RNA–Protein interactions for RNA: ENST00000589381.5

ERCC1-210, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-210ENST00000589381 USP6P35125 1406 aa25.69■■□□□ 1.7
ERCC1-210ENST00000589381 BRD4O60885 1362 aaPredicted RBP25.69■■□□□ 1.7
ERCC1-210ENST00000589381 PHF23Q9BUL5 403 aaPredicted RBP25.67■■□□□ 1.7
ERCC1-210ENST00000589381 SLC12A5Q9H2X9 1139 aa25.67■■□□□ 1.7
ERCC1-210ENST00000589381 MARF1Q9Y4F3 1742 aaKnown RBP25.67■■□□□ 1.7
ERCC1-210ENST00000589381 ABCA3Q99758 1704 aa25.66■■□□□ 1.7
ERCC1-210ENST00000589381 HDGFL2Q7Z4V5 671 aaPredicted RBP25.66■■□□□ 1.7
ERCC1-210ENST00000589381 TERF2IPQ9NYB0 399 aa25.66■■□□□ 1.7
ERCC1-210ENST00000589381 KTN1Q86UP2 1357 aaKnown RBP25.66■■□□□ 1.7
ERCC1-210ENST00000589381 CPSF1Q10570 1443 aaKnown RBP25.65■■□□□ 1.7
ERCC1-210ENST00000589381 PLEKHG5O94827 1062 aa25.65■■□□□ 1.7
ERCC1-210ENST00000589381 HAP1P54257 671 aaPredicted RBP25.65■■□□□ 1.7
ERCC1-210ENST00000589381 NRKQ7Z2Y5 1582 aa25.62■■□□□ 1.69
ERCC1-210ENST00000589381 CD163L1Q9NR16 1453 aa25.62■■□□□ 1.69
ERCC1-210ENST00000589381 ADAMTS2O95450 1211 aa25.62■■□□□ 1.69
ERCC1-210ENST00000589381 ABTB2Q8N961 1025 aa25.62■■□□□ 1.69
ERCC1-210ENST00000589381 POLR3GLQ9BT43 218 aa25.62■■□□□ 1.69
ERCC1-210ENST00000589381 MYOM1P52179 1685 aa25.61■■□□□ 1.69
ERCC1-210ENST00000589381 CABLES1Q8TDN4 633 aa25.6■■□□□ 1.69
ERCC1-210ENST00000589381 CRYBG1Q9Y4K1 1723 aa25.6■■□□□ 1.69
ERCC1-210ENST00000589381 A0A1W2PP64 1363 aa25.59■■□□□ 1.69
ERCC1-210ENST00000589381 NUTM2GQ5VZR2 741 aa25.59■■□□□ 1.69
ERCC1-210ENST00000589381 SSH2Q76I76 1423 aa25.59■■□□□ 1.69
ERCC1-210ENST00000589381 ZEB1P37275 1124 aaPredicted RBP25.58■■□□□ 1.69
ERCC1-210ENST00000589381 TTC21BQ7Z4L5 1316 aa25.58■■□□□ 1.69
ERCC1-210ENST00000589381 PIK3C2AO00443 1686 aa25.58■■□□□ 1.68
ERCC1-210ENST00000589381 PHRF1Q9P1Y6 1649 aaKnown RBP25.57■■□□□ 1.68
ERCC1-210ENST00000589381 C8orf37Q96NL8 207 aa25.57■■□□□ 1.68
ERCC1-210ENST00000589381 TTC21AQ8NDW8 1320 aa25.57■■□□□ 1.68
ERCC1-210ENST00000589381 ANKRD36BQ8N2N9 1353 aa25.56■■□□□ 1.68
ERCC1-210ENST00000589381 NLRP13Q86W25 1043 aa25.56■■□□□ 1.68
ERCC1-210ENST00000589381 EDC4Q6P2E9 1401 aaKnown RBP25.55■■□□□ 1.68
ERCC1-210ENST00000589381 NLRP6P59044 892 aa25.54■■□□□ 1.68
ERCC1-210ENST00000589381 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.54■■□□□ 1.68
ERCC1-210ENST00000589381 NGLY1Q96IV0 654 aa25.54■■□□□ 1.68
ERCC1-210ENST00000589381 C11orf95C9JLR9 678 aaPredicted RBP25.5■■□□□ 1.67
ERCC1-210ENST00000589381 AFF2P51816 1311 aa25.5■■□□□ 1.67
ERCC1-210ENST00000589381 USP19O94966 1318 aa25.49■■□□□ 1.67
ERCC1-210ENST00000589381 ZNF772Q68DY9 489 aaPredicted RBP25.48■■□□□ 1.67
ERCC1-210ENST00000589381 PLCH1Q4KWH8 1693 aa25.48■■□□□ 1.67
ERCC1-210ENST00000589381 USP54Q70EL1 1684 aa25.48■■□□□ 1.67
ERCC1-210ENST00000589381 KIF20BQ96Q89 1820 aa25.47■■□□□ 1.67
ERCC1-210ENST00000589381 RGS17Q9UGC6 210 aaPredicted RBP25.47■■□□□ 1.67
ERCC1-210ENST00000589381 COL14A1Q05707 1796 aaKnown RBP25.46■■□□□ 1.67
ERCC1-210ENST00000589381 KIF7Q2M1P5 1343 aa25.46■■□□□ 1.67
ERCC1-210ENST00000589381 NME9Q86XW9 330 aa25.46■■□□□ 1.67
ERCC1-210ENST00000589381 NWD2Q9ULI1 1742 aa25.46■■□□□ 1.67
ERCC1-210ENST00000589381 SLIT3O75094 1523 aa25.45■■□□□ 1.66
ERCC1-210ENST00000589381 GCP02774 474 aa25.44■■□□□ 1.66
ERCC1-210ENST00000589381 PRDM11Q9NQV5 511 aa25.44■■□□□ 1.66
ERCC1-210ENST00000589381 USP31Q70CQ4 1352 aa25.44■■□□□ 1.66
ERCC1-210ENST00000589381 ZC3H6P61129 1189 aaKnown RBP25.43■■□□□ 1.66
ERCC1-210ENST00000589381 FNBP4Q8N3X1 1017 aaPredicted RBP25.43■■□□□ 1.66
ERCC1-210ENST00000589381 USP21Q9UK80 565 aa25.43■■□□□ 1.66
ERCC1-210ENST00000589381 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.43■■□□□ 1.66
ERCC1-210ENST00000589381 KCNH5Q8NCM2 988 aa25.42■■□□□ 1.66
ERCC1-210ENST00000589381 NSD3Q9BZ95 1437 aa25.42■■□□□ 1.66
ERCC1-210ENST00000589381 KIAA0232Q92628 1395 aa25.42■■□□□ 1.66
ERCC1-210ENST00000589381 FAM83GA6ND36 823 aa25.41■■□□□ 1.66
ERCC1-210ENST00000589381 ZRANB1Q9UGI0 708 aa25.41■■□□□ 1.66
ERCC1-210ENST00000589381 SLIT2O94813 1529 aa25.4■■□□□ 1.66
ERCC1-210ENST00000589381 CCDC7Q96M83 1385 aa25.4■■□□□ 1.66
ERCC1-210ENST00000589381 SOX12O15370 315 aa25.39■■□□□ 1.66
ERCC1-210ENST00000589381 CARD14Q9BXL6 1004 aa25.39■■□□□ 1.66
ERCC1-210ENST00000589381 POTEAQ6S8J7 498 aa25.38■■□□□ 1.65
ERCC1-210ENST00000589381 COG3Q96JB2 828 aa25.38■■□□□ 1.65
ERCC1-210ENST00000589381 PANK3Q9H999 370 aa25.38■■□□□ 1.65
ERCC1-210ENST00000589381 CPDO75976 1380 aa25.38■■□□□ 1.65
ERCC1-210ENST00000589381 OVOS2A0A0J9YW53 1432 aa25.37■■□□□ 1.65
ERCC1-210ENST00000589381 OVOS2Q6IE36 1432 aa25.37■■□□□ 1.65
ERCC1-210ENST00000589381 LTN1O94822 1766 aa25.37■■□□□ 1.65
ERCC1-210ENST00000589381 WASHC2AQ641Q2 1341 aa25.37■■□□□ 1.65
ERCC1-210ENST00000589381 BCL9LQ86UU0 1499 aa25.36■■□□□ 1.65
ERCC1-210ENST00000589381 ZBTB7CA1YPR0 619 aa25.36■■□□□ 1.65
ERCC1-210ENST00000589381 CHRNA2Q15822 529 aa25.36■■□□□ 1.65
ERCC1-210ENST00000589381 UNC5CLQ8IV45 518 aa25.36■■□□□ 1.65
ERCC1-210ENST00000589381 QTRT2Q9H974 415 aaKnown RBP25.36■■□□□ 1.65
ERCC1-210ENST00000589381 NRAPQ86VF7 1730 aa25.35■■□□□ 1.65
ERCC1-210ENST00000589381 FYB1O15117 783 aa25.35■■□□□ 1.65
ERCC1-210ENST00000589381 BTG4Q9NY30 223 aa25.35■■□□□ 1.65
ERCC1-210ENST00000589381 TRPC5Q9UL62 973 aaPredicted RBP25.35■■□□□ 1.65
ERCC1-210ENST00000589381 NFAT5O94916 1531 aa25.35■■□□□ 1.65
ERCC1-210ENST00000589381 CGNL1Q0VF96 1302 aa25.35■■□□□ 1.65
ERCC1-210ENST00000589381 GGNBP2Q9H3C7 697 aa25.34■■□□□ 1.65
ERCC1-210ENST00000589381 ANKRD26Q9UPS8 1709 aa25.32■■□□□ 1.64
ERCC1-210ENST00000589381 RGPD5Q99666 1765 aa25.32■■□□□ 1.64
ERCC1-210ENST00000589381 ATRNO75882 1429 aa25.31■■□□□ 1.64
ERCC1-210ENST00000589381 LMO7Q8WWI1 1683 aa25.31■■□□□ 1.64
ERCC1-210ENST00000589381 RXRBP28702 533 aa25.3■■□□□ 1.64
ERCC1-210ENST00000589381 KNSTRNQ9Y448 316 aa25.3■■□□□ 1.64
ERCC1-210ENST00000589381 COL18A1P39060 1754 aa25.3■■□□□ 1.64
ERCC1-210ENST00000589381 ARHGEF25Q86VW2 580 aa25.29■■□□□ 1.64
ERCC1-210ENST00000589381 RBM6P78332 1123 aaKnown RBP25.28■■□□□ 1.64
ERCC1-210ENST00000589381 CCDC9Q9Y3X0 531 aaKnown RBP25.28■■□□□ 1.64
ERCC1-210ENST00000589381 AATKQ6ZMQ8 1374 aa25.28■■□□□ 1.64
ERCC1-210ENST00000589381 CAMTA1Q9Y6Y1 1673 aa25.27■■□□□ 1.64
ERCC1-210ENST00000589381 EVA1CP58658 441 aa25.27■■□□□ 1.64
ERCC1-210ENST00000589381 VPS72Q15906 364 aa25.26■■□□□ 1.63
ERCC1-210ENST00000589381 STRN4Q9NRL3 753 aa25.26■■□□□ 1.63
ERCC1-210ENST00000589381 MAP2P11137 1827 aaKnown RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms