RNA–Protein interactions for RNA: ENST00000588582.3

LSM14A-206, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-206ENST00000588582 RUNDC1Q96C34 613 aa12.64□□□□□ -0.39
LSM14A-206ENST00000588582 GTF2A1P52655 376 aaPredicted RBP12.64□□□□□ -0.39
LSM14A-206ENST00000588582 CAMK4Q16566 473 aa12.64□□□□□ -0.39
LSM14A-206ENST00000588582 NOL10Q9BSC4 688 aaKnown RBP12.64□□□□□ -0.39
LSM14A-206ENST00000588582 TRIM27P14373 513 aa12.63□□□□□ -0.39
LSM14A-206ENST00000588582 HOMER1Q86YM7 354 aa12.63□□□□□ -0.39
LSM14A-206ENST00000588582 PATL2C9JE40 543 aaKnown RBP12.63□□□□□ -0.39
LSM14A-206ENST00000588582 INTS3Q68E01 1043 aaKnown RBP12.63□□□□□ -0.39
LSM14A-206ENST00000588582 FILIP1Q7Z7B0 1213 aa12.63□□□□□ -0.39
LSM14A-206ENST00000588582 GOLGA6L1Q8N7Z2 621 aa12.63□□□□□ -0.39
LSM14A-206ENST00000588582 ATF7IPQ6VMQ6 1270 aa12.63□□□□□ -0.39
LSM14A-206ENST00000588582 CWC22Q9HCG8 908 aaKnown RBP12.63□□□□□ -0.39
LSM14A-206ENST00000588582 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.63□□□□□ -0.39
LSM14A-206ENST00000588582 DISP3Q9P2K9 1392 aa12.63□□□□□ -0.39
LSM14A-206ENST00000588582 PTGS1P23219 599 aa12.62□□□□□ -0.39
LSM14A-206ENST00000588582 FEZ1Q99689 392 aa12.62□□□□□ -0.39
LSM14A-206ENST00000588582 RSPH14Q9UHP6 348 aa12.62□□□□□ -0.39
LSM14A-206ENST00000588582 SSH1Q8WYL5 1049 aa12.62□□□□□ -0.39
LSM14A-206ENST00000588582 ZNF692Q9BU19 519 aaPredicted RBP12.62□□□□□ -0.39
LSM14A-206ENST00000588582 REC8O95072 547 aa12.62□□□□□ -0.39
LSM14A-206ENST00000588582 GPS2Q13227 327 aa12.62□□□□□ -0.39
LSM14A-206ENST00000588582 GOLGA6L19H0YKK7 550 aa12.61□□□□□ -0.39
LSM14A-206ENST00000588582 HNRNPMP52272 730 aaKnown RBP eCLIP12.61□□□□□ -0.39
LSM14A-206ENST00000588582 CCDC186Q7Z3E2 898 aa12.61□□□□□ -0.39
LSM14A-206ENST00000588582 ANKRD30AQ9BXX3 1397 aa12.61□□□□□ -0.39
LSM14A-206ENST00000588582 PYCARDQ9ULZ3 195 aa12.6□□□□□ -0.39
LSM14A-206ENST00000588582 FYCO1Q9BQS8 1478 aa12.6□□□□□ -0.39
LSM14A-206ENST00000588582 IBSPP21815 317 aaPredicted RBP12.6□□□□□ -0.39
LSM14A-206ENST00000588582 MTHFSP49914 203 aa12.6□□□□□ -0.39
LSM14A-206ENST00000588582 BECN2A8MW95 431 aa12.59□□□□□ -0.39
LSM14A-206ENST00000588582 GADD45BO75293 160 aaPredicted RBP12.59□□□□□ -0.39
LSM14A-206ENST00000588582 FAM177A1Q8N128 213 aaPredicted RBP12.59□□□□□ -0.39
LSM14A-206ENST00000588582 FAM184AQ8NB25 1140 aa12.59□□□□□ -0.39
LSM14A-206ENST00000588582 SMARCA5O60264 1052 aaPredicted RBP12.59□□□□□ -0.39
LSM14A-206ENST00000588582 SLC4A10Q6U841 1118 aa12.59□□□□□ -0.39
LSM14A-206ENST00000588582 CKAP2LQ8IYA6 745 aa12.59□□□□□ -0.39
LSM14A-206ENST00000588582 PLEKHH2Q8IVE3 1493 aa12.59□□□□□ -0.39
LSM14A-206ENST00000588582 NRDCO43847 1150 aa12.58□□□□□ -0.39
LSM14A-206ENST00000588582 MNS1Q8NEH6 495 aa12.58□□□□□ -0.39
LSM14A-206ENST00000588582 KIAA1107Q9UPP5 1409 aa12.58□□□□□ -0.4
LSM14A-206ENST00000588582 GABPB1Q06547 395 aaPredicted RBP12.58□□□□□ -0.4
LSM14A-206ENST00000588582 SECISBP2LQ93073 1101 aaKnown RBP12.58□□□□□ -0.4
LSM14A-206ENST00000588582 SYTL4Q96C24 671 aaPredicted RBP12.58□□□□□ -0.4
LSM14A-206ENST00000588582 PDLIM2Q96JY6 352 aa12.58□□□□□ -0.4
LSM14A-206ENST00000588582 TOP2BQ02880 1626 aa12.58□□□□□ -0.4
LSM14A-206ENST00000588582 CCDC144AA2RUR9 1427 aa12.58□□□□□ -0.4
LSM14A-206ENST00000588582 USP48Q86UV5 1035 aa12.57□□□□□ -0.4
LSM14A-206ENST00000588582 NEK11Q8NG66 645 aa12.57□□□□□ -0.4
LSM14A-206ENST00000588582 ZNF526Q8TF50 670 aaPredicted RBP12.57□□□□□ -0.4
LSM14A-206ENST00000588582 ST7Q9NRC1 585 aa12.57□□□□□ -0.4
LSM14A-206ENST00000588582 BMP2KLQ5H9B9 411 aa12.57□□□□□ -0.4
LSM14A-206ENST00000588582 TDRD9Q8NDG6 1382 aaKnown RBP12.57□□□□□ -0.4
LSM14A-206ENST00000588582 LRMPQ12912 555 aa12.56□□□□□ -0.4
LSM14A-206ENST00000588582 BICD2Q8TD16 824 aa12.56□□□□□ -0.4
LSM14A-206ENST00000588582 PTPN14Q15678 1187 aa12.56□□□□□ -0.4
LSM14A-206ENST00000588582 CCDC183Q5T5S1 534 aa12.56□□□□□ -0.4
LSM14A-206ENST00000588582 NINLQ9Y2I6 1382 aa12.56□□□□□ -0.4
LSM14A-206ENST00000588582 TPM3P06753 285 aa12.56□□□□□ -0.4
LSM14A-206ENST00000588582 ELF2Q15723 593 aa12.56□□□□□ -0.4
LSM14A-206ENST00000588582 TTLL5Q6EMB2 1281 aa12.56□□□□□ -0.4
LSM14A-206ENST00000588582 FERMT3Q86UX7 667 aa12.56□□□□□ -0.4
LSM14A-206ENST00000588582 C16orf71Q8IYS4 520 aaPredicted RBP12.56□□□□□ -0.4
LSM14A-206ENST00000588582 TSPYL1Q9H0U9 437 aa12.56□□□□□ -0.4
LSM14A-206ENST00000588582 CNPY2Q9Y2B0 182 aa12.56□□□□□ -0.4
LSM14A-206ENST00000588582 CCDC192P0DO97 292 aa12.55□□□□□ -0.4
LSM14A-206ENST00000588582 CEP135Q66GS9 1140 aa12.55□□□□□ -0.4
LSM14A-206ENST00000588582 SMC3Q9UQE7 1217 aa12.55□□□□□ -0.4
LSM14A-206ENST00000588582 KDM5BQ9UGL1 1544 aa12.55□□□□□ -0.4
LSM14A-206ENST00000588582 CCDC191Q8NCU4 936 aa12.55□□□□□ -0.4
LSM14A-206ENST00000588582 DRC1Q96MC2 740 aa12.55□□□□□ -0.4
LSM14A-206ENST00000588582 CWC15Q9P013 229 aaKnown RBP12.55□□□□□ -0.4
LSM14A-206ENST00000588582 ZMYM4Q5VZL5 1548 aa12.55□□□□□ -0.4
LSM14A-206ENST00000588582 ERBINQ96RT1 1412 aa12.55□□□□□ -0.4
LSM14A-206ENST00000588582 FOSBP53539 338 aa12.55□□□□□ -0.4
LSM14A-206ENST00000588582 NUCB1Q02818 461 aa12.55□□□□□ -0.4
LSM14A-206ENST00000588582 CFAP44Q96MT7 982 aa12.55□□□□□ -0.4
LSM14A-206ENST00000588582 RASSF4Q9H2L5 321 aa12.55□□□□□ -0.4
LSM14A-206ENST00000588582 ARGLU1Q9NWB6 273 aaPredicted RBP12.55□□□□□ -0.4
LSM14A-206ENST00000588582 LMAN1P49257 510 aa12.54□□□□□ -0.4
LSM14A-206ENST00000588582 TSHZ3Q63HK5 1081 aa12.54□□□□□ -0.4
LSM14A-206ENST00000588582 KRBA2Q6ZNG9 492 aa12.54□□□□□ -0.4
LSM14A-206ENST00000588582 FMNL2Q96PY5 1086 aa12.54□□□□□ -0.4
LSM14A-206ENST00000588582 DEF6Q9H4E7 631 aa12.54□□□□□ -0.4
LSM14A-206ENST00000588582 TEX14Q8IWB6 1497 aa12.54□□□□□ -0.4
LSM14A-206ENST00000588582 FKBP5Q13451 457 aaPredicted RBP12.54□□□□□ -0.4
LSM14A-206ENST00000588582 NOM1Q5C9Z4 860 aaKnown RBP12.54□□□□□ -0.4
LSM14A-206ENST00000588582 TMX3Q96JJ7 454 aa12.54□□□□□ -0.4
LSM14A-206ENST00000588582 HDAC5Q9UQL6 1122 aa12.54□□□□□ -0.4
LSM14A-206ENST00000588582 PLEKHD1A6NEE1 506 aa12.53□□□□□ -0.4
LSM14A-206ENST00000588582 KDM4AO75164 1064 aa12.53□□□□□ -0.4
LSM14A-206ENST00000588582 DDX54Q8TDD1 881 aaKnown RBP12.53□□□□□ -0.4
LSM14A-206ENST00000588582 HNRNPH2P55795 449 aaKnown RBP12.53□□□□□ -0.4
LSM14A-206ENST00000588582 TERF2Q15554 542 aa12.53□□□□□ -0.4
LSM14A-206ENST00000588582 CEBPZQ03701 1054 aaKnown RBP12.52□□□□□ -0.4
LSM14A-206ENST00000588582 ATAD2BQ9ULI0 1458 aa12.52□□□□□ -0.4
LSM14A-206ENST00000588582 BLMP54132 1417 aaPredicted RBP12.52□□□□□ -0.4
LSM14A-206ENST00000588582 NCBP1Q09161 790 aaKnown RBP12.52□□□□□ -0.4
LSM14A-206ENST00000588582 TRAK1Q9UPV9 953 aa12.52□□□□□ -0.4
LSM14A-206ENST00000588582 LRRFIP2Q9Y608 721 aaKnown RBP12.52□□□□□ -0.4
LSM14A-206ENST00000588582 LOC102724159A0A0B4J2E5 919 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms