RNA–Protein interactions for RNA: ENST00000589369.2

AP3D1-207, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 3

Gene AP3D1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-207ENST00000589369 SEPT12Q8IYM1 358 aa24.73■■□□□ 1.55
AP3D1-207ENST00000589369 CCDC9Q9Y3X0 531 aaKnown RBP24.72■■□□□ 1.55
AP3D1-207ENST00000589369 ONECUT3O60422 494 aaPredicted RBP24.71■■□□□ 1.55
AP3D1-207ENST00000589369 COL14A1Q05707 1796 aaKnown RBP24.71■■□□□ 1.55
AP3D1-207ENST00000589369 BTG4Q9NY30 223 aa24.7■■□□□ 1.54
AP3D1-207ENST00000589369 CCDC125Q86Z20 511 aa24.69■■□□□ 1.54
AP3D1-207ENST00000589369 POLR3AO14802 1390 aaPredicted RBP24.68■■□□□ 1.54
AP3D1-207ENST00000589369 CCDC61Q9Y6R9 512 aa24.68■■□□□ 1.54
AP3D1-207ENST00000589369 ACEP12821 1306 aa24.67■■□□□ 1.54
AP3D1-207ENST00000589369 L3MBTL2Q969R5 705 aa24.67■■□□□ 1.54
AP3D1-207ENST00000589369 PLEKHG3A1L390 1219 aa24.66■■□□□ 1.54
AP3D1-207ENST00000589369 NBPF8Q3BBV2 869 aa24.65■■□□□ 1.54
AP3D1-207ENST00000589369 SIN3AQ96ST3 1273 aa24.65■■□□□ 1.54
AP3D1-207ENST00000589369 PHRF1Q9P1Y6 1649 aaKnown RBP24.64■■□□□ 1.54
AP3D1-207ENST00000589369 CENPJQ9HC77 1338 aaPredicted RBP24.64■■□□□ 1.54
AP3D1-207ENST00000589369 BLMP54132 1417 aaPredicted RBP24.64■■□□□ 1.54
AP3D1-207ENST00000589369 NUTM2GQ5VZR2 741 aa24.63■■□□□ 1.53
AP3D1-207ENST00000589369 PRDM11Q9NQV5 511 aa24.63■■□□□ 1.53
AP3D1-207ENST00000589369 FAM98CQ17RN3 349 aaKnown RBP24.62■■□□□ 1.53
AP3D1-207ENST00000589369 KRT27Q7Z3Y8 459 aa24.62■■□□□ 1.53
AP3D1-207ENST00000589369 KIAA0232Q92628 1395 aa24.62■■□□□ 1.53
AP3D1-207ENST00000589369 QRICH2Q9H0J4 1663 aa24.62■■□□□ 1.53
AP3D1-207ENST00000589369 SRCAPQ6ZRS2 3230 aa24.61■■□□□ 1.53
AP3D1-207ENST00000589369 SPATA31A5Q5VU36 1347 aa24.61■■□□□ 1.53
AP3D1-207ENST00000589369 SPATA31A7Q8IWB4 1347 aa24.61■■□□□ 1.53
AP3D1-207ENST00000589369 SRPK2P78362 688 aaKnown RBP24.6■■□□□ 1.53
AP3D1-207ENST00000589369 CABP2Q9NPB3 220 aa24.6■■□□□ 1.53
AP3D1-207ENST00000589369 PPIP5K1Q6PFW1 1433 aa24.6■■□□□ 1.53
AP3D1-207ENST00000589369 A0A0G2JS52 829 aa24.59■■□□□ 1.53
AP3D1-207ENST00000589369 MYT1Q01538 1121 aa24.59■■□□□ 1.53
AP3D1-207ENST00000589369 CHRNA2Q15822 529 aa24.59■■□□□ 1.53
AP3D1-207ENST00000589369 TRPM1Q7Z4N2 1603 aa24.58■■□□□ 1.53
AP3D1-207ENST00000589369 ZC3H6P61129 1189 aaKnown RBP24.58■■□□□ 1.53
AP3D1-207ENST00000589369 DEFB132Q7Z7B7 95 aa24.58■■□□□ 1.53
AP3D1-207ENST00000589369 NEUROD1Q13562 356 aa24.57■■□□□ 1.52
AP3D1-207ENST00000589369 ZRANB1Q9UGI0 708 aa24.57■■□□□ 1.52
AP3D1-207ENST00000589369 NRKQ7Z2Y5 1582 aa24.56■■□□□ 1.52
AP3D1-207ENST00000589369 ABTB2Q8N961 1025 aa24.55■■□□□ 1.52
AP3D1-207ENST00000589369 THSD7AQ9UPZ6 1657 aa24.55■■□□□ 1.52
AP3D1-207ENST00000589369 USP19O94966 1318 aa24.54■■□□□ 1.52
AP3D1-207ENST00000589369 SPATA31A1Q5TZJ5 1347 aa24.53■■□□□ 1.52
AP3D1-207ENST00000589369 STRN4Q9NRL3 753 aa24.52■■□□□ 1.52
AP3D1-207ENST00000589369 SF3B2Q13435 895 aaKnown RBP24.51■■□□□ 1.51
AP3D1-207ENST00000589369 CABP1Q9NZU7 370 aa24.51■■□□□ 1.51
AP3D1-207ENST00000589369 FAM182BQ5T319 152 aa24.5■■□□□ 1.51
AP3D1-207ENST00000589369 ROCK2O75116 1388 aaKnown RBP24.5■■□□□ 1.51
AP3D1-207ENST00000589369 CAMTA1Q9Y6Y1 1673 aa24.5■■□□□ 1.51
AP3D1-207ENST00000589369 CPDO75976 1380 aa24.49■■□□□ 1.51
AP3D1-207ENST00000589369 USP6P35125 1406 aa24.49■■□□□ 1.51
AP3D1-207ENST00000589369 SSH2Q76I76 1423 aa24.48■■□□□ 1.51
AP3D1-207ENST00000589369 LMO7Q8WWI1 1683 aa24.48■■□□□ 1.51
AP3D1-207ENST00000589369 BRD4O60885 1362 aaPredicted RBP24.47■■□□□ 1.51
AP3D1-207ENST00000589369 NLRP13Q86W25 1043 aa24.47■■□□□ 1.51
AP3D1-207ENST00000589369 EVC2Q86UK5 1308 aa24.46■■□□□ 1.51
AP3D1-207ENST00000589369 GCP02774 474 aa24.46■■□□□ 1.51
AP3D1-207ENST00000589369 LARP1Q6PKG0 1096 aaKnown RBP24.44■■□□□ 1.5
AP3D1-207ENST00000589369 EVA1CP58658 441 aa24.43■■□□□ 1.5
AP3D1-207ENST00000589369 USP35Q9P2H5 1018 aa24.43■■□□□ 1.5
AP3D1-207ENST00000589369 RGPD1P0DJD0 1748 aa24.41■■□□□ 1.5
AP3D1-207ENST00000589369 SLIT3O75094 1523 aa24.41■■□□□ 1.5
AP3D1-207ENST00000589369 PIK3C2AO00443 1686 aa24.41■■□□□ 1.5
AP3D1-207ENST00000589369 BAG6P46379 1132 aa24.41■■□□□ 1.5
AP3D1-207ENST00000589369 NLRP6P59044 892 aa24.4■■□□□ 1.5
AP3D1-207ENST00000589369 BARGINQ6ZT62 677 aa24.4■■□□□ 1.5
AP3D1-207ENST00000589369 TNS1Q9HBL0 1735 aaKnown RBP24.39■■□□□ 1.5
AP3D1-207ENST00000589369 COL5A2P05997 1499 aaPredicted RBP24.38■■□□□ 1.49
AP3D1-207ENST00000589369 EN1Q05925 392 aaPredicted RBP24.38■■□□□ 1.49
AP3D1-207ENST00000589369 AKAP12Q02952 1782 aa24.37■■□□□ 1.49
AP3D1-207ENST00000589369 TCP11L2Q8N4U5 519 aa24.37■■□□□ 1.49
AP3D1-207ENST00000589369 TTC21BQ7Z4L5 1316 aa24.35■■□□□ 1.49
AP3D1-207ENST00000589369 DISP2A7MBM2 1401 aa24.35■■□□□ 1.49
AP3D1-207ENST00000589369 ZBTB7CA1YPR0 619 aa24.35■■□□□ 1.49
AP3D1-207ENST00000589369 AATKQ6ZMQ8 1374 aa24.34■■□□□ 1.49
AP3D1-207ENST00000589369 FAM196AQ6ZSG2 479 aa24.34■■□□□ 1.49
AP3D1-207ENST00000589369 ZNF692Q9BU19 519 aaPredicted RBP24.34■■□□□ 1.49
AP3D1-207ENST00000589369 CPSF1Q10570 1443 aaKnown RBP24.34■■□□□ 1.49
AP3D1-207ENST00000589369 COL18A1P39060 1754 aa24.34■■□□□ 1.49
AP3D1-207ENST00000589369 SBNO2Q9Y2G9 1366 aa24.33■■□□□ 1.49
AP3D1-207ENST00000589369 TRIM37O94972 964 aa24.33■■□□□ 1.49
AP3D1-207ENST00000589369 CARD11Q9BXL7 1154 aa24.33■■□□□ 1.49
AP3D1-207ENST00000589369 THRAP3Q9Y2W1 955 aaKnown RBP24.32■■□□□ 1.48
AP3D1-207ENST00000589369 PSDA5PKW4 1024 aaPredicted RBP24.31■■□□□ 1.48
AP3D1-207ENST00000589369 CRB1P82279 1406 aa24.31■■□□□ 1.48
AP3D1-207ENST00000589369 PDE3BQ13370 1112 aa24.31■■□□□ 1.48
AP3D1-207ENST00000589369 PARP4Q9UKK3 1724 aaKnown RBP24.3■■□□□ 1.48
AP3D1-207ENST00000589369 TONSLQ96HA7 1378 aa24.29■■□□□ 1.48
AP3D1-207ENST00000589369 EZH2Q15910 746 aaKnown RBP24.29■■□□□ 1.48
AP3D1-207ENST00000589369 AXIN2Q9Y2T1 843 aa24.29■■□□□ 1.48
AP3D1-207ENST00000589369 TTC21AQ8NDW8 1320 aa24.29■■□□□ 1.48
AP3D1-207ENST00000589369 KTN1Q86UP2 1357 aaKnown RBP24.29■■□□□ 1.48
AP3D1-207ENST00000589369 MON2Q7Z3U7 1717 aa24.28■■□□□ 1.48
AP3D1-207ENST00000589369 ARHGEF25Q86VW2 580 aa24.27■■□□□ 1.48
AP3D1-207ENST00000589369 CAMKK2Q96RR4 588 aa24.27■■□□□ 1.48
AP3D1-207ENST00000589369 CD163L1Q9NR16 1453 aa24.26■■□□□ 1.47
AP3D1-207ENST00000589369 SOX12O15370 315 aa24.26■■□□□ 1.47
AP3D1-207ENST00000589369 NFAT5O94916 1531 aa24.25■■□□□ 1.47
AP3D1-207ENST00000589369 APBA3O96018 575 aa24.25■■□□□ 1.47
AP3D1-207ENST00000589369 KCNH5Q8NCM2 988 aa24.25■■□□□ 1.47
AP3D1-207ENST00000589369 LRP5O75197 1615 aa24.24■■□□□ 1.47
AP3D1-207ENST00000589369 TOM1L2Q6ZVM7 507 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms