.51
VAT1-207ENST00000589828 CAMTA1Q9Y6Y1 1673 aa11.86□□□□□ -0.51
VAT1-207ENST00000589828 EIF3AQ14152 1382 aaKnown RBP11.85□□□□□ -0.51
VAT1-207ENST00000589828 ZBTB7AO95365 584 aa11.85□□□□□ -0.51
VAT1-207ENST00000589828 PROM2Q8N271 834 aa11.85□□□□□ -0.51
VAT1-207ENST00000589828 NUDT16Q96DE0 195 aaKnown RBP11.85□□□□□ -0.51
VAT1-207ENST00000589828 ATP7BP35670 1465 aa11.83□□□□□ -0.52
VAT1-207ENST00000589828 SENP3-EIF4A1A0A087X0R7 540 aa11.83□□□□□ -0.52
VAT1-207ENST00000589828 PLSCR1O15162 318 aa11.83□□□□□ -0.52
VAT1-207ENST00000589828 ATF5Q9Y2D1 282 aaPredicted RBP11.83□□□□□ -0.52
VAT1-207ENST00000589828 THRAP3Q9Y2W1 955 aaKnown RBP11.83□□□□□ -0.52
VAT1-207ENST00000589828 CPDO75976 1380 aa11.82□□□□□ -0.52
VAT1-207ENST00000589828 USP19O94966 1318 aa11.82□□□□□ -0.52
VAT1-207ENST00000589828 ACEP12821 1306 aa11.82□□□□□ -0.52
VAT1-207ENST00000589828 NRKQ7Z2Y5 1582 aa11.81□□□□□ -0.52
VAT1-207ENST00000589828 C1QTNF8P60827 252 aa11.81□□□□□ -0.52
VAT1-207ENST00000589828 SYT17Q9BSW7 474 aa11.81□□□□□ -0.52
VAT1-207ENST00000589828 KDM2AQ9Y2K7 1162 aa11.81□□□□□ -0.52
VAT1-207ENST00000589828 POLR3AO14802 1390 aaPredicted RBP11.8□□□□□ -0.52
VAT1-207ENST00000589828 PHRF1Q9P1Y6 1649 aaKnown RBP11.8□□□□□ -0.52
VAT1-207ENST00000589828 GCP02774 474 aa11.8□□□□□ -0.52
VAT1-207ENST00000589828 ABTB2Q8N961 1025 aa11.8□□□□□ -0.52
VAT1-207ENST00000589828 CDK19Q9BWU1 502 aa11.8□□□□□ -0.52
VAT1-207ENST00000589828 FHDC1Q9C0D6 1143 aaPredicted RBP11.8□□□□□ -0.52
VAT1-207ENST00000589828 BCL11BQ9C0K0 894 aaPredicted RBP11.8□□□□□ -0.52
VAT1-207ENST00000589828 OVOS2A0A0G2JMS6 1433 aa11.79□□□□□ -0.52
VAT1-207ENST00000589828 OVOS2A0A0J9YW53 1432 aa11.79□□□□□ -0.52
VAT1-207ENST00000589828 OVOS2Q6IE36 1432 aa11.79□□□□□ -0.52
VAT1-207ENST00000589828 COL5A2P05997 1499 aaPredicted RBP11.79□□□□□ -0.52
VAT1-207ENST00000589828 PLEKHG3A1L390 1219 aa11.79□□□□□ -0.52
VAT1-207ENST00000589828 IFFO2Q5TF58 517 aa11.79□□□□□ -0.52
VAT1-207ENST00000589828 SGIP1Q9BQI5 828 aa11.79□□□□□ -0.52
VAT1-207ENST00000589828 LMO7Q8WWI1 1683 aa11.78□□□□□ -0.52
VAT1-207ENST00000589828 CASZ1Q86V15 1759 aa11.78□□□□□ -0.52
VAT1-207ENST00000589828 C11orf95C9JLR9 678 aaPredicted RBP11.78□□□□□ -0.52
VAT1-207ENST00000589828 MARCH10Q8NA82 808 aaPredicted RBP11.78□□□□□ -0.52
VAT1-207ENST00000589828 DDB1Q16531 1140 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms